Article Minimum Information Standard
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Article Minimum Information Standard
metasource: Fairsharing.org
version: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
AMIS
metasource: Fairsharing.org
version: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
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Article Minimum Information Standard
metasource: Fairsharing.orgversion: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
AMIS
metasource: Fairsharing.orgversion: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Names
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Article Minimum Information Standard
metasource: Fairsharing.orgversion: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
AMIS
metasource: Fairsharing.orgversion: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
To help authors ensure in the future that necessary information is present in their article, the Article Minimum Information Standard (AMIS) guidelines have been defined. The guideline describes the mandatory (and useful) information that should be mentioned in literature articles to facilitate the curation process. These guidelines extend the minimal information defined by the MISFISHIE format (Deutsch at al. 2008, Nature Biotechnology).
Description
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To help authors ensure in the future that necessary information is present in their article, the Article Minimum Information Standard (AMIS) guidelines have been defined. The guideline describes the mandatory (and useful) information that should be mentioned in literature articles to facilitate the curation process. These guidelines extend the minimal information defined by the MISFISHIE format (Deutsch at al. 2008, Nature Biotechnology).
metasource: Fairsharing.orgversion: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Webpage:
https://www.aniseed.cnrs.fr/aniseed/default/submit_data#tab-4Webpage
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https://www.aniseed.cnrs.fr/aniseed/default/submit_data#tab-4
metasource: Fairsharing.orgversion: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Licence:
Name: GNU General Public License (GPL) 3.0Licence name
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GNU General Public License (GPL) 3.0
metasource: Fairsharing.orgversion: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Licence URL
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https://www.gnu.org/licenses/gpl.html
metasource: Fairsharing.orgversion: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications:
Publications
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The ANISEED database: digital representation, formalization, and elucidation of a chordate developmental program
PMID: 20647237
metasource: Fairsharing.org
version: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications
More detailed information about this field from each metasource.
The ANISEED database: digital representation, formalization, and elucidation of a chordate developmental program
PMID: 20647237
metasource: Fairsharing.org
version: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
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The ANISEED database: digital representation, formalization, and elucidation of a chordate developmental program
PubMed citations: 51.
51 articles citing: The ANISEED database: digital representation, formalization, and elucidation of a chordate developmental program
Spatiotemporal dynamics of single cell stiffness in the early developing ascidian chordate embryo. PMID:33727646
Phylogenetic comparison of egg transparency in ascidians by hyperspectral imaging. PMID:33257720
Phylogenetic Analyses of Glycosyl Hydrolase Family 6 Genes in Tunicates: Possible Horizontal Transfer. PMID:32823766
ANISEED 2019: 4D exploration of genetic data for an extended range of tunicates. PMID:31680137
From spiral cleavage to bilateral symmetry: the developmental cell lineage of the annelid brain. PMID:31640768
Differential Expression of a Classic Cadherin Directs Tissue-Level Contractile Asymmetry during Neural Tube Closure. PMID:31639367
Dynamic interplay of cell fate, polarity and force generation in ascidian embryos. PMID:30007244
ANISEED 2017: extending the integrated ascidian database to the exploration and evolutionary comparison of genome-scale datasets. PMID:29149270
Functional and evolutionary insights from the Ciona notochord transcriptome. PMID:28928284
Proteomic responses to elevated ocean temperature in ovaries of the ascidian Ciona intestinalis. PMID:28500033
Generic Theoretical Models to Predict Division Patterns of Cleaving Embryos. PMID:27997824
Embryo Microinjection and Electroporation in the Chordate Ciona intestinalis. PMID:27805579
CardioTF, a database of deconstructing transcriptional circuits in the heart system. PMID:27635320
Quantifying Mosaic Development: Towards an Evo-Devo Postmodern Synthesis of the Evolution of Development via Differentiation Trees of Embryos. PMID:27548240
The Simple Chordate Ciona intestinalis Has a Reduced Complement of Genes Associated with Fanconi Anemia. PMID:27279728
Representation of anatomy in online atlases and databases: a survey and collection of patterns for interface design. PMID:27206491
TCF/Lef regulates the Gsx ParaHox gene in central nervous system development in chordates. PMID:26940763
A Boolean Function for Neural Induction Reveals a Critical Role of Direct Intercellular Interactions in Patterning the Ectoderm of the Ascidian Embryo. PMID:26714026
ACAM, a novel member of the neural IgCAM family, mediates anterior neural tube closure in a primitive chordate. PMID:26542009
ANISEED 2015: a digital framework for the comparative developmental biology of ascidians. PMID:26420834
Correlations Between the Morphology of Sonic Hedgehog Expression Domains and Embryonic Craniofacial Shape. PMID:26321772
Evolution of the chordate regeneration blastema: Differential gene expression and conserved role of notch signaling during siphon regeneration in the ascidian Ciona. PMID:26206613
A pipeline for the systematic identification of non-redundant full-ORF cDNAs for polymorphic and evolutionary divergent genomes: Application to the ascidian Ciona intestinalis. PMID:26025923
An organismal perspective on C. intestinalis development, origins and diversification. PMID:25807088
Bioadhesion in ascidians: a developmental and functional genomics perspective. PMID:25657840
Quantitative and in toto imaging in ascidians: working toward an image-centric systems biology of chordate morphogenesis. PMID:25262824
Divergent mechanisms regulate conserved cardiopharyngeal development and gene expression in distantly related ascidians. PMID:25209999
Fibroblast growth factor signalling controls nervous system patterning and pigment cell formation in Ciona intestinalis. PMID:25189217
An otx/nodal regulatory signature for posterior neural development in ascidians. PMID:25121599
Ephrin-mediated restriction of ERK1/2 activity delimits the number of pigment cells in the Ciona CNS. PMID:25062608
Islet is a key determinant of ascidian palp morphogenesis. PMID:24993943
Ontology for the asexual development and anatomy of the colonial chordate Botryllus schlosseri. PMID:24789338
Dissection of a Ciona regulatory element reveals complexity of cross-species enhancer activity. PMID:24680932
Towards 3D in silico modeling of the sea urchin embryonic development. PMID:24386014
Spatial expression of transcription factors in Drosophila embryonic organ development. PMID:24359758
NK4 antagonizes Tbx1/10 to promote cardiac versus pharyngeal muscle fate in the ascidian second heart field. PMID:24311985
Anterior-posterior regionalized gene expression in the Ciona notochord. PMID:24288133
Parallel evolution of chordate cis-regulatory code for development. PMID:24282393
Manteia, a predictive data mining system for vertebrate genes and its applications to human genetic diseases. PMID:24038354
Study of Cis-regulatory Elements in the Ascidian Ciona intestinalis. PMID:23997651
Endrov: an integrated platform for image analysis. PMID:23722203
Tbx2/3 is an essential mediator within the Brachyury gene network during Ciona notochord development. PMID:23674602
Progenitors of the protochordate ocellus as an evolutionary origin of the neural crest. PMID:23575111
Highly conserved elements discovered in vertebrates are present in non-syntenic loci of tunicates, act as enhancers and can be transcribed during development. PMID:23393190
Identification of a rudimentary neural crest in a non-vertebrate chordate. PMID:23135395
Genetic and genomic toolbox of the chordate Ciona intestinalis. PMID:22964837
Monoaminergic modulation of photoreception in ascidian: evidence for a proto-hypothalamo-retinal territory. PMID:22642675
FGF signaling establishes the anterior border of the Ciona neural tube. PMID:22627287
The identification of transcription factors expressed in the notochord of Ciona intestinalis adds new potential players to the brachyury gene regulatory network. PMID:21594950
Expression of the Distalless-B gene in Ciona is regulated by a pan-ectodermal enhancer module. PMID:21338600
The importance of being specified: cell fate decisions and their role in cell biology. PMID:21079016
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journal article
metasource: Fairsharing.org
version: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Tags
More detailed information about this field from each metasource.
journal article
metasource: Fairsharing.orgversion: FAIRsharing.org: AMIS; Article Minimum Information Standard; DOI: https://doi.org/10.25504/FAIRsharing.8h2a6z; Last edited: March 12, 2021, 3:48 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
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