ATLASx is a computational map for the exploration of biochemical space ATLASx databases explore potential biochemical reactions within different chemical scopes: bioDB, bioATLAS, and chemATLAS.
molecular interactions, pathways and networks endocrinology and metabolism cheminformatics small molecule chemistry
NICEdrug.ch is a resource allowing systematic and large-scale computational analysis of drug biochemistry (metabolic precursors or prodrugs and metabolic fate or degradation), enzymatic targets, and t ...
SABIO-RK is a database for biochemical reactions, their kinetic equations with their parameters, and the experimental conditions under which these parameters were measured.
Multimorbidity is database of genetically interpretable comorbidities among common diseases in UK Biobank.
A biocultural database combining biological pathways and historical linguistic data of Chinese Materia Medica for drug development.
MitopatHs is a database that allows to navigate among the biochemical pathways (PatHs) of human (H) mitochondria (Mito). It is a logically-framed tool for visualizing multiple mitochondrial pathways.
Thermodynamics calculator for biochemical reactions. eQuilibrator is a simple web interface designed to enable easy thermodynamic analysis of biochemical systems. eQuilibrator enables free-text search ...
Human 51 672 molecular pathways database with tools for activity calculating and visualization.
Virtual Metabolic Human (VMH) database captures information on human and gut microbial metabolism and links this information to hundreds of diseases and nutritional data.
MetAMDB is a software/database for the analysis of metabolic models and specifically the work with atom mappings.
Rhea is a comprehensive and non-redundant resource of expert-curated chemical and transport reactions of biological interest. Rhea can be used for enzyme annotation, genome-scale metabolic modeling an ...
An NSF-funded multi-institutional project developing metabolomics as a functional genomics tool for elucidating the functions of Arabidopsis genes.
Hierarchy and modularity in evolving metabolic networks. Enzyme recruitment is a fundamental evolutionary driver of modern metabolism. We see evidence of recruitment at work in the metabolic Molecula ...
The BioCyc collection of Pathway/Genome Databases (PGDBs) provides electronic reference sources on the pathways and genomes of hundreds of organisms with completely sequenced genomes. Each database co ...
Comprehensive analysis of metabolic pathways using transcript abundance data from next-generation sequencing in green algae.
A renovated knowledgebase for deriving biological and chemical insight from genes, proteins, and metabolites.