3D rRNA modification maps

Description

More detailed information about this field from each metasource.

Locations of modified rRNA nucleotides within the 3D structure of the ribosome

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Yeast snoRNA Database

Yeast small nucleolar RNAs

The Small Subunit rRNA Modification Database

Modified nucleosides in small subunit rRNA

European rRNA database

All complete or nearly complete rRNA sequences

RNA Modification Database

Naturally modified nucleosides in RNA

IEDB-3D

Structural data within the Immune Epitope Database

16S and 23S Ribosomal RNA Mutation Database

Access to the expanded versions of the 16S and 23S Ribosomal RNA Mutation Databases has been improved to permit searches of the lists of alterations for all the data from (1) one specific organism, (2 ...

MODOMICS

MODOMICS is the first comprehensive database system for biology of RNA modification. It integrates information about the chemical structure of modified nucleosides, their localization in RNA sequences ...

RNA FRABASE

A database of 3D RNA fragments within known RNA structures

PDBSite

3D structure of protein functional sites

Ribosomal Database Project (RDP-II)

The Ribosomal Database Project - II (RDP-II)(1) provides data, tools and services related to ribosomal RNA sequences to the research community. Through its website (http://rdp.cme.msu.edu), RDP-II off ...

probeBase

probeBase is a manually maintained and curated database of rRNA-targeted oligonucleotide probes and primers. Contextual information and multiple options for evaluating in silico hybridization performa ...

Greengenes

A 16S rRNA gene database which provides chimera screening, standard alignment, and taxonomic classification using multiple published taxonomies.

SILVA

SILVA is a comprehensive, quality-controlled web resource for up-to-date aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains alongside supplementary online ser ...

Protein MODification

PSI-MOD is an ontology consisting of terms that describe protein chemical modifications, logically linked by an is_a relationship in such a way as to form a direct acyclic graph (DAG). The PSI-MOD ont ...

NIH 3D Print Exchange

Few scientific 3D-printable models are available online, and the expertise required to generate and validate such models remains a barrier. The NIH 3D Print Exchange eliminates this gap with an open, ...

3D-Interologs

Protein-protein interactions in various evolutionary lineages

3DIV

Three-dimensional (3D) chromatin structure is an emerging paradigm for understanding gene regulation mechanisms. Hi-C (high-throughput chromatin conformation capture), a method to detect long-range ch ...

RPFdb

Ribosome profiling database

3D interacting domains

The database of 3D Interaction Domains (3did) is a collection of domain-domain interactions in proteins for which high-resolution three-dimensional structures are known. 3did exploits structural infor ...

ViBrism DB

ViBrism DB is a database for anatomical gene expression maps and topological co-expression network graphs created with original techniques of microtomy-based gene expression measurements, Transcriptom ...

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3D rRNA modification maps

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More detailed information about this field from each metasource.

rna sequence databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

More to explore:

1/20

Yeast snoRNA Database

The Small Subunit rRNA Modification Database

European rRNA database

RNA Modification Database

IEDB-3D

16S and 23S Ribosomal RNA Mutation Database

MODOMICS

RNA FRABASE

PDBSite

Ribosomal Database Project (RDP-II)

probeBase

Greengenes

SILVA

Protein MODification

NIH 3D Print Exchange

3D-Interologs

3DIV

RPFdb

3D interacting domains

ViBrism DB

3D rRNA modification maps

Webpage:

Tags: Tags More detailed information about this field from each metasource. × rna sequence databases metasource: Nucleic Acid Research database catalogue version: extracted_at: 2022-11-04T11:16:25.468657 Close

More to explore:

1/20

Yeast snoRNA Database

The Small Subunit rRNA Modification Database

European rRNA database

RNA Modification Database

IEDB-3D

16S and 23S Ribosomal RNA Mutation Database

MODOMICS

RNA FRABASE

PDBSite

Ribosomal Database Project (RDP-II)

probeBase

Greengenes

SILVA

Protein MODification

NIH 3D Print Exchange

3D-Interologs

3DIV

RPFdb

3D interacting domains

ViBrism DB

Tags:

Tags
More detailed information about this field from each metasource.

rna sequence databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657