Nuclear Magnetic Resonance Controlled Vocabulary
Names
More detailed information about this field from each metasource.
Nuclear Magnetic Resonance Controlled Vocabulary
metasource: Fairsharing.org
version: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
nmrCV
metasource: Fairsharing.org
version: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
NMR-Controlled Vocabulary
metasource: Biontology / Bioportal
version: 1.1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/NMR
NMR
metasource: Biontology / Bioportal
version: 1.1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/NMR
Names
More detailed information about this field from each metasource.
Nuclear Magnetic Resonance Controlled Vocabulary
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
nmrCV
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
NMR-Controlled Vocabulary
metasource: Biontology / Bioportalversion: 1.1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/NMR
NMR
metasource: Biontology / Bioportalversion: 1.1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/NMR
Other names: nmrCV, NMR-Controlled Vocabulary, NMR
Names
More detailed information about this field from each metasource.
Nuclear Magnetic Resonance Controlled Vocabulary
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
nmrCV
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
NMR-Controlled Vocabulary
metasource: Biontology / Bioportalversion: 1.1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/NMR
NMR
metasource: Biontology / Bioportalversion: 1.1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/NMR
nmrCV is a MSI-sanctioned NMR controlled vocabulary, created within the COSMOS EU project, to support the nmrML data standard for nuclear magnetic resonance data in metabolomics with standardized meaningful data descriptors. This CV is the successor of the (now deprecated) 'NMR-instrument specific component of metabolomics investigations' CV of 2006. This standard is currently financed via the PhenoMeNal EU project. It is a simple taxonomy build according to the same design principles as its role model artefact, the Mass Spec CV of PSI.
Description
More detailed information about this field from each metasource.
nmrCV is a MSI-sanctioned NMR controlled vocabulary, created within the COSMOS EU project, to support the nmrML data standard for nuclear magnetic resonance data in metabolomics with standardized meaningful data descriptors. This CV is the successor of the (now deprecated) 'NMR-instrument specific component of metabolomics investigations' CV of 2006. This standard is currently financed via the PhenoMeNal EU project. It is a simple taxonomy build according to the same design principles as its role model artefact, the Mass Spec CV of PSI.
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
This is the new msi-sanctioned nmr CV, created within the COSMOS EU project, to support the nmrML data standard for nuclear magnetic resonance data in metabolomics with meaningful raw data descriptors.
metasource: Biontology / Bioportalversion: 1.1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/NMR
Webpage:
http://www.nmrML.orgWebpage
More detailed information about this field from each metasource.
http://www.nmrML.org
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
http://nmrml.org/cv/
metasource: Biontology / Bioportalversion: 1.1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/NMR
Licence:
Name: Creative Commons CC0 1.0 Universal (CC0 1.0) Public Domain DedicationLicence name
More detailed information about this field from each metasource.
Creative Commons CC0 1.0 Universal (CC0 1.0) Public Domain Dedication
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
Licence URL
More detailed information about this field from each metasource.
https://creativecommons.org/publicdomain/zero/1.0/
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
The metabolomics standards initiative
PMID: 17687353
metasource: Fairsharing.org
version: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
http://identifiers.org/pubmed/PMID: 29035042?resource=MIR:00100023
metasource: Fairsharing.org
version: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
Publications
More detailed information about this field from each metasource.
The metabolomics standards initiative
PMID: 17687353
metasource: Fairsharing.org
version: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
http://identifiers.org/pubmed/PMID: 29035042?resource=MIR:00100023
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
-
The metabolomics standards initiative
PubMed citations: 102.
102 articles citing: The metabolomics standards initiative
Gas Chromatography-Mass Spectroscopy-Based Metabolomics Analysis Reveals Potential Biochemical Markers for Diagnosis of Gestational Diabetes Mellitus. PMID:34867398
Lipid Signaling Modulates the Response to Fumonisin Contamination and Its Source, Fusarium verticillioides, in Maize. PMID:34819936
Prenatal exposure to poly-/per-fluoroalkyl substances is associated with alteration of lipid profiles in cord-blood. PMID:34816353
The Metabolic Signature of Cardiorespiratory Fitness: A Systematic Review. PMID:34757595
Defining NASH from a Multi-Omics Systems Biology Perspective. PMID:34682795
A Metabolomics Investigation of the Metabolic Changes of Raji B Lymphoma Cells Undergoing Apoptosis Induced by Zinc Ions. PMID:34677404
Large dependency of intracellular NAD and CoA pools on cultivation conditions in Saccharomyces cerevisiae. PMID:34556160
Mass spectrometry-based metabolomics: a guide for annotation, quantification and best reporting practices. PMID:34239102
Intermittent Hypoxia and Hypercapnia Alter Diurnal Rhythms of Luminal Gut Microbiome and Metabolome. PMID:34184915
Impact of Plant Growth-Promoting Rhizobacteria Inoculation and Grafting on Tolerance of Tomato to Combined Water and Nutrient Stress Assessed via Metabolomics Analysis. PMID:34149768
Benchmarking Non-Targeted Metabolomics Using Yeast-Derived Libraries. PMID:33802096
Discrepancies in metabolomic biomarker identification from patient-derived lung cancer revealed by combined variation in data pre-treatment and imputation methods. PMID:33772663
Adaptation of central metabolite pools to variations in growth rate and cultivation conditions in Saccharomyces cerevisiae. PMID:33750414
Untargeted Metabolomic Analysis Combined With Multivariate Statistics Reveal Distinct Metabolic Changes in GPR40 Agonist-Treated Animals Related to Bile Acid Metabolism. PMID:33521051
Fine-tuning autophagy maximises lifespan and is associated with changes in mitochondrial gene expression in Drosophila. PMID:33253201
Recurrent Topics in Mass Spectrometry-Based Metabolomics and Lipidomics-Standardization, Coverage, and Throughput. PMID:33249827
Predicting human health from biofluid-based metabolomics using machine learning. PMID:33077825
Characterization of plasma lipidomics in adolescent subjects with increased risk for type 1 diabetes in the DiPiS cohort. PMID:33033923
MetaboShiny: interactive analysis and metabolite annotation of mass spectrometry-based metabolomics data. PMID:32915321
Community standards for open cell migration data. PMID:32396199
Commentary: Metabolomics-Based Studies Assessing Exercise-Induced Alterations of the Human Metabolome: A Systematic Review. PMID:32390864
The metabolome as a link in the genotype-phenotype map for peroxide resistance in the fruit fly, Drosophila melanogaster. PMID:32366330
Synbiotic supplementation with prebiotic green banana resistant starch and probiotic Bacillus coagulans spores ameliorates gut inflammation in mouse model of inflammatory bowel diseases. PMID:32067099
Emerging Insights into the Metabolic Alterations in Aging Using Metabolomics. PMID:31847272
Metabolomic identification of novel diagnostic biomarkers in ectopic pregnancy. PMID:31630278
Influence of Human Activities on Broad-Scale Estuarine-Marine Habitats Using Omics-Based Approaches Applied to Marine Sediments. PMID:31590307
Methods and Challenges for Computational Data Analysis for DNA Adductomics. PMID:31549505
MitoPark transgenic mouse model recapitulates the gastrointestinal dysfunction and gut-microbiome changes of Parkinson's disease. PMID:31505196
Biomarkers of Acute Lung Injury The Individualized Approach: for Phenotyping, Risk Stratification and Treatment Surveillance. PMID:31382587
Toward Mass Spectrometry Imaging in the Metabolomics Scale: Increasing Metabolic Coverage Through Multiple On-Tissue Chemical Modifications. PMID:31354754
Lactobacillus acidophilus DDS-1 Modulates Intestinal-Specific Microbiota, Short-Chain Fatty Acid and Immunological Profiles in Aging Mice. PMID:31181695
Translational Metabolomics: Current Challenges and Future Opportunities. PMID:31174372
Nutritional Metabolomics in Cancer Epidemiology: Current Trends, Challenges, and Future Directions. PMID:31129888
Mass Spectrometry-Based Integration and Expansion of the Chemical Diversity Harbored Within a Marine Sponge. PMID:31093948
Synbiotic Supplementation Containing Whole Plant Sugar Cane Fibre and Probiotic Spores Potentiates Protective Synergistic Effects in Mouse Model of IBD. PMID:30979002
mzTab-M: A Data Standard for Sharing Quantitative Results in Mass Spectrometry Metabolomics. PMID:30688441
Lactobacillus acidophilus DDS-1 Modulates the Gut Microbiota and Improves Metabolic Profiles in Aging Mice. PMID:30200669
Are microbiome studies ready for hypothesis-driven research? PMID:30059804
Associations of maternal type 1 diabetes with childhood adiposity and metabolic health in the offspring: a prospective cohort study. PMID:30008062
The value of universally available raw NMR data for transparency, reproducibility, and integrity in natural product research. PMID:30003207
When Transcriptomics and Metabolomics Work Hand in Hand: A Case Study Characterizing Plant CDF Transcription Factors. PMID:29495643
Serum metabolome changes in adult patients with severe dengue in the critical and recovery phases of dengue infection. PMID:29364889
Best practices and lessons learned from reuse of 4 patient-derived metabolomics datasets in Alzheimer's disease. PMID:29218889
Metabolomics for the masses: The future of metabolomics in a personalized world. PMID:29094062
Compliance with minimum information guidelines in public metabolomics repositories. PMID:28949328
Metabolomics based markers predict type 2 diabetes in a 14-year follow-up study. PMID:28804275
Does the 1H-NMR plasma metabolome reflect the host-tumor interactions in human breast cancer? PMID:28611296
Serum Metabolomics Investigation of Humanized Mouse Model of Dengue Virus Infection. PMID:28468882
mzML2ISA & nmrML2ISA: generating enriched ISA-Tab metadata files from metabolomics XML data. PMID:28402395
Renal Medulla is More Sensitive to Cisplatin than Cortex Revealed by Untargeted Mass Spectrometry-Based Metabolomics in Rats. PMID:28300186
compMS2Miner: An Automatable Metabolite Identification, Visualization, and Data-Sharing R Package for High-Resolution LC-MS Data Sets. PMID:28225587
Metabolic profiling of presymptomatic Huntington's disease sheep reveals novel biomarkers. PMID:28223686
Global open data management in metabolomics. PMID:28092796
Genome, transcriptome and proteome: the rise of omics data and their integration in biomedical sciences. PMID:27881428
The metabolome 18 years on: a concept comes of age. PMID:27695392
Holistic Analysis Enhances the Description of Metabolic Complexity in Dietary Natural Products. PMID:27180381
Toward a Predictive Understanding of Earth's Microbiomes to Address 21st Century Challenges. PMID:27178263
Metabolomics: an emerging but powerful tool for precision medicine. PMID:27148576
The Ontology for Biomedical Investigations. PMID:27128319
Serum Metabolomics Reveals Serotonin as a Predictor of Severe Dengue in the Early Phase of Dengue Fever. PMID:27055163
Data standards can boost metabolomics research, and if there is a will, there is a way. PMID:26612985
Metabolomic changes during cellular transformation monitored by metabolite-metabolite correlation analysis and correlated with gene expression. PMID:26491426
Gender-specific pathway differences in the human serum metabolome. PMID:26491425
COordination of Standards in MetabOlomicS (COSMOS): facilitating integrated metabolomics data access. PMID:26491418
The ABRF Metabolomics Research Group 2013 Study: Investigation of Spiked Compound Differences in a Human Plasma Matrix. PMID:26290656
Analysis of Metabolomics Datasets with High-Performance Computing and Metabolite Atlases. PMID:26287255
Molecular pathways: trafficking of metabolic resources in the tumor microenvironment. PMID:25691772
A comprehensive workflow of mass spectrometry-based untargeted metabolomics in cancer metabolic biomarker discovery using human plasma and urine. PMID:24958150
Mathematical modeling of plant metabolism-from reconstruction to prediction. PMID:24957647
Quantitative HPLC-MS analysis of nucleotide sugars in plant cells following off-line SPE sample preparation. PMID:24633587
The current state of drug discovery and a potential role for NMR metabolomics. PMID:24588729
Physiological and growth responses to water deficit in the bioenergy crop Miscanthus x giganteus. PMID:24324474
Cell metabolomics. PMID:23988149
Silencing an N-acyltransferase-like involved in lignin biosynthesis in Nicotiana attenuata dramatically alters herbivory-induced phenolamide metabolism. PMID:23704878
Dissemination of metabolomics results: role of MetaboLights and COSMOS. PMID:23683662
The MetaboLights repository: curation challenges in metabolomics. PMID:23630246
Recent progress in the development of metabolome databases for plant systems biology. PMID:23577015
The HUPO proteomics standards initiative- mass spectrometry controlled vocabulary. PMID:23482073
Computational mass spectrometry for small molecules. PMID:23453222
MetaboLights--an open-access general-purpose repository for metabolomics studies and associated meta-data. PMID:23109552
Remodeling of central metabolism in invasive breast cancer compared to normal breast tissue - a GC-TOFMS based metabolomics study. PMID:22823888
Nutritional metabolomics: progress in addressing complexity in diet and health. PMID:22540256
Bioinformatics tools for cancer metabolomics. PMID:21949492
A Metadata description of the data in "A metabolomic comparison of urinary changes in type 2 diabetes in mouse, rat, and human.". PMID:21801423
MeRy-B: a web knowledgebase for the storage, visualization, analysis and annotation of plant NMR metabolomic profiles. PMID:21668943
Metabolomics, pathway regulation, and pathway discovery. PMID:21566142
Unpredictability of metabolism--the key role of metabolomics science in combination with next-generation genome sequencing. PMID:21556754
Data standards for Omics data: the basis of data sharing and reuse. PMID:21370078
Towards interoperable reporting standards for omics data: hopes and hurdles. PMID:21347181
Meeting Report from the Second "Minimum Information for Biological and Biomedical Investigations" (MIBBI) workshop. PMID:21304730
Bioactive food components and cancer-specific metabonomic profiles. PMID:21113295
Challenges of molecular nutrition research 6: the nutritional phenotype database to store, share and evaluate nutritional systems biology studies. PMID:21052526
Recent advances in plant metabolomics and greener pastures. PMID:20948782
So what have data standards ever done for us? The view from metabolomics. PMID:20587079
Metabolomics and atherosclerosis. PMID:20464531
MSEA: a web-based tool to identify biologically meaningful patterns in quantitative metabolomic data. PMID:20457745
Opening up the "Black Box": metabolic phenotyping and metabolome-wide association studies in epidemiology. PMID:20056386
TrichOME: a comparative omics database for plant trichomes. PMID:19939948
Database resources in metabolomics: an overview. PMID:19418229
Survey-based naming conventions for use in OBO Foundry ontology development. PMID:19397794
The challenges for molecular nutrition research 2: quantification of the nutritional phenotype. PMID:18850187
Facilitating the development of controlled vocabularies for metabolomics technologies with text mining. PMID:18460187 - http://identifiers.org/pubmed/PMID: 29035042?resource=MIR:00100023
Tags:
Tags
More detailed information about this field from each metasource.
assay
metasource: Fairsharing.org
version: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
chemical screen
metasource: Fairsharing.org
version: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
chemical structure
metasource: Fairsharing.org
version: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
metabolite
metasource: Fairsharing.org
version: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
molecular structure
metasource: Fairsharing.org
version: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
nuclear magnetic resonance (nmr) spectroscopy
metasource: Fairsharing.org
version: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
Tags
More detailed information about this field from each metasource.
assay
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
chemical screen
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
chemical structure
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
metabolite
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
molecular structure
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
nuclear magnetic resonance (nmr) spectroscopy
metasource: Fairsharing.orgversion: FAIRsharing.org: nmrCV; Nuclear Magnetic Resonance Controlled Vocabulary; DOI: https://doi.org/10.25504/FAIRsharing.xm7tkj; Last edited: Jan. 8, 2019, 1:39 p.m.; Last accessed: Jan 03 2022 7:14 p.m.
assay chemical screen chemical structure metabolite molecular structure nuclear magnetic resonance (nmr) spectroscopy
Need help integrating and/or managing biomedical data?