miRNEST is an integrative collection of animal, plant and virus microRNA data. miRNEST is being gradually developed to create an integrative resource of miRNA-associated data. The data comes from our ...
SyntDB: defining orthologues of human long noncoding RNAs across primates. SyntDB - the database of human long non-coding RNAs conserved across primates. Comprehensive collection of long noncoding RN ...
mirEX2 is a comprehensive platform for comparative analysis of primary microRNA expression data. RT–qPCR-based gene expression profiles are stored in a universal and expandable database scheme and wra ...
Biomolecule Stretching Database
KnotProt collects information about proteins with knots or slipknots. The knotting complexity of proteins is presented in the form of a matrix diagram that shows users the knot type of the entire poly ...
AlphaKnot is a server that measures entanglement in AlphaFold-solved protein models while considering pLDDT confidence values.
A3D Database is a database for structure-based protein aggregation predictions for the human proteome
Noncoding RNA Expression Database
A database of RNA processing pathways
Families of protein-coding genes from five sequenced plant species
A database of genus characteristics of proteins and RNA. A database of genus characteristics. The Genus database collects information about topological structure and complexity of proteins and RNA c ...
RNA structural modules and their interactions
MoonDB is a database containing predicted Extreme Multifunctional (EMF) proteins (i.e. proteins with several unrelated functions), as well as a set of manually curated moonlighting proteins. Moonlight ...
LinkProt collects information about protein chains and complexes that form links. LinkProt detects deterministic links (with loops closed by cysteine), and determines likelihood of formation of links ...
Evolutionary-oriented database of RNA recognition motif sequences.
MODOMICS is the first comprehensive database system for biology of RNA modification. It integrates information about the chemical structure of modified nucleosides, their localization in RNA sequences ...
A database of 3D RNA fragments within known RNA structures
DNA repair pathways of human, yeast and E.coli
DNAzymes i.e. DNA molecules with catalytic activity
5S ribosomal RNA is an integral component of the large subunit of all cytoplasmic and most organellar ribosomes. Its small size and association with ribosomal as well as non-ribosomal proteins made it ...