A tag-based file format for storing and interchanging raster images.
OME-TIFF is a standardized file format for multidimensional image data. OME-TIFF was created to maximize the respective strengths of OME-XML and TIFF. It takes advantage of the metadata defined in OME ...
The PCL file format is a tab delimited file format that describes an expression dataset.
A CT (Connectivity Table) file contains secondary structure information for a RNA sequence.
ENA Sequence Flat File Format is a standardised plain text format for nucleotide sequences. This format was previously called the EMBL Sequence Flat File Format.
NimbleGen Design File Format is a standard data file format. NimbleGen is now a trademark of Roche.
The Citation File Format (CFF) is a human-centric, machine-readable format for software citation metadata. It is developed to provide an easy way for RSEs, and other developers of software in academia ...
The MHA file extension is related to MetaImage is a special medicine image format used in the Insight Segmentation and Registration Toolkit (ITK). MetaImage is a text-based tagged file format for medi ...
ICM binary file Format is used in databases pertaining to structural biology and protein families. This format can be used for the graphical representation of RNA, DNA, and proteins interactions.
Gene Prediction File Format (genePred) is a table format commonly used for gene prediction tracks in the Genome Browser. Variations of genePred include standard format, extended format and a format wh ...
NIX defines a data model for annotated scientific datasets, i.e. data together with metadata, and a corresponding file format based on HDF5 for storing and sharing such datasets. In particular, this f ...
FASTQ is a text-based file format for sharing sequencing data combining both the sequence and an associated per base quality score.
Ontology-based annotation data can be submitted to the Gene Ontology Consortium and other projects (e.g. the Planteome project) in the Gene Association Format 2.1 (GAF 2.1). The annotation flat file f ...
The Neuroimaging Informatics Technology Initiative (nifti) file format was envisioned about a decade ago as a replacement to the then widespread, yet problematic, analyze 7.5 file format. The main pro ...
Ontology-based annotation data can be submitted to the Gene Ontology Consortium and other projects (e.g. the Planteome project) in the Gene Association Format 2.2 (GAF 2.2). The annotation flat file f ...
Analyze 7.5 can store voxel-based volumes and consists of two files: One file with the actual data in a binary format with the filename extension .img and another file (header with filename extension ...
Cooler is a file format that implements genomically-labeled sparse 2D arrays (matrices) with identical axes in HDF5. It is also the name of the Python package that supports the format. Cooler was desi ...
HDF5 is a data model, library, and file format for storing and managing data. It supports an unlimited variety of datatypes, and is designed for flexible and efficient I/O and for high volume and comp ...
The profile hidden Markov Model (HMM) calculated from multiple sequence alignment data in this service is stored in Profile HMM save format (usually with ".hmm" extension). It is an ASCII file contain ...
The CXI file format was created as common format for all the data in the Coherent X-ray Imaging Data Bank (CXIDB). Naturally its scope is all experimental data collected during Coherent X-ray Imaging e ...
A Research Information Systems (RIS) file is a plain text file that can contain multiple references. RIS files can be exported from reference software such as EndNote and Reference Manager. Each refer ...