Other names: amypdb
An online database dedicated to amyloid precursor families and to their amino acid sequence signatures.
protein properties
BACTIBASE contains calculated or predicted physicochemical properties of bacteriocins produced by both Gram-positive and Gram-negative bacteria. The information in this database is very easy to extrac ...
Amino Acid Ontology is an ontology of amino acids and their properties. It captures how biochemists talk about amino acids; that is, it is a conceptualisation of amino acids. This ontology smoothens o ...
Database of amino acid distances in proteins and web application for statistical review of distances. Three-dimensional structure of a protein chain is determined by its amino acid interactions. One ...
The PGDBj Ortholog Database, created under the auspices of the Plant Genome Database Japan (PGDBj), contains information about orthologous genes in plants based on their corresponding amino acid seque ...
miRNA target prediction and functional annotation
AAindex is a database of amino acid indices and amino acid mutation matrices. An amino acid index is a set of 20 numerical values representing various physicochemical and biochemical properties of ami ...
Sequences and motifs of the phycobilin lyase protein family
InterPro is a resource that provides functional analysis of protein sequences by classifying them into families and predicting the presence of domains and important sites. To classify proteins in this ...
BIPAA is a central platform to assist genomics and post-genomics programs developed on insects associated to agroecosystem, for the Plant Health and Environment Division of INRA. We provide online acc ...
Structural motifs in protein families and superfamilies
DescribePROT is a database containing annotations of 13 putative structural and functional properties at the amino acid level for ~1.4 million proteins from 83 popular/model organism, to be extended t ...
WALTZ-DB 2.0 is a database for characterizing short peptides for their amyloid fiber-forming capacities. The majority of the data comes from electron microscopy, FTIR and Thioflavin-T experiments done ...
PANDIT is a collection of multiple sequence alignments and phylogenetic trees covering many common protein domains. It contains the seed protein sequence alignments from the Pfam-A (curated families) ...
An online database for skeletal injuries of known ages.
An online database towards comprehensive essential gene annotation for prokaryotes.
ProRepeat is an integrated curated repository and analysis platform for in-depth research on the biological characteristics of amino acid tandem repeats. ProRepeat collects repeats from all proteins i ...
A database dedicated to the tyrosine kinase recepter.
The Online Protein Processing Resource
Proteome-pI is an online database containing information about predicted isoelectric points for 5,029 proteomes (21 million of sequences) calculated using 18 methods. The isoelectric point, the pH at ...
PROSITE is a database of protein families and domains. PROSITE consists of documentation entries describing protein domains, families and functional sites as well as associated patterns and profiles t ...