The Small Subunit rRNA Modification Database

Description

More detailed information about this field from each metasource.

Modified nucleosides in small subunit rRNA

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

RNA Modification Database

Naturally modified nucleosides in RNA

3D rRNA modification maps

Locations of modified rRNA nucleotides within the 3D structure of the ribosome

European rRNA database

All complete or nearly complete rRNA sequences

Ribosomal Database Project (RDP-II)

The Ribosomal Database Project - II (RDP-II)(1) provides data, tools and services related to ribosomal RNA sequences to the research community. Through its website (http://rdp.cme.msu.edu), RDP-II off ...

The RNA Modification Database (RNAMDB)

The RNA Modification Database contains information pertaining to naturally occurring RNA modifications. The database employs an easy-to-use, searchable interface for obtaining detailed data on the 109 ...

Greengenes

A 16S rRNA gene database which provides chimera screening, standard alignment, and taxonomic classification using multiple published taxonomies.

SILVA

SILVA is a comprehensive, quality-controlled web resource for up-to-date aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains alongside supplementary online ser ...

16S and 23S Ribosomal RNA Mutation Database

Access to the expanded versions of the 16S and 23S Ribosomal RNA Mutation Databases has been improved to permit searches of the lists of alterations for all the data from (1) one specific organism, (2 ...

DNA Modification Database

DNAmod is an open-source database (https://dnamod.hoffmanlab.org) that catalogues DNA modifications and provides a single source to learn about their properties. The database annotates the chemical pr ...

MODOMICS

MODOMICS is the first comprehensive database system for biology of RNA modification. It integrates information about the chemical structure of modified nucleosides, their localization in RNA sequences ...

Yeast snoRNA Database

Yeast small nucleolar RNAs

probeBase

probeBase is a manually maintained and curated database of rRNA-targeted oligonucleotide probes and primers. Contextual information and multiple options for evaluating in silico hybridization performa ...

HHMD

Human Histone Modification Database

Cereal Small RNA Database

Small RNAs (smRNAs), which include microRNAs (miRNAs), small-interfering RNAS (siRNAs) and trans-acting siRNAs (ta-siRNAs) are ~19-24 nt RNAs that are important negative regulators of nucleotide seque ...

5S Ribosomal RNA Database

5S ribosomal RNA is an integral component of the large subunit of all cytoplasmic and most organellar ribosomes. Its small size and association with ribosomal as well as non-ribosomal proteins made it ...

snOPY

Small nucleolar RNA orthological gene database.

Ligand Expo

Ligand Expo is a data resource for finding information about small molecules bound to proteins and nucleic acids. Tools are provided to search the PDB dictionary for chemical components, to identify s ...

SmedGD

The Schmidtea mediterranea genome database

CellPhoneDB

CellPhoneDB is a publicly available repository of curated receptors, ligands and their interactions. Subunit architecture is included for both ligands and receptors, representing heteromeric complexes ...

sRNAMap

small regulatory RNA in microbial genomes

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The Small Subunit rRNA Modification Database

Webpage:

Tags:

Tags
More detailed information about this field from each metasource.

rna sequence databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

More to explore:

1/20

RNA Modification Database

3D rRNA modification maps

European rRNA database

Ribosomal Database Project (RDP-II)

The RNA Modification Database (RNAMDB)

Greengenes

SILVA

16S and 23S Ribosomal RNA Mutation Database

DNA Modification Database

MODOMICS

Yeast snoRNA Database

probeBase

HHMD

Cereal Small RNA Database

5S Ribosomal RNA Database

snOPY

Ligand Expo

SmedGD

CellPhoneDB

sRNAMap

The Small Subunit rRNA Modification Database

Webpage:

Tags: Tags More detailed information about this field from each metasource. × rna sequence databases metasource: Nucleic Acid Research database catalogue version: extracted_at: 2022-11-04T11:16:25.468657 Close

More to explore:

1/20

RNA Modification Database

3D rRNA modification maps

European rRNA database

Ribosomal Database Project (RDP-II)

The RNA Modification Database (RNAMDB)

Greengenes

SILVA

16S and 23S Ribosomal RNA Mutation Database

DNA Modification Database

MODOMICS

Yeast snoRNA Database

probeBase

HHMD

Cereal Small RNA Database

5S Ribosomal RNA Database

snOPY

Ligand Expo

SmedGD

CellPhoneDB

sRNAMap

Tags:

Tags
More detailed information about this field from each metasource.

rna sequence databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657