Protein-ligand interaction ontology
Names
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Protein-ligand interaction ontology
metasource: Fairsharing.org
version: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/PLIO
PLIO
metasource: Fairsharing.org
version: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/PLIO
Names
More detailed information about this field from each metasource.
Protein-ligand interaction ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/PLIO
PLIO
metasource: Fairsharing.orgversion: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/PLIO
Names
More detailed information about this field from each metasource.
Protein-ligand interaction ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/PLIO
PLIO
metasource: Fairsharing.orgversion: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/PLIO
The protein--ligand interaction ontology (PLIO) was developed around three main concepts, namely target, ligand and interaction, and was enriched by adding synonyms, useful annotations and references. PLIO represents knowledge about the interaction of proteins and ligands (including drugs) and has a different scope and conceptual resolution than, for example, the molecular interaction ontology. An important feature of PLIO is that it links directly from an ontology framework describing protein–ligand interactions to the mathematical formulas relevant for the computation of some of the entities represented in the ontology.
Description
More detailed information about this field from each metasource.
The protein--ligand interaction ontology (PLIO) was developed around three main concepts, namely target, ligand and interaction, and was enriched by adding synonyms, useful annotations and references. PLIO represents knowledge about the interaction of proteins and ligands (including drugs) and has a different scope and conceptual resolution than, for example, the molecular interaction ontology. An important feature of PLIO is that it links directly from an ontology framework describing protein–ligand interactions to the mathematical formulas relevant for the computation of some of the entities represented in the ontology.
metasource: Fairsharing.orgversion: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
The protein--ligand interaction ontology (PLIO) was developed around three main concepts, namely target, ligand and interaction, and was enriched by adding synonyms, useful annotations and references.
metasource: Biontology / Bioportalversion: 1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/PLIO
Webpage:
https://www.scai.fraunhofer.de/en/business-research-areas/bioinformatics/downloads.htmlWebpage
More detailed information about this field from each metasource.
https://www.scai.fraunhofer.de/en/business-research-areas/bioinformatics/downloads.html
metasource: Fairsharing.orgversion: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
PLIO: an ontology for formal description of protein-ligand interactions
PMID: 21546398
metasource: Fairsharing.org
version: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/PLIO
Publications
More detailed information about this field from each metasource.
PLIO: an ontology for formal description of protein-ligand interactions
PMID: 21546398
metasource: Fairsharing.org
version: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 1.0 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/PLIO
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PLIO: an ontology for formal description of protein-ligand interactions
PubMed citations: 6.
6 articles citing: PLIO: an ontology for formal description of protein-ligand interactions
Biomarker identification of hepatocellular carcinoma using a methodical literature mining strategy. PMID:31725857
CSEO - the Cigarette Smoke Exposure Ontology. PMID:25093069
Biomarker-guided translation of brain imaging into disease pathway models. PMID:24287435
HuPSON: the human physiology simulation ontology. PMID:24267822
Towards a bioinformatics of patterning: a computational approach to understanding regulative morphogenesis. PMID:23429669
Improving integrative searching of systems chemical biology data using semantic annotation. PMID:22401035
Tags:
Tags
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binding
metasource: Fairsharing.org
version: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
ligand
metasource: Fairsharing.org
version: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
ligand binding domain binding
metasource: Fairsharing.org
version: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
protein
metasource: Fairsharing.org
version: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
protein interaction
metasource: Fairsharing.org
version: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Tags
More detailed information about this field from each metasource.
binding
metasource: Fairsharing.orgversion: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
ligand
metasource: Fairsharing.orgversion: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
ligand binding domain binding
metasource: Fairsharing.orgversion: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
protein interaction
metasource: Fairsharing.orgversion: FAIRsharing.org: PLIO; Protein-ligand interaction ontology; DOI: https://doi.org/10.25504/FAIRsharing.6mmbzs; Last edited: Jan. 8, 2019, 1:35 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
binding ligand ligand binding domain binding protein protein interaction
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