RNA-binding proteins across species
EuRBPDB is a comprehensive and user-friendly database for classifying and annotating eukaryotic RNA binding proteins (RBPs) drawn from various public databases. Over 100 eukaryotic species such as hum ...
Post-transcriptional regulation by RNA-binding proteins
Experimentally-determined binding sites of RNA-binding proteins
RBP-Var is a database of functional variants involved in regulation mediated by RNA-binding proteins. Human genome variants can change the RNA structure and affect RNA-protein interactions.
RNA-binding proteins and their specificities
Comprehensive database of Escherichia coli RNA-binding proteins (RBPs). This database documents RBPs identified by genome-wide survey of all known complete E. coli proteomes. EcRBPome also presents a ...
Database to integrate epitranscriptome sequencing data for exploring post-transcriptionally modifications of RNAs, as well as their relationships with microRNA binding events, disease-related SNPs and ...
DRscDB is a single-cell RNA-seq resource for data mining and data comparison across species.
NucMap is a database of genome-wide nucleosome positioning across multiple species. Based on raw sequence data from published studies, NucMap integrates, analyzes, and visualizes nucleosome positionin ...
a database of carbohydrate-binding proteins. An open access database ready to answer your sweetest queries. Carbohydrate-binding proteins play crucial roles across all viruses and organisms
Database of RNA interactions in post-transcriptional regulation.
A comprehensive knowledge of all the factors involved in splicing, both proteins and RNAs, and of their interaction network is crucial for reaching a better understanding of this process and its funct ...
LIFEdb is a database on the localisation, interaction, functional assays and expression of human proteins. It integrates data from large-scale functional genomics assays and manual cDNA annotation wit ...
The RNA G-quadruplex and RG4-binding proteins database.
OlfactionBase is a manually-curated comprehensive database that incorporates multidimensional facets of major components involved in the olfaction process, i.e., odors, chemicals (both odorants and od ...
RNA-binding sites database
circVAR database is genome-wide archive of genetic variants for human circular RNAs Circular RNAs (circRNAs), the 3' and 5' ends of which are covalently linked, are a kind of widely distributed and ab ...
IsoRank PPI Network Alignment Based Ortholog Database
circ2GO is a comprehensive database compiling and analyzing circular RNAs found in lung cancer cell lines providing the data in tables as well as visualizing it in transcript maps and in heatmaps. Imp ...
POGs/PlantRBP (http://plantrbp.uoregon.edu/) is a relational database that integrates data from rice, Arabidopsis, and maize by placing the complete Arabidopsis and rice proteomes and available maize ...