Collaborative Computing Project for NMR
Names
More detailed information about this field from each metasource.
Collaborative Computing Project for NMR
metasource: Fairsharing.org
version: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
CCPN data model
metasource: Fairsharing.org
version: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Names
More detailed information about this field from each metasource.
Collaborative Computing Project for NMR
metasource: Fairsharing.orgversion: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
CCPN data model
metasource: Fairsharing.orgversion: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Names
More detailed information about this field from each metasource.
Collaborative Computing Project for NMR
metasource: Fairsharing.orgversion: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
CCPN data model
metasource: Fairsharing.orgversion: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
This source may no longer be available. No known URL could be resolved successfully.
The CCPN Data Model for macromolecular NMR is intended to cover all data needed for macromolecular NMR spectroscopy from the initial experimental data to the final validation. It serves for exchange of data between programs, for storage, data harvesting, and database deposition. The data model proper is an abstract description of the relevant data and their relationships - it is implemented in the modeling language UML. From this CCPN autogenerates interfaces (APIs) for various languages, format description and I/O routines, and documentation.
Description
More detailed information about this field from each metasource.
The CCPN Data Model for macromolecular NMR is intended to cover all data needed for macromolecular NMR spectroscopy from the initial experimental data to the final validation. It serves for exchange of data between programs, for storage, data harvesting, and database deposition. The data model proper is an abstract description of the relevant data and their relationships - it is implemented in the modeling language UML. From this CCPN autogenerates interfaces (APIs) for various languages, format description and I/O routines, and documentation.
metasource: Fairsharing.orgversion: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Webpage:
http://www.ccpn.ac.uk/software/extras/datamodelfolder/datamodelWebpage
More detailed information about this field from each metasource.
http://www.ccpn.ac.uk/software/extras/datamodelfolder/datamodel
metasource: Fairsharing.orgversion: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
A framework for scientific data modeling and automated software development
PMID: 15613391
metasource: Fairsharing.org
version: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Publications
More detailed information about this field from each metasource.
A framework for scientific data modeling and automated software development
PMID: 15613391
metasource: Fairsharing.org
version: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
-
A framework for scientific data modeling and automated software development
PubMed citations: 24.
24 articles citing: A framework for scientific data modeling and automated software development
Guiding the folding of G-quadruplexes through loop residue interactions. PMID:35758626
Expanding the Topological Landscape by a G-Column Flip of a Parallel G-Quadruplex. PMID:33955615
An integrative knowledge graph for rare diseases, derived from the Genetic and Rare Diseases Information Center (GARD). PMID:33183351
Smad7 Binds Differently to Individual and Tandem WW3 and WW4 Domains of WWP2 Ubiquitin Ligase Isoforms. PMID:31546607
Modeling Crop Genetic Resources Phenotyping Information Systems. PMID:31281323
Native structure-based modeling and simulation of biomolecular systems per mouse click. PMID:25176255
Solutions for medical databases optimal exploitation. PMID:24653769
Ligand-dependent dynamics of the active-site lid in bacterial dimethylarginine dimethylaminohydrolase. PMID:24484052
Insight into the HIV-1 Vif SOCS-box-ElonginBC interaction. PMID:24225024
ACPYPE - AnteChamber PYthon Parser interfacE. PMID:22824207
An automated system designed for large scale NMR data deposition and annotation: application to over 600 assigned chemical shift data entries to the BioMagResBank from the Riken Structural Genomics/Proteomics Initiative internal database. PMID:22689068
Staphylococcal biofilm-forming protein has a contiguous rod-like structure. PMID:22493247
The MOLGENIS toolkit: rapid prototyping of biosoftware at the push of a button. PMID:21210979
Straightforward and complete deposition of NMR data to the PDBe. PMID:20680401
PDBe: Protein Data Bank in Europe. PMID:19858099
The NMR restraints grid at BMRB for 5,266 protein and nucleic acid PDB entries. PMID:19809795
Benefits of structural genomics for drug discovery research. PMID:19594422
Observation of a low-temperature, dynamically driven structural transition in a polypeptide by solid-state NMR spectroscopy. PMID:19067520
A perspective for biomedical data integration: design of databases for flow cytometry. PMID:18275602
A global analysis of NMR distance constraints from the PDB. PMID:17922259
KUJIRA, a package of integrated modules for systematic and interactive analysis of NMR data directed to high-throughput NMR structure studies. PMID:17636449
Model-driven user interfaces for bioinformatics data resources: regenerating the wheel as an alternative to reinventing it. PMID:17169146
A nomenclature and data model to describe NMR experiments. PMID:17031528
E-MSD: improving data deposition and structure quality. PMID:16381867
Tags:
Tags
More detailed information about this field from each metasource.
molecular entity
metasource: Fairsharing.org
version: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
molecular structure
metasource: Fairsharing.org
version: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
nuclear magnetic resonance (nmr) spectroscopy
metasource: Fairsharing.org
version: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
Tags
More detailed information about this field from each metasource.
molecular entity
metasource: Fairsharing.orgversion: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
molecular structure
metasource: Fairsharing.orgversion: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
nuclear magnetic resonance (nmr) spectroscopy
metasource: Fairsharing.orgversion: FAIRsharing.org: CCPN data model; Collaborative Computing Project for NMR; DOI: https://doi.org/10.25504/FAIRsharing.avw5q; Last edited: Jan. 8, 2019, 1:37 p.m.; Last accessed: Jan 03 2022 7:12 p.m.
molecular entity molecular structure nuclear magnetic resonance (nmr) spectroscopy
Need help integrating and/or managing biomedical data?