CaSNP

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CaSNP

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:03.306446

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casnp

metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:03.306446

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Other names: casnp

Cancer SNP data on copy number alterations

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CaSNP: a database for interrogating copy number alterations of cancer genome from SNP array data
PMID: 20972221

metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:03.306446

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http://nar.oxfordjournals.org/content/39/suppl_1/D968

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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• CaSNP: a database for interrogating copy number alterations of cancer genome from SNP array data PubMed citations: 14.

  14 articles citing: CaSNP: a database for interrogating copy number alterations of cancer genome from SNP array data

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  Systems Biology and Experimental Model Systems of Cancer. PMID:33086677

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  Losses of cytokines and chemokines are common genetic features of human cancers: the somatic copy number alterations are correlated with patient prognoses and therapeutic resistance. PMID:30228934

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  Pan-cancer analysis of homozygous deletions in primary tumours uncovers rare tumour suppressors. PMID:29089486

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  Acquired CYP19A1 amplification is an early specific mechanism of aromatase inhibitor resistance in ERα metastatic breast cancer. PMID:28112739

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  Discretization of Gene Expression Data Unmasks Molecular Subgroups Recurring in Different Human Cancer Types. PMID:27537329

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  Oncogenomic portals for the visualization and analysis of genome-wide cancer data. PMID:26484415

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  arrayMap 2014: an updated cancer genome resource. PMID:25428357

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  Human cancer databases (review). PMID:25369839

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  Progenetix: 12 years of oncogenomic data curation. PMID:24225322

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  MATCHCLIP: locate precise breakpoints for copy number variation using CIGAR string by matching soft clipped reads. PMID:23967014

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  canEvolve: a web portal for integrative oncogenomics. PMID:23418540

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  Identifying putative breast cancer-associated long intergenic non-coding RNA loci by high density SNP array analysis. PMID:23267367

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  Functional genomic analysis of chromosomal aberrations in a compendium of 8000 cancer genomes. PMID:23132910

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  arrayMap: a reference resource for genomic copy number imbalances in human malignancies. PMID:22629346
• http://nar.oxfordjournals.org/content/39/suppl_1/D968

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human genes and diseases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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cancer gene databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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dna polymorphism

metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:03.306446

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oncology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:03.306446

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experimental design and studies

metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:03.306446

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genetic variation

metasource: bio.tools
version: extracted_at: 2022-11-04T11:36:03.306446

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human genes and diseases cancer-related genes dna polymorphism oncology experimental design and studies genetic variation