phylogenize

Phylogenize is a web tool that allows users to link microbial genes to environments, accounting for phylogeny. More specifically, given community composition data, phylogenize links genes in microbial genomes to either microbial prevalence in, or specificity for, a given environment, while also taking into account an important potential confounder: the phylogenetic relationships between microbes.

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phylogenize: correcting for phylogeny reveals genes associated with microbial distributions
PMID: 31588499

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:11.249907

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• phylogenize: correcting for phylogeny reveals genes associated with microbial distributions PubMed citations: 0.

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microbial ecology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:11.249907

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phylogeny

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:11.249907

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genotype and phenotype

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:11.249907

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metagenomics

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:11.249907

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molecular interactions, pathways and networks

metasource: bio.tools
version: extracted_at: 2022-11-04T11:29:11.249907

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microbial ecology phylogeny genotype and phenotype metagenomics molecular interactions, pathways and networks