TOPPR

eProS

Energy profiles of protein structures

Tabloid Proteome

an annotated database of protein associations. Tabloid Proteome is a database of protein association network generated using publically available mass spectrometry based experiments in PRIDE.These as ...

MALISAM

Manual alignments for structurally analogous motifs in proteins

PPT-DB

Protein Property Prediction and Testing Database

InterDom

Putative protein domain interactions

iPfam

A database of Pfam domain interactions

Protein Clusters

Related protein sequences (clusters)of Reference Sequence proteins encoded by complete genomes

LenVarDB

Database of length variantion in protein domains

MP:PD

Membrane Proteins: Packing Densities, packing defects and internal water molecules

The Protein Database

The Entrez Protein search and retrieval system contains protein entries that have been compiled from a variety of sources, including SwissProt, PIR, PRF, PDB, and translations from annotated coding re ...

PIDD

PIDD is a dedicated database and structural bio-informatics system for distance based protein modeling. The database is developed to host and analyze the statistical data for protein inter-atomic dist ...

SuperSite

Dictionary of binding sites in proteins

OPTIC

Orthologous and Paralogous Transcripts in Clades

ProTeus

Signature sequences at the protein N- and C-termini

ValidNESs

Secreted Protein Database

Secreted proteins from human, mouse and rat

dbPTM

dbPTM is a databases which accumulates the biological information related to protein post-translational modification (PTM), such as the catalytic sites, structural information, solvent accessibility o ...

CoPS

Comprehensive peptide signature database

PRF

Protein research foundation database of peptides: sequences, literature and unnatural amino acids