Short Read Archive eXtensible Markup Language
Names
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Short Read Archive eXtensible Markup Language
metasource: Fairsharing.org
version: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
SRA-XML
metasource: Fairsharing.org
version: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Names
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Short Read Archive eXtensible Markup Language
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
SRA-XML
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Names
More detailed information about this field from each metasource.
Short Read Archive eXtensible Markup Language
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
SRA-XML
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
The SRA data model contains the following objects: Study: information about the sequencing project Sample: information about the sequenced samples Experiment: information about the libraries, platform; associated with study, sample(s) and run(s) Run: contains the raw data files Analysis: contains the analysis data files; associated with study, sample and run objects Submission: information about the submission actions include release date. It is used by The Sequence Read Archive (SRA) and the European Nucleotide Archive (ENA) to store raw sequencing data from the next generation of sequencing platforms including Roche 454 GS System, Illumina Genome Analyzer, Applied Biosystems SOLiD System, Helicos Heliscope, Complete Genomics, and Pacific Biosciences SMRT. Please note that the SRA-XML webpage states that "This page has been deprecated and may be removed without further notice."
Description
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The SRA data model contains the following objects: Study: information about the sequencing project Sample: information about the sequenced samples Experiment: information about the libraries, platform; associated with study, sample(s) and run(s) Run: contains the raw data files Analysis: contains the analysis data files; associated with study, sample and run objects Submission: information about the submission actions include release date. It is used by The Sequence Read Archive (SRA) and the European Nucleotide Archive (ENA) to store raw sequencing data from the next generation of sequencing platforms including Roche 454 GS System, Illumina Genome Analyzer, Applied Biosystems SOLiD System, Helicos Heliscope, Complete Genomics, and Pacific Biosciences SMRT. Please note that the SRA-XML webpage states that "This page has been deprecated and may be removed without further notice."
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Webpage:
https://www.ebi.ac.uk/ena/submit/read-xml-format-1-5Webpage
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https://www.ebi.ac.uk/ena/submit/read-xml-format-1-5
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Licence:
Name: EMBL-EBI Terms of UseLicence name
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EMBL-EBI Terms of Use
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Licence URL
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http://www.ebi.ac.uk/about/terms-of-use
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Tags:
Tags
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assay
metasource: Fairsharing.org
version: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
dna sequence data
metasource: Fairsharing.org
version: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
nucleic acid sequence
metasource: Fairsharing.org
version: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
region
metasource: Fairsharing.org
version: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Tags
More detailed information about this field from each metasource.
assay
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
dna sequence data
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
nucleic acid sequence
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
region
metasource: Fairsharing.orgversion: FAIRsharing.org: SRA-XML; Short Read Archive eXtensible Markup Language; DOI: https://doi.org/10.25504/FAIRsharing.q72e3w; Last edited: Feb. 11, 2020, 9:01 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
assay dna sequences nucleic acid sequence region
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