Prepubertal nutritional modulation in the bull and its impact on sperm DNA methylation.
PMID:35779136
Whole-Genome Resequencing Deciphers New Insight Into Genetic Diversity and Signatures of Resistance in Cultivated Cotton Gossypium hirsutum.
PMID:35778659
Identification of hub genes and regulatory networks in histologically unstable carotid atherosclerotic plaque by bioinformatics analysis.
PMID:35773742
Transcriptome profiling of two super hybrid rice provides insights into the genetic basis of heterosis.
PMID:35773646
Mito-nuclear coevolution and phylogenetic artifacts: the case of bivalve mollusks.
PMID:35773462
De novo transcriptome assembly and comprehensive assessment provide insight into fruiting body formation of Sparassis latifolia.
PMID:35773379
Differentially methylated and expressed genes in familial type 1 diabetes.
PMID:35773317
N(6)-methyladenosine methylation-regulated polo-like kinase 1 cell cycle homeostasis as a potential target of radiotherapy in pancreatic adenocarcinoma.
PMID:35773310
Survival-related indicators ALOX12B and SPRR1A are associated with DNA damage repair and tumor microenvironment status in HPV 16-negative head and neck squamous cell carcinoma patients.
PMID:35768785
Transcriptome analysis of SerpinB2-deficient breast tumors provides insight into deciphering SerpinB2-mediated roles in breast cancer progression.
PMID:35768767
Identification of stress-related genes by co-expression network analysis based on the improved turbot genome.
PMID:35768602
Comparative transcriptome analysis of Indian domestic duck reveals candidate genes associated with egg production.
PMID:35768515
GREM1 is required to maintain cellular heterogeneity in pancreatic cancer.
PMID:35768509
Effects and associated transcriptomic landscape changes of methamphetamine on immune cells.
PMID:35765053
Differential proteomics of placentas reveals metabolic disturbance and oxidative damage participate yak spontaneous miscarriage during late pregnancy.
PMID:35761325
A comparative analysis of extracellular vesicles (EVs) from human and feline plasma.
PMID:35761023
Inferring functional communities from partially observed biological networks exploiting geometric topology and side information.
PMID:35760826
Context-aware deconvolution of cell-cell communication with Tensor-cell2cell.
PMID:35760817
Multi-omics reveals mechanisms of resistance to potato root infection by Spongospora subterranea.
PMID:35752627
Microbiome function underpins the efficacy of a fiber-supplemented dietary intervention in dogs with chronic large bowel diarrhea.
PMID:35751094
Adaptation insights from comparative transcriptome analysis of two Opisthopappus species in the Taihang mountains.
PMID:35751010
Resistance of Dickeya solani strain IPO 2222 to lytic bacteriophage ΦD5 results in fitness tradeoffs for the bacterium during infection.
PMID:35750797
CircRNAs in Xiang pig ovaries among diestrus and estrus stages.
PMID:35739583
Comprehensive bioinformatic analysis reveals a cancer-associated fibroblast gene signature as a poor prognostic factor and potential therapeutic target in gastric cancer.
PMID:35739492
Machine-learning algorithms based on personalized pathways for a novel predictive model for the diagnosis of hepatocellular carcinoma.
PMID:35739471
Cancer cells depend on environmental lipids for proliferation when electron acceptors are limited.
PMID:35739397
Predicting prognosis and clinical features of the tumor microenvironment based on ferroptosis score in patients with breast cancer.
PMID:35739315
A cerumenolomic approach to bovine trypanosomosis diagnosis.
PMID:35739279
Exploring the potential mechanism of emetine against coronavirus disease 2019 combined with lung adenocarcinoma: bioinformatics and molecular simulation analyses.
PMID:35733175
Antennal transcriptome analysis of olfactory genes and tissue expression profiling of odorant binding proteins in Semanotus bifasciatus (cerambycidae: coleoptera).
PMID:35733103
Transcriptome of the synganglion in the tick Ixodes ricinus and evolution of the cys-loop ligand-gated ion channel family in ticks.
PMID:35733088
Biosynthetic potential of the global ocean microbiome.
PMID:35732736
SILAC kinase screen identifies potential MASTL substrates.
PMID:35732702
Anti-lipolysis-stimulated lipoprotein receptor monoclonal antibody as a novel therapeutic agent for endometrial cancer.
PMID:35729527
Integrative transcriptome-wide analysis of atopic dermatitis for drug repositioning.
PMID:35729261
Presence of Blastocystis in gut microbiota is associated with cognitive traits and decreased executive function.
PMID:35729225
Common and distinctive genomic features of Klebsiella pneumoniae thriving in the natural environment or in clinical settings.
PMID:35729190
Hyaluronic acid-GPRC5C signalling promotes dormancy in haematopoietic stem cells.
PMID:35725769
Transcriptional changes in the peripheral blood leukocytes from Brangus cattle before and after tick challenge with Rhipicephalus australis.
PMID:35725367
Genome-wide association mapping and genomic prediction for pre‑harvest sprouting resistance, low α-amylase and seed color in Iranian bread wheat.
PMID:35715737
Plant Host Traits Mediated by Foliar Fungal Symbionts and Secondary Metabolites.
PMID:35713682
Integrated bioinformatics analysis reveals marker genes and immune infiltration for pulmonary arterial hypertension.
PMID:35710932
Integrated analysis reveals the pivotal interactions between immune cells in the melanoma tumor microenvironment.
PMID:35710862
Identification of HOX signatures contributing to oral cancer phenotype.
PMID:35710803
CF-Seq, an accessible web application for rapid re-analysis of cystic fibrosis pathogen RNA sequencing studies.
PMID:35710652
Identification of an inflammatory response signature associated with prognostic stratification and drug sensitivity in lung adenocarcinoma.
PMID:35710585
miRNA-mRNA analysis of sheep adrenal glands reveals the network regulating reproduction.
PMID:35710353
Genome-wide alternative splicing profile in the posterior kidney of brown trout (Salmo trutta) during proliferative kidney disease.
PMID:35710345
Identification of ferroptosis-related genes for overall survival prediction in hepatocellular carcinoma.
PMID:35705729
Combined transcriptome and metabolome analysis of Nerium indicum L. elaborates the key pathways that are activated in response to witches' broom disease.
PMID:35701735
Anticancer effects of herbal medicines in pancreatic ductal adenocarcinoma through modulation of steroid hormone response proteins.
PMID:35701649
Alterations in co-abundant bacteriome in colorectal cancer and its persistence after surgery: a pilot study.
PMID:35701595
AGE/RAGE axis regulates reversible transition to quiescent states of ALK-rearranged NSCLC and pancreatic cancer cells in monolayer cultures.
PMID:35701529
Transcriptomic and proteomic analyses of Cucurbita ficifolia Bouché (Cucurbitaceae) response to Fusarium oxysporum f.sp. cucumerium.
PMID:35698057
Differing coronavirus genres alter shared host signaling pathways upon viral infection.
PMID:35697915
Advances in understanding Norway spruce natural resistance to needle bladder rust infection: transcriptional and secondary metabolites profiling.
PMID:35692040
Novel App knock-in mouse model shows key features of amyloid pathology and reveals profound metabolic dysregulation of microglia.
PMID:35690868
Curcumin and metformin synergistically modulate peripheral and central immune mechanisms of pain.
PMID:35690654
Linear programming based gene expression model (LPM-GEM) predicts the carbon source for Bacillus subtilis.
PMID:35689204
Omics-based integrated analysis identified IKZF2 as a biomarker associated with lupus nephritis.
PMID:35688845
Impact of AADAC gene expression on prognosis in patients with Borrmann type III advanced gastric cancer.
PMID:35681154
The dynamic cellular and molecular features during the development of radiation proctitis revealed by transcriptomic profiling in mice.
PMID:35681125
Comparison of methods and resources for cell-cell communication inference from single-cell RNA-Seq data.
PMID:35680885
Semaphorin 4B promotes tumor progression and associates with immune infiltrates in lung adenocarcinoma.
PMID:35676688
Integrative analysis of expression profile indicates the ECM receptor and LTP dysfunction in the glioma-related epilepsy.
PMID:35676651
3-oxo-C12:2-HSL, quorum sensing molecule from human intestinal microbiota, inhibits pro-inflammatory pathways in immune cells via bitter taste receptors.
PMID:35676403
Exploring the mechanism and experimental verification of puerarin in the treatment of endometrial carcinoma based on network pharmacology and bioinformatics analysis.
PMID:35672846
Network pharmacology and in vivo experiments reveal the pharmacological effects and molecular mechanisms of Simiao Powder in prevention and treatment for gout.
PMID:35672755
Synergistic anti-proliferative activity of JQ1 and GSK2801 in triple-negative breast cancer.
PMID:35672711
Gene network analysis reveals candidate genes related with the hair follicle development in sheep.
PMID:35672687
Potential prognosis index for m6A-related mRNA in cholangiocarcinoma.
PMID:35672673
Comprehensive analysis of lncRNA-miRNA-mRNA networks during osteogenic differentiation of bone marrow mesenchymal stem cells.
PMID:35672672
Developing a bioinformatics pipeline for comparative protein classification analysis.
PMID:35668373
Evaluating the tumor immune profile based on a three-gene prognostic risk model in HER2 positive breast cancer.
PMID:35665772
Incubation of canine dermal fibroblasts with serum from dogs with atopic dermatitis activates extracellular matrix signalling and represses oxidative phosphorylation.
PMID:35665445
A synaptomic analysis reveals dopamine hub synapses in the mouse striatum.
PMID:35660742
Ecogenomics sheds light on diverse lifestyle strategies in freshwater CPR.
PMID:35659305
Transcriptional profiling of transport mechanisms and regulatory pathways in rat choroid plexus.
PMID:35659263
The correlation of EZH2 expression with the progression and prognosis of hepatocellular carcinoma.
PMID:35659256
UBE2S promotes the development of ovarian cancer by promoting PI3K/AKT/mTOR signaling pathway to regulate cell cycle and apoptosis.
PMID:35658829
Pyroptosis is related to immune infiltration and predictive for survival of colon adenocarcinoma patients.
PMID:35655081
The microbiome of cryospheric ecosystems.
PMID:35655063
Analysis of immune related gene expression profiles and immune cell components in patients with Barrett esophagus.
PMID:35654816
Leaf transcriptome profiling of contrasting sugarcane genotypes for drought tolerance under field conditions.
PMID:35650424
Identification of hub pathways and drug candidates in gastric cancer through systems biology.
PMID:35650297
Comparative transcriptome analysis of heat-induced domesticated zebrafish during gonadal differentiation.
PMID:35641933
A polyketide synthase from Verticillium dahliae modulates melanin biosynthesis and hyphal growth to promote virulence.
PMID:35637443
Single-cell transcriptomics of adult macaque hippocampus reveals neural precursor cell populations.
PMID:35637371
MSNovelist: de novo structure generation from mass spectra.
PMID:35637304
Comparative genomics highlight the importance of lineage-specific gene families in evolutionary divergence of the coral genus, Montipora.
PMID:35624412
Polyploid giant cancer cells are dependent on cholesterol for progeny formation through amitotic division.
PMID:35624221
Effect of berberine on global modulation of lncRNAs and mRNAs expression profiles in patients with stable coronary heart disease.
PMID:35619068
Autoreactive CD8+ T cells are restrained by an exhaustion-like program that is maintained by LAG3.
PMID:35618829
Identifying drivers of breast cancer metastasis in progressively invasive subpopulations of zebrafish-xenografted MDA-MB-231.
PMID:35614362
Lake microbiome and trophy fluctuations of the ancient hemp rettery.
PMID:35614182
Mast cell marker gene signature in head and neck squamous cell carcinoma.
PMID:35610596
Bioinformatics and Systems Biology of Circadian Rhythms: BIO_CYCLE and CircadiOmics.
PMID:35610420
Expression of ferroptosis-related gene correlates with immune microenvironment and predicts prognosis in gastric cancer.
PMID:35610340
Chromosome-scale genome assembly of an important medicinal plant honeysuckle.
PMID:35610245
Disruption of β-catenin-mediated negative feedback reinforces cAMP-induced neuronal differentiation in glioma stem cells.
PMID:35610201
Transcriptome analysis reveals fluid shear stress (FSS) and atherosclerosis pathway as a candidate molecular mechanism of short-term low salinity stress tolerance in abalone.
PMID:35606721
Alanine-specific appetite in slow growing chickens is associated with impaired glucose transport and TCA cycle.
PMID:35606689
Signal requirement for cortical potential of transplantable human neuroepithelial stem cells.
PMID:35606347
Blood transcriptomics identifies immune signatures indicative of infectious complications in childhood cancer patients with febrile neutropenia.
PMID:35602885
Integrative Analysis of lncRNA-miRNA-mRNA Regulatory Network Reveals the Key lncRNAs Implicated Potentially in the Differentiation of Adipocyte in Goats.
PMID:35600305
RNA-seq analysis of extracellular vesicles from hyperphosphatemia-stimulated endothelial cells provides insight into the mechanism underlying vascular calcification.
PMID:35597927
Combined use of specific length amplified fragment sequencing (SLAF-seq) and bulked segregant analysis (BSA) for rapid identification of genes influencing fiber content of hemp (Cannabis sativa L.).
PMID:35596150
Effects of the repression of GIGANTEA gene StGI.04 on the potato leaf transcriptome and the anthocyanin content of tuber skin.
PMID:35596149
Relationship between gene expression networks and muscle contractile physiology differences in Anolis lizards.
PMID:35596083
PI3K/AKT/mTOR Pathway-Associated Genes Reveal a Putative Prognostic Signature Correlated with Immune Infiltration in Hepatocellular Carcinoma.
PMID:35592706
Identification of Alzheimer's Disease Molecular Subtypes Based on Parallel Large-Scale Sequencing.
PMID:35592696
Identification and Verification of m7G Modification Patterns and Characterization of Tumor Microenvironment Infiltration via Multi-Omics Analysis in Clear Cell Renal Cell Carcinoma.
PMID:35592316
Mitogen-activated protein kinase 4 is obligatory for late pollen and early fruit development in tomato.
PMID:35591931
The potential effects and mechanisms of hispidulin in the treatment of diabetic retinopathy based on network pharmacology.
PMID:35590353
KDM3A-mediated SP1 activates PFKFB4 transcription to promote aerobic glycolysis in osteosarcoma and augment tumor development.
PMID:35590288
Transcriptome sequencing reveals the differentially expressed lncRNAs and mRNAs in response to cold acclimation and cold stress in Pomacea canaliculata.
PMID:35590244
Exploring the underlying molecular mechanism of liver cancer cells under hypoxia based on RNA sequencing.
PMID:35590240
Effects of interleukin 1β on long noncoding RNA and mRNA expression profiles of human synovial fluid derived mesenchymal stem cells.
PMID:35589865
PCBP1 is associated with rheumatoid arthritis by affecting RNA products of genes involved in immune response in Th1 cells.
PMID:35589811
Identification of AKIRIN2 as a potential biomarker and correlation with immunotherapy in gastric adenocarcinoma by integrated bioinformatics analysis.
PMID:35589807
Exploration of the Potential Mechanism of the Common Differentially Expressed Genes in Psoriasis and Atopic Dermatitis.
PMID:35586812
Drug-Drug Interactions Prediction Using Fingerprint Only.
PMID:35586666
Horizontal gene transfer drives the evolution of dependencies in bacteria.
PMID:35586069
Comparative genome analysis among Variovorax species and genome guided aromatic compound degradation analysis emphasizing 4-hydroxybenzoate degradation in Variovorax sp. PAMC26660.
PMID:35585492
Transcriptome and metabolome reveal the accumulation of secondary metabolites in different varieties of Cinnamomum longepaniculatum.
PMID:35585490
Distinct gene clusters drive formation of ferrosome organelles in bacteria.
PMID:35585231
Construction and comprehensive analysis of a lncRNA-mRNA interactive network to reveal a potential lncRNA for hepatic encephalopathy development.
PMID:35583799
Radiogenomic analysis of primary breast cancer reveals [18F]-fluorodeoxglucose dynamic flux-constants are positively associated with immune pathways and outperform static uptake measures in associating with glucose metabolism.
PMID:35581637
SYNJ2 is a novel and potential biomarker for the prediction and treatment of cancers: from lung squamous cell carcinoma to pan-cancer.
PMID:35581615
An immune gene signature to predict prognosis and immunotherapeutic response in lung adenocarcinoma.
PMID:35581376
Identification of miRNA biomarkers for stomach adenocarcinoma.
PMID:35578189
Analysis of circRNAs and circRNA-associated competing endogenous RNA networks in β-thalassemia.
PMID:35577924
Prediction of gestational age using urinary metabolites in term and preterm pregnancies.
PMID:35577875
A Prognostic Gene Signature for Hepatocellular Carcinoma.
PMID:35574316
Eutrema EsMYB90 Gene Improves Growth and Antioxidant Capacity of Transgenic Wheat Under Salinity Stress.
PMID:35574106
Tetraploidy in Citrus wilsonii Enhances Drought Tolerance via Synergistic Regulation of Photosynthesis, Phosphorylation, and Hormonal Changes.
PMID:35574073
Comparative Metabolomics and Lipidomics of Four Juvenoids Application to Scylla paramamosain Hepatopancreas: Implications of Lipid Metabolism During Ovarian Maturation.
PMID:35574001
Microbiota-Associated Biofilm Regulation Leads to Vibrio cholerae Resistance Against Intestinal Environmental Stress.
PMID:35573801
RNA-Seq Based Toxicity Analysis of Mesoporous Polydopamine Nanoparticles in Mice Following Different Exposure Routes.
PMID:35573233
Identification of lncRNA Biomarkers and LINC01198 Promotes Progression of Chronic Rhinosinusitis with Nasal Polyps through Sponge miR-6776-5p.
PMID:35572732
lncRNA-mRNA Expression Patterns in Invasive Pituitary Adenomas: A Microarray Analysis.
PMID:35572729
Metagenomic-Metabolomic Mining of Kinema, a Naturally Fermented Soybean Food of the Eastern Himalayas.
PMID:35572705
Identification of significant genes with a poor prognosis in skin cutaneous malignant melanoma based on a bioinformatics analysis.
PMID:35571409
Potential for reversing miR-634-mediated cytoprotective processes to improve efficacy of chemotherapy against oral squamous cell carcinoma.
PMID:35571376
BioTAGME: A Comprehensive Platform for Biological Knowledge Network Analysis.
PMID:35571058
Gene Expression Profiling of Glioblastoma to Recognize Potential Biomarker Candidates.
PMID:35571016
Small RNA sequencing and identification of papaya (Carica papaya L.) miRNAs with potential cross-kingdom human gene targets.
PMID:35570207
Integrative analysis identifies CXCL11 as an immune-related prognostic biomarker correlated with cell proliferation and immune infiltration in multiple myeloma microenvironment.
PMID:35568859
A novel strategy for optimal component formula of anti-PRRSV from natural compounds using tandem mass tag labeled proteomic analyses.
PMID:35568854
RNF38 suppress growth and metastasis via ubiquitination of ACTN4 in nasopharyngeal carcinoma.
PMID:35568845
Dynamic changes in fecal bacterial microbiota of dairy cattle across the production line.
PMID:35568809
Diabetes risk loci-associated pathways are shared across metabolic tissues.
PMID:35568807
Modelling liver cancer microenvironment using a novel 3D culture system.
PMID:35568708
Coordination Chemistry of Nucleotides and Antivirally Active Acyclic Nucleoside Phosphonates, including Mechanistic Considerations.
PMID:35565975
Identification of Genes Related to Squab Muscle Growth and Lipid Metabolism from Transcriptome Profiles of Breast Muscle and Liver in Domestic Pigeon (Columba livia).
PMID:35565488
Genome-Scale Metabolic Model Analysis of Metabolic Differences between Lauren Diffuse and Intestinal Subtypes in Gastric Cancer.
PMID:35565469
A Data Science Approach for the Identification of Molecular Signatures of Aggressive Cancers.
PMID:35565454
Space- and Time-Resolved Metabolomics of a High-Grade Serous Ovarian Cancer Mouse Model.
PMID:35565391
Analytical Considerations of Large-Scale Aptamer-Based Datasets for Translational Applications.
PMID:35565358
Cancer Metabolic Subtypes and Their Association with Molecular and Clinical Features.
PMID:35565274
Fast, Ungapped Reads Mapping Using Squid.
PMID:35564837
Integrated Multiomics Analysis of Salivary Exosomes to Identify Biomarkers Associated with Changes in Mood States and Fatigue.
PMID:35563647
Artificial Intelligence Predictor for Alzheimer's Disease Trained on Blood Transcriptome: The Role of Oxidative Stress.
PMID:35563628
RNA-Seq, Bioinformatic Identification of Potential MicroRNA-like Small RNAs in the Edible Mushroom Agaricus bisporus and Experimental Approach for Their Validation.
PMID:35563314
Transcriptome Analysis of the Cf-13-Mediated Hypersensitive Response of Tomato to Cladosporium fulvum Infection.
PMID:35563232
Nitric Oxide Enhanced Salt Stress Tolerance in Tomato Seedlings, Involving Phytohormone Equilibrium and Photosynthesis.
PMID:35562930
Identification and validation of TNFRSF4 as a high-profile biomarker for prognosis and immunomodulation in endometrial carcinoma.
PMID:35562682
Diagnostic and prognostic values of pyroptosis-related genes for the hepatocellular carcinoma.
PMID:35562678
Integrated computational analysis reveals HOX genes cluster as oncogenic drivers in head and neck squamous cell carcinoma.
PMID:35562533
Differential expression analysis of genes and long non-coding RNAs associated with KRAS mutation in colorectal cancer cells.
PMID:35562390
Boost-RS: boosted embeddings for recommender systems and its application to enzyme-substrate interaction prediction.
PMID:35561204
Driver gene detection through Bayesian network integration of mutation and expression profiles.
PMID:35561191
Identification of Potential Diagnoses Based on Immune Infiltration and Autophagy Characteristics in Major Depressive Disorder.
PMID:35559009
Microbiomes and Planctomycete diversity in large-scale aquaria habitats.
PMID:35551553
The Immunometabolic Atlas: A tool for design and interpretation of metabolomics studies in immunology.
PMID:35550647
Chromosome-level genome assembly of Asian yellow pond turtle (Mauremys mutica) with temperature-dependent sex determination system.
PMID:35550586
Role of CD68 in tumor immunity and prognosis prediction in pan-cancer.
PMID:35550532
System-level investigation of anti-obesity effects and the potential pathways of Cordyceps militaris in ovariectomized rats.
PMID:35550138
Deciphering the Underlying Mechanisms of Formula Le-Cao-Shi Against Liver Injuries by Integrating Network Pharmacology, Metabonomics, and Experimental Validation.
PMID:35548342
A Comparative Study of Flavonoids and Carotenoids Revealed Metabolite Responses for Various Flower Colorations Between Nicotiana tabacum L. and Nicotiana rustica L.
PMID:35548319
Genome-Wide Identification and Expression Profiling of KCS Gene Family in Passion Fruit (Passiflora edulis) Under Fusarium kyushuense and Drought Stress Conditions.
PMID:35548275
Metabolomics Applied to Cord Serum in Preeclampsia Newborns: Implications for Neonatal Outcomes.
PMID:35547553
Role of tRNA derived fragments in renal ischemia-reperfusion injury.
PMID:35546262
Interactive analysis of biosurfactants in fruit-waste fermentation samples using BioSurfDB and MEGAN.
PMID:35546170
The transcriptome-wide N6-methyladenosine (m6A) map profiling reveals the regulatory role of m6A in the yak ovary.
PMID:35538402
Impact of salivary and pancreatic amylase gene copy numbers on diabetes, obesity, and functional profiles of microbiome in Northern Japanese population.
PMID:35538098
Artificial intelligence in cancer target identification and drug discovery.
PMID:35538061
Comparative transcriptome analysis of resistant and susceptible wheat in response to Rhizoctonia cerealis.
PMID:35534832
Combined morpho-physiological, ionomic and transcriptomic analyses reveal adaptive responses of allohexaploid wheat (Triticum aestivum L.) to iron deficiency.
PMID:35534803
Integrated transcriptome and endogenous hormone analysis provides new insights into callus proliferation in Osmanthus fragrans.
PMID:35534621
Comprehensive computational analysis reveals H5N1 influenza virus-encoded miRNAs and host-specific targets associated with antiviral immune responses and protein binding.
PMID:35533150
Profiling senescent cells in human brains reveals neurons with CDKN2D/p19 and tau neuropathology.
PMID:35531351
Mining the prognostic significance and immune infiltration of STAT family members in human breast cancer by bioinformatics analysis.
PMID:35531108
Computational Analysis of the Immune Infiltration Pattern and Candidate Diagnostic Biomarkers in Lumbar Disc Herniation.
PMID:35531067
Biomarkers of PEGylated Liposomal Doxorubicin-Induced Hypersensitivity Reaction in Breast Cancer Patients Based on Metabolomics.
PMID:35529437
Association Studies of Environmental Exposures, DNA Methylation and Children's Cognitive, Behavioral, and Mental Health Problems.
PMID:35528545
Discovering Common Pathophysiological Processes between COVID-19 and Cystic Fibrosis by Differential Gene Expression Pattern Analysis.
PMID:35528173
Identification and validation of an epigenetically regulated long noncoding RNA model for breast cancer metabolism and prognosis.
PMID:35525949
Integrated analysis of lncRNAs and mRNAs by RNA-Seq in secondary hair follicle development and cycling (anagen, catagen and telogen) of Jiangnan cashmere goat (Capra hircus).
PMID:35524260
The identification of miRNA and mRNA expression profiles associated with pediatric atypical teratoid/rhabdoid tumor.
PMID:35524230
Microbial community functioning during plant litter decomposition.
PMID:35523988
Rheumatoid arthritis T cell and muscle oxidative metabolism associate with exercise-induced changes in cardiorespiratory fitness.
PMID:35523821
RhoA-ROCK competes with YAP to regulate amoeboid breast cancer cell migration in response to lymphatic-like flow.
PMID:35520391
Elevated α-Ketoglutaric Acid Concentrations and a Lipid-Balanced Signature Are the Key Factors in Long-Term HIV Control.
PMID:35514981
Bacterial community mapping of the intestinal tract in acute pancreatitis rats based on 16S rDNA gene sequence analysis.
PMID:35514649
A deep learning approach for orphan gene identification in moso bamboo (Phyllostachys edulis) based on the CNN + Transformer model.
PMID:35513802
Changes in chemical composition, structural and functional microbiome during alfalfa (Medicago sativa) ensilage with Lactobacillus plantarum PS-8.
PMID:35509811
Response of the Anaerobic Methanotrophic Archaeon Candidatus "Methanoperedens nitroreducens" to the Long-Term Ferrihydrite Amendment.
PMID:35509320
Anthocyanin regulatory networks in Solanum tuberosum L. leaves elucidated via integrated metabolomics, transcriptomics, and StAN1 overexpression.
PMID:35508980
Different effects of hydrogen-rich water intake and hydrogen gas inhalation on gut microbiome and plasma metabolites of rats in health status.
PMID:35508571
Network pharmacology combined with molecular docking to explore the potential mechanisms for the antioxidant activity of Rheum tanguticum seeds.
PMID:35505340
Integrative analysis of circRNA, miRNA, and mRNA profiles to reveal ceRNA regulation in chicken muscle development from the embryonic to post-hatching periods.
PMID:35505302
Associations of keratinocyte cancers with snp variants in the sonic hedgehog pathway.
PMID:35505292
Rice (Oryza sativa L.) cytochrome P450 protein 716A subfamily CYP716A16 regulates disease resistance.
PMID:35505282
Circulating microRNA sequencing revealed miRNome patterns in hematology and oncology patients aiding the prognosis of invasive aspergillosis.
PMID:35504997
Integrated analysis of mRNA and long noncoding RNA profiles in peripheral blood mononuclear cells of patients with bronchial asthma.
PMID:35501805
High MICAL-L2 expression and its role in the prognosis of colon adenocarcinoma.
PMID:35501725
Gene expression profiling of RIP2-knockdown in HD11 macrophages - elucidation of potential pathways (gene network) when challenged with avian pathogenic E.coli (APEC).
PMID:35501708
Bacterial communities associated with silage of different forage crops in Malaysian climate analysed using 16S amplicon metagenomics.
PMID:35501317
Genetic divergence and functional convergence of gut bacteria between the Eastern honey bee Apis cerana and the Western honey bee Apis mellifera.
PMID:35499050
Virtual screening and docking analysis of novel ligands for selective enhancement of tea (Camellia sinensis) flavonoids.
PMID:35498963
Macroaggregates Serve as Micro-Hotspots Enriched With Functional and Networked Microbial Communities and Enhanced Under Organic/Inorganic Fertilization in a Paddy Topsoil From Southeastern China.
PMID:35495701
Comparative Analysis of the Chalcone-Flavanone Isomerase Genes in Six Citrus Species and Their Expression Analysis in Sweet Orange (Citrus sinensis).
PMID:35495138
Differential expression of circulating miRNAs after alemtuzumab induction therapy in lung transplantation.
PMID:35490174
Identification of an autophagy-related gene signature for predicting prognosis and immune activity in pancreatic adenocarcinoma.
PMID:35488119
Proteomics of lung tissue reveals differences in inflammation and alveolar-capillary barrier response between atelectasis and aerated regions.
PMID:35487970
Prognostic biomarker SGSM1 and its correlation with immune infiltration in gliomas.
PMID:35484511
Transcriptome and metabolome analyses reveal new insights into chlorophyll, photosynthesis, metal ion and phenylpropanoids related pathways during sugarcane ratoon chlorosis.
PMID:35484490
Network pharmacology analysis and experimental validation to explore the mechanism of Bushao Tiaozhi capsule (BSTZC) on hyperlipidemia.
PMID:35484204
Identification and validation of prognosis-associated DNA repair gene signatures in colorectal cancer.
PMID:35484177
Chromosome-Level Genome Assembly of the Hemiparasitic Taxillus chinensis (DC.) Danser.
PMID:35482027
Innovation and tinkering in the evolution of oxidases.
PMID:35481655
m6A Regulator-Mediated RNA Methylation Modification Patterns are Involved in the Pathogenesis and Immune Microenvironment of Depression.
PMID:35480327
Transcriptome Analysis and Identification of the Cholesterol Side Chain Cleavage Enzyme BbgCYP11A1 From Bufo bufo gargarizans.
PMID:35480310
Metatranscriptomic Analysis of Corals Inoculated With Tolerant and Non-Tolerant Symbiont Exposed to High Temperature and Light Stress.
PMID:35480050
A Cancer Associated Fibroblasts-Related Six-Gene Panel for Anti-PD-1 Therapy in Melanoma Driven by Weighted Correlation Network Analysis and Supervised Machine Learning.
PMID:35479936
Characterization of differential gene expression of broiler chicken to thermal stress in discrete developmental stages.
PMID:35479510
The identification of liver metastasis- and prognosis-associated genes in pancreatic ductal adenocarcinoma.
PMID:35477379
Gene-SCOUT: identifying genes with similar continuous trait fingerprints from phenome-wide association analyses.
PMID:35474393
Integrative analysis of TCGA data identifies miRNAs as drug-specific survival biomarkers.
PMID:35474090
Effect of acute high-intensity exercise on myocardium metabolic profiles in rat and human study via metabolomics approach.
PMID:35473956
Network- and enrichment-based inference of phenotypes and targets from large-scale disease maps.
PMID:35473910
Antibacterial activities and action mode of anti-hyperlipidemic lomitapide against Staphylococcus aureus.
PMID:35473561
Metagenomic analysis reveals the different characteristics of microbial communities inside and outside the karst tiankeng.
PMID:35473500
Prediction of pregnancy-related hypertensive disorders using metabolomics: a systematic review.
PMID:35470187
Transcriptomic analysis of OsRUS1 overexpression rice lines with rapid and dynamic leaf rolling morphology.
PMID:35468979
Deletion and tandem duplications of biosynthetic genes drive the diversity of triterpenoids in Aralia elata.
PMID:35468919
Machine learning assisted analysis of breast cancer gene expression profiles reveals novel potential prognostic biomarkers for triple-negative breast cancer.
PMID:35465161
A Toolkit for Profiling the Immune Landscape of Pediatric Central Nervous System Malignancies.
PMID:35464481
The Potential of Metabolism-Related Gene OGDHL as a Biomarker for Myocardial Remodeling in Dilated Cardiomyopathy.
PMID:35463769
Integrated Bioinformatics-Based Analysis of Hub Genes and the Mechanism of Immune Infiltration Associated With Acute Myocardial Infarction.
PMID:35463752
Postnatal Smad3 Inactivation in Murine Smooth Muscle Cells Elicits a Temporally and Regionally Distinct Transcriptional Response.
PMID:35463747
Psoriasis Vulgaris of Blood Heat Syndrome in Plasma Based on Widely Targeted Techniques.
PMID:35463691
Analysis of the Molecular Mechanism of Evodia rutaecarpa Fruit in the Treatment of Nasopharyngeal Carcinoma Using Network Pharmacology and Molecular Docking.
PMID:35463684
A Pilot Study Exploring the Association of Entacapone, Gut Microbiota, and the Subsequent Side Effects in Patients With Parkinson's Disease.
PMID:35463646
Unraveling the expression of differentially expressed proteins and enzymatic activity in response to Phytophthora nicotianae across different flue-cured tobacco cultivars.
PMID:35461247
Identification of the potential biological target molecules related to primary open-angle glaucoma.
PMID:35461232
Transcriptome analysis of fasudil treatment in the APPswe/PSEN1dE9 transgenic (APP/PS1) mice model of Alzheimer's disease.
PMID:35459923
ADAM12 is an independent predictor of poor prognosis in liver cancer.
PMID:35459884
A cross-sectional analysis about bacterial vaginosis, high-risk human papillomavirus infection, and cervical intraepithelial neoplasia in Chinese women.
PMID:35459771
Ferroptosis-related lncRNA signature predicts the prognosis and immune microenvironment of hepatocellular carcinoma.
PMID:35459272
GC/MS-based 13C metabolic flux analysis resolves the parallel and cyclic photomixotrophic metabolism of Synechocystis sp. PCC 6803 and selected deletion mutants including the Entner-Doudoroff and phosphoketolase pathways.
PMID:35459213
The Potential Antipyretic Mechanism of Ellagic Acid with Brain Metabolomics Using Rats with Yeast-Induced Fever.
PMID:35458665
The Genome of Bacillus velezensis SC60 Provides Evidence for Its Plant Probiotic Effects.
PMID:35456817
Responses of Phyllosphere Microbiome to Ozone Stress: Abundance, Community Compositions and Functions.
PMID:35456732
Additive and Interactive Genetically Contextual Effects of HbA1c on cg19693031 Methylation in Type 2 Diabetes.
PMID:35456489
Identification of Potential Key Genes in Prostate Cancer with Gene Expression, Pivotal Pathways and Regulatory Networks Analysis Using Integrated Bioinformatics Methods.
PMID:35456461
Transcriptomic and Proteomic Analysis of Marine Nematode Litoditis marina Acclimated to Different Salinities.
PMID:35456458
Ovarian Transcriptomic Analysis of Ninghai Indigenous Chickens at Different Egg-Laying Periods.
PMID:35456401
A Novel Transcription Factor VPA0041 Was Identified to Regulate the Swarming Motility in Vibrio parahaemolyticus.
PMID:35456128
Treatment with Ad5-Porcine Interferon-α Attenuates Ebolavirus Disease in Pigs.
PMID:35456124
Key Signaling in Alcohol-Associated Liver Disease: The Role of Bile Acids.
PMID:35456053
Sphingolipid Metabolism as a New Predictive Target Correlated with Aging and AD: A Transcriptomic Analysis.
PMID:35454332
Darling: A Web Application for Detecting Disease-Related Biomedical Entity Associations with Literature Mining.
PMID:35454109
Semen Modulates Cell Proliferation and Differentiation-Related Transcripts in the Pig Peri-Ovulatory Endometrium.
PMID:35453814
Prostanoid Signaling in Cancers: Expression and Regulation Patterns of Enzymes and Receptors.
PMID:35453789
RNA-seq and Mitochondrial DNA Analysis of Adrenal Gland Metastatic Tissue in a Patient with Renal Cell Carcinoma.
PMID:35453788
Plasma miRNA Profile of Crohn's Disease and Rheumatoid Arthritis Patients.
PMID:35453708
Osteopontin-A Potential Biomarker for IgA Nephropathy: Machine Learning Application.
PMID:35453484
Integrative Proteome and Ubiquitinome Analyses Reveal the Substrates of BTBD9 and Its Underlying Mechanism in Sleep Regulation.
PMID:35449961
Comparative analysis of long noncoding RNA and mRNA expression provides insights into adaptation to hypoxia in Tibetan sheep.
PMID:35449433
Genomes of leafy and leafless Platanthera orchids illuminate the evolution of mycoheterotrophy.
PMID:35449401
Single-cell transcriptomics identifies Mcl-1 as a target for senolytic therapy in cancer.
PMID:35449130
Profiling the lncRNA-miRNA-mRNA interaction network in the submandibular gland of diabetic mice.
PMID:35449001
Modular and mechanistic changes across stages of colorectal cancer.
PMID:35448980
Transcriptome analysis of the growth-promoting effect of volatile organic compounds produced by Microbacterium aurantiacum GX14001 on tobacco (Nicotiana benthamiana).
PMID:35448945
Comparative transcriptomic analyses of citrus cold-resistant vs. sensitive rootstocks might suggest a relevant role of ABA signaling in triggering cold scion adaption.
PMID:35448939
Rewiring of the Liver Transcriptome across Multiple Time-Scales Is Associated with the Weight Loss-Independent Resolution of NAFLD Following RYGB.
PMID:35448506
Network Reconstruction and Modelling Made Reproducible with moped.
PMID:35448462
An Extracytoplasmic Function Sigma Factor Required for Full Virulence in Xanthomonas citri pv. citri.
PMID:35446118
In-Silico Functional Annotation of Plasmodium falciparum Hypothetical Proteins to Identify Novel Drug Targets.
PMID:35444689
Genetic Modeling and Genomic Analyses of Yearling Temperament in American Angus Cattle and Its Relationship With Productive Efficiency and Resilience Traits.
PMID:35444687
The Effects of Sesquiterpene Lactones on the Differentiation of Human or Animal Cells Cultured In-Vitro: A Critical Systematic Review.
PMID:35444549
Identification of Immune-Related Key Genes as Potential Diagnostic Biomarkers of Sepsis in Children.
PMID:35444449
Chemotaxis shapes the microscale organization of the ocean's microbiome.
PMID:35444277
Inflammatory response mediates cross-talk with immune function and reveals clinical features in acute myeloid leukemia.
PMID:35441668
Long-term artificial selection of Hanwoo (Korean) cattle left genetic signatures for the breeding traits and has altered the genomic structure.
PMID:35440706
Identification of ubiquitin-specific protease 32 as an oncogene in glioblastoma and the underlying mechanisms.
PMID:35440702
Tanshinone I attenuates fibrosis in fibrotic kidneys through down-regulation of inhibin beta-A.
PMID:35439976
De novo identification of maximally deregulated subnetworks based on multi-omics data with DeRegNet.
PMID:35439941
Small HSPs play an important role in crosstalk between HSF-HSP and ROS pathways in heat stress response through transcriptomic analysis in lilies (Lilium longiflorum).
PMID:35439940
Gene expression profiles provide insights into the survival strategies in deep-sea mussel (Bathymodiolus platifrons) of different developmental stages.
PMID:35439939
Improving ovarian cancer treatment decision using a novel risk predictive tool.
PMID:35439731
Transcriptomics Coupled to Proteomics Reveals Novel Targets for the Protective Role of Spermine in Diabetic Cardiomyopathy.
PMID:35437457
Construction of a circRNA-Mediated ceRNA Network Reveals Novel Biomarkers for Aortic Dissection.
PMID:35437351
Integrative analysis of key microRNA-mRNA complexes and pathways in aortic aneurysm.
PMID:35433971
Integrated Bioinformatics Algorithms and Experimental Validation to Explore Robust Biomarkers and Landscape of Immune Cell Infiltration in Dilated Cardiomyopathy.
PMID:35433865
Integrative Analyses of Circulating mRNA and lncRNA Expression Profile in Plasma of Lung Cancer Patients.
PMID:35433477
lncRNA CDKN2B-AS1 Could Be an Indicator to Identify Prognosis and Status of Immune Microenvironment in Thyroid Cancer.
PMID:35432631
Chromosome-Level Genome Assembly of Bupleurum chinense DC Provides Insights Into the Saikosaponin Biosynthesis.
PMID:35432473
Combined Hypothesis Testing on Graphs with Applications to Gene Set Enrichment Analysis.
PMID:35431372
MCTR3 reprograms arthritic monocytes to upregulate Arginase-1 and exert pro-resolving and tissue-protective functions in experimental arthritis.
PMID:35430453
Oogenesis and lipid metabolism in the deep-sea sponge Phakellia ventilabrum (Linnaeus, 1767).
PMID:35428825
Transcriptome analysis reveals anthocyanin regulation in Chinese cabbage (Brassica rapa L.) at low temperatures.
PMID:35428824
Transcriptome profiling of flower buds of male-sterile lines provides new insights into male sterility mechanism in alfalfa.
PMID:35428186
Discovery of moiety preference by Shapley value in protein kinase family using random forest models.
PMID:35428180
Network pharmacology-based analysis for unraveling potential cancer-related molecular targets of Egyptian propolis phytoconstituents accompanied with molecular docking and in vitro studies.
PMID:35423607
Potential therapeutic targets and molecular details of anthocyan-treated inflammatory bowel disease: a systematic bioinformatics analysis of network pharmacology.
PMID:35423341
Identification and Validation of Immune Cells and Hub Genes in Gastric Cancer Microenvironment.
PMID:35422890
Bioinformatics Analysis Identified the Hub Genes, mRNA-miRNA-lncRNA Axis, and Signaling Pathways Involved in Rheumatoid Arthritis Pathogenesis.
PMID:35422654
Interactive single-cell data analysis using Cellar.
PMID:35422041
Proteomics analysis: inhibiting the expression of P62 protein by chloroquine combined with dacarbazine can reduce the malignant progression of uveal melanoma.
PMID:35421957
SNCA correlates with immune infiltration and serves as a prognostic biomarker in lung adenocarcinoma.
PMID:35421944
Structural and Evolutionary Adaptations of Nei-Like DNA Glycosylases Proteins Involved in Base Excision Repair of Oxidative DNA Damage in Vertebrates.
PMID:35419164
Computed Tomography Imaging-Based Radiogenomics Analysis Reveals Hypoxia Patterns and Immunological Characteristics in Ovarian Cancer.
PMID:35418998
A draft genome of Drung cattle reveals clues to its chromosomal fusion and environmental adaptation.
PMID:35418663
MicroRNA profiles in aqueous humor between pseudoexfoliation glaucoma and normal tension glaucoma patients in a Korean population.
PMID:35418653
Vero cells gain renal tubule markers in low-calcium and magnesium chemically defined media.
PMID:35418617
Integration of Aspergillus niger transcriptomic profile with metabolic model identifies potential targets to optimise citric acid production from lignocellulosic hydrolysate.
PMID:35418297
Molecular signatures of tumor progression in pancreatic adenocarcinoma identified by energy metabolism characteristics.
PMID:35418066
An Integrated Approach to Recognize Potential Protective Effects of Culinary Herbs Against Chronic Diseases.
PMID:35415428
Bovine host genome acts on rumen microbiome function linked to methane emissions.
PMID:35414107
Aggresome assembly at the centrosome is driven by CP110-CEP97-CEP290 and centriolar satellites.
PMID:35411088
Unchecked oxidative stress in skeletal muscle prevents outgrowth of disseminated tumour cells.
PMID:35411081
Multiomics implicate gut microbiota in altered lipid and energy metabolism in Parkinson's disease.
PMID:35411052
Clone and Function Verification of the OPR gene in Brassica napus Related to Linoleic Acid Synthesis.
PMID:35410118
Candidate Genes and Pathways in Rice Co-Responding to Drought and Salt Identified by gcHap Network.
PMID:35409377
Bioinformatics Screening of Potential Biomarkers from mRNA Expression Profiles to Discover Drug Targets and Agents for Cervical Cancer.
PMID:35409328
TNF-α Induced Myotube Atrophy in C2C12 Cell Line Uncovers Putative Inflammatory-Related lncRNAs Mediating Muscle Wasting.
PMID:35409236
Identification and New Indication of Melanin-Concentrating Hormone Receptor 1 (MCHR1) Antagonist Derived from Machine Learning and Transcriptome-Based Drug Repositioning Approaches.
PMID:35409167
Transcriptome Analysis of Populus euphratica under Salt Treatment and PeERF1 Gene Enhances Salt Tolerance in Transgenic Populus alba × Populus glandulosa.
PMID:35409087
Circulating Vitreous microRNA as Possible Biomarker in High Myopic Eyes with Macular Hole.
PMID:35409006
In Silico Characterisation of the Late Embryogenesis Abundant (LEA) Protein Families and Their Role in Desiccation Tolerance in Ramonda serbica Panc.
PMID:35408906
miRNAs Contained in Extracellular Vesicles Cargo Contribute to the Progression of Idiopathic Pulmonary Fibrosis: An In Vitro Aproach.
PMID:35406675
Robust Validation and Comprehensive Analysis of a Novel Signature Derived from Crucial Metabolic Pathways of Pancreatic Ductal Adenocarcinoma.
PMID:35406597
TIA1 Loss Exacerbates Fatty Liver Disease but Exerts a Dual Role in Hepatocarcinogenesis.
PMID:35406476
Transcriptional CDK Inhibitors as Potential Treatment Option for Testicular Germ Cell Tumors.
PMID:35406461
Investigation of the Effect of Curcumin on Protein Targets in NAFLD Using Bioinformatic Analysis.
PMID:35405942
Integrative Analyses of Antler Cartilage Transcriptome and Proteome of Gansu Red Deer (Cervus elaphus kansuensis) at Different Growth Stages.
PMID:35405922
Cardiovascular signatures of COVID-19 predict mortality and identify barrier stabilizing therapies.
PMID:35405523
Evaluation of Host Depletion and Extraction Methods for Shotgun Metagenomic Analysis of Bovine Vaginal Samples.
PMID:35404108
Similarity-Based Method with Multiple-Feature Sampling for Predicting Drug Side Effects.
PMID:35401786
Integrative Analysis of Elicitor-Induced Camptothecin Biosynthesis in Camptotheca acuminata Plantlets Through a Combined Omics Approach.
PMID:35401649
Preclinical Studies on Convalescent Human Immune Plasma-Derived Exosome: Omics and Antiviral Properties to SARS-CoV-2.
PMID:35401544
A new finding in the key prognosis-related proto-oncogene FYN in hepatocellular carcinoma based on the WGCNA hub-gene screening trategy.
PMID:35397600
Integrative proteomic characterization of trace FFPE samples in early-stage gastrointestinal cancer.
PMID:35397555
Identification of microRNA-mRNA-TF regulatory networks in periodontitis by bioinformatics analysis.
PMID:35397550
A new nomogram model for prognosis of hepatocellular carcinoma based on novel gene signature that regulates cross-talk between immune and tumor cells.
PMID:35397536
Pan-cancer analysis on the role of PIK3R1 and PIK3R2 in human tumors.
PMID:35395865
Inter-species Metabolic Interactions in an In-vitro Minimal Human Gut Microbiome of Core Bacteria.
PMID:35395818
TGF-β induced reprogramming and drug resistance in triple-negative breast cells.
PMID:35395809
Zinc supplementation modifies brain tissue transcriptome of Apis mellifera honeybees.
PMID:35395723
Oxylipin profile in saliva from patients with cystic fibrosis reveals a balance between pro-resolving and pro-inflammatory molecules.
PMID:35393448
Large-scale analysis of MicroRNA expression in motor neuron-like cells derived from human umbilical cord blood mesenchymal stem cells.
PMID:35393444
Providing Adverse Outcome Pathways from the AOP-Wiki in a Semantic Web Format to Increase Usability and Accessibility of the Content.
PMID:35388368
CircUBE2Q2 promotes differentiation of cattle muscle stem cells and is a potential regulatory molecule of skeletal muscle development.
PMID:35387588
Use of a Minimal Microbial Consortium to Determine the Origin of Kombucha Flavor.
PMID:35387069
Expansion of Schizophrenia Gene Network Knowledge Using Machine Learning Selected Signals From Dorsolateral Prefrontal Cortex and Amygdala RNA-seq Data.
PMID:35386517
Obesity influences composition of salivary and fecal microbiota and impacts the interactions between bacterial taxa.
PMID:35384379
A high-quality assembly reveals genomic characteristics, phylogenetic status, and causal genes for leucism plumage of Indian peafowl.
PMID:35383847
Feedlot diets containing different starch levels and additives change the cecal proteome involved in cattle's energy metabolism and inflammatory response.
PMID:35383279
Plasma proteomics reveals crosstalk between lipid metabolism and immunity in dairy cows receiving essential fatty acids and conjugated linoleic acid.
PMID:35383209
Multiomic profiling of the acute stress response in the mouse hippocampus.
PMID:35383160
Genome-scale transcriptomic insights into the gene co-expression network of seed abortion in triploid Siraitia grosvenorii.
PMID:35382733
TMT-based proteomic analysis reveals integrins involved in the synergistic infection of reticuloendotheliosis virus and avian leukosis virus subgroup J.
PMID:35379256
Downregulation of KRAB zinc finger proteins in 5-fluorouracil resistant colorectal cancer cells.
PMID:35379199
Weighted gene co-expression network indicates that the DYNLL2 is an important regulator of chicken breast muscle development and is regulated by miR-148a-3p.
PMID:35379193
Transcriptome analysis of blastoderms exposed to prolonged egg storage and short periods of incubation during egg storage.
PMID:35379173
Text Mining-Based Drug Discovery for Connective Tissue Disease-Associated Pulmonary Arterial Hypertension.
PMID:35370713
Key Disease Mechanisms Linked to Amyotrophic Lateral Sclerosis in Spinal Cord Motor Neurons.
PMID:35370543
Physiological and multi-omics responses of Neoporphyra haitanensis to dehydration-rehydration cycles.
PMID:35369869
Correlation between intestinal flora disruption and protein-energy wasting in patients with end-stage renal disease.
PMID:35369865
Physiological adjustment of pomegranate pericarp responding to sunburn and its underlying molecular mechanisms.
PMID:35369864
Physiological Roles of Short-Chain and Long-Chain Menaquinones (Vitamin K2) in Lactococcus cremoris.
PMID:35369466
Identification of Potential Diagnostic Biomarkers From Circulating Cells During the Course of Sleep Deprivation-Related Myocardial Infarction Based on Bioinformatics Analyses.
PMID:35369343
A Novel Deep Learning Method to Predict Lung Cancer Long-Term Survival With Biological Knowledge Incorporated Gene Expression Images and Clinical Data.
PMID:35368657
Characterization of polyhydroxyalkanoate production capacity, composition and weight synthesized by Burkholderia cepacia JC-1 from various carbon sources.
PMID:35368536
Identification of potential pathways and microRNA-mRNA networks associated with benzene metabolite hydroquinone-induced hematotoxicity in human leukemia K562 cells.
PMID:35366954
Based on multiple machine learning to identify the ENO2 as diagnosis biomarkers of glaucoma.
PMID:35366826
Predict the role of lncRNA in kidney aging based on RNA sequencing.
PMID:35366793
A high-quality assembled genome and its comparative analysis decode the adaptive molecular mechanism of the number one Chinese cotton variety CRI-12.
PMID:35365835
Microbial metabolites in the marine carbon cycle.
PMID:35365785
A multi-omics approach to elucidate the mechanisms of action of a dietary muramidase administered to broiler chickens.
PMID:35365750
Metabolomics approach to assess the effect of siphonal autotomy on metabolic characteristics of razor clam Solen grandis.
PMID:35365742
Molecular mechanisms of Huanglian jiedu decoction on ulcerative colitis based on network pharmacology and molecular docking.
PMID:35365737
Metabonomics analysis of flavonoids in seeds and sprouts of two Chinese soybean cultivars.
PMID:35365712
Compositions of gut microbiota before and shortly after hepatitis C viral eradication by direct antiviral agents.
PMID:35361930
Black pepper and tarragon essential oils suppress the lipolytic potential and the type II secretion system of P. psychrophila KM02.
PMID:35361821
Widely targeted analysis of metabolomic changes of Cucumis sativus induced by cucurbit chlorotic yellows virus.
PMID:35361125
Computational analyses of mechanism of action (MoA): data, methods and integration.
PMID:35360890
Identification of Pathologic and Prognostic Genes in Prostate Cancer Based on Database Mining.
PMID:35360870
Protective Mechanism of Leucine and Isoleucine against H2O2-Induced Oxidative Damage in Bovine Mammary Epithelial Cells.
PMID:35360198
Distinct N and C Cross-Feeding Networks in a Synthetic Mouse Gut Consortium.
PMID:35357218
Functional and Biochemical Characterization of the MazEF6 Toxin-Antitoxin System of Mycobacterium tuberculosis.
PMID:35357163
Mass Spectrometric Behavior and Molecular Mechanisms of Fermented Deoxyanthocyanidins to Alleviate Ulcerative Colitis Based on Network Pharmacology.
PMID:35356765
Comparative transcriptome analysis reveals significant differences in gene expression between pathogens of apple Glomerella leaf spot and apple bitter rot.
PMID:35354401
Microbial communities of Auka hydrothermal sediments shed light on vent biogeography and the evolutionary history of thermophily.
PMID:35352015
Network Crosstalk as a Basis for Drug Repurposing.
PMID:35350247
DAMPs/PAMPs induce monocytic TLR activation and tolerance in COVID-19 patients; nucleic acid binding scavengers can counteract such TLR agonists.
PMID:35349874
Evaluation of Early Biomarkers of Atherosclerosis Associated with Polychlorinated Biphenyl Exposure: An in Vitro and in Vivo Study.
PMID:35349355
COVID-19: impact on Public Health and hypothesis-driven investigations on genetic susceptibility and severity.
PMID:35348847
Hallmarks of aging-based dual-purpose disease and age-associated targets predicted using PandaOmics AI-powered discovery engine.
PMID:35347083
Prognostic significance of SNCA and its methylation in bladder cancer.
PMID:35346107
Bioinformatics analysis of potential therapeutic targets for COVID-19 infection in patients with carotid atherosclerosis.
PMID:35344771
Bioinformatics Analysis of Differential Gene and MicroRNA Expression in Lung Adenocarcinoma: Genetic Effects on Patient Prognosis, as Indicated by the TCGA Database.
PMID:35342284
Transcriptomic analysis of methyl jasmonate treatment reveals gene networks involved in drought tolerance in pearl millet.
PMID:35338214
MicroRNA-mediated post-transcriptional regulation of Pinus pinaster response and resistance to pinewood nematode.
PMID:35338210
Effects of varicocele and microsurgical varicocelectomy on the metabolites in semen.
PMID:35338186
Temporal dynamics from phosphoproteomics using endoscopic biopsy specimens provides new therapeutic targets in stage IV gastric cancer.
PMID:35338158
Metabolomic strategies and biochemical analysis of the effect of processed Rehmanniae radix extract on a blood-deficient rat model.
PMID:35337319
Pharmacometabolomics Applied to Personalized Medicine in Urological Cancers.
PMID:35337093
Transcriptome and Small RNA Profiling of Potato Virus Y Infected Potato Cultivars, Including Systemically Infected Russet Burbank.
PMID:35336930
GXP: Analyze and Plot Plant Omics Data in Web Browsers.
PMID:35336631
The Macronutrient Composition of Infant Formula Produces Differences in Gut Microbiota Maturation That Associate with Weight Gain Velocity and Weight Status.
PMID:35334900
Down-regulation of the bacterial protein biosynthesis machinery in response to weeks, years, and decades of soil warming.
PMID:35333567
Transcriptome profiling of cashew apples (Anacardium occidentale) genotypes reveals specific genes linked to firmness and color during pseudofruit development.
PMID:35332428
Stripenn detects architectural stripes from chromatin conformation data using computer vision.
PMID:35332165
Adrenal tropism of SARS-CoV-2 and adrenal findings in a post-mortem case series of patients with severe fatal COVID-19.
PMID:35332140
Comprehensive analysis of tumor immune microenvironment and prognosis of m6A-related lncRNAs in gastric cancer.
PMID:35331183
Microbe-Immune Crosstalk: Evidence That T Cells Influence the Development of the Brain Metabolome.
PMID:35328680
Using Transcriptome Analysis to Explore Gray Mold Resistance-Related Genes in Onion (Alliumcepa L.).
PMID:35328095
Identification of Key Modules and Genes Associated with Major Depressive Disorder in Adolescents.
PMID:35328018
Characterization of a Read-through Fusion Transcript, BCL2L2-PABPN1, Involved in Porcine Adipogenesis.
PMID:35327999
Potential Anti-Inflammatory Effects of a New Lyophilized Formulation of the Conditioned Medium Derived from Periodontal Ligament Stem Cells.
PMID:35327485
Distinct and Common Features of Numerical and Structural Chromosomal Instability across Different Cancer Types.
PMID:35326573
Landscape of mobile genetic elements and their antibiotic resistance cargo in prokaryotic genomes.
PMID:35323968
Metabolic Footprinting of Microbial Systems Based on Comprehensive In Silico Predictions of MS/MS Relevant Data.
PMID:35323700
Microbial Interactions in Kombucha through the Lens of Metabolomics.
PMID:35323678
Screening of Carbofuran-Degrading Bacteria Chryseobacterium sp. BSC2-3 and Unveiling the Change in Metabolome during Carbofuran Degradation.
PMID:35323662
Microwave radiation induces neuronal autophagy through miR-30a-5p/AMPKα2 signal pathway.
PMID:35322852
The comparisons of expression pattern reveal molecular regulation of fruit metabolites in S. nigrum and S. lycopersicum.
PMID:35322121
Identification of potentially functional circular RNAs hsa_circ_0070934 and hsa_circ_0004315 as prognostic factors of hepatocellular carcinoma by integrated bioinformatics analysis.
PMID:35322101
Expanding biochemical knowledge and illuminating metabolic dark matter with ATLASx.
PMID:35322036
Comparative transcriptome analysis of heat stress responses of Clematis lanuginosa and Clematis crassifolia.
PMID:35321648
Identifying large-scale interaction atlases using probabilistic graphs and external knowledge.
PMID:35321220
Prognostic and biological role of the N-Myc downstream-regulated gene family in hepatocellular carcinoma.
PMID:35321174
Analysis of Gene Expression Profiles in the Liver of Rats With Intrauterine Growth Retardation.
PMID:35321016
Identification and Characterization of the Roles of circCASP9 in Gastric Cancer Based on a circRNA-miRNA-mRNA Regulatory Network.
PMID:35320976
COMMIT: Consideration of metabolite leakage and community composition improves microbial community reconstructions.
PMID:35320266
Integrative interactomics applied to bovine fescue toxicosis.
PMID:35318361
Massively parallel reporter perturbation assays uncover temporal regulatory architecture during neural differentiation.
PMID:35315433
The proteomic characterization of the peritumor microenvironment in human hepatocellular carcinoma.
PMID:35314790
Identification of co-expression hub genes for ferroptosis in kidney renal clear cell carcinoma based on weighted gene co-expression network analysis and The Cancer Genome Atlas clinical data.
PMID:35314744
Transposon insertional mutagenesis of diverse yeast strains suggests coordinated gene essentiality polymorphisms.
PMID:35314699
scINSIGHT for interpreting single-cell gene expression from biologically heterogeneous data.
PMID:35313930
Comparison of tumor and two types of paratumoral tissues highlighted epigenetic regulation of transcription during field cancerization in non-small cell lung cancer.
PMID:35313869
Systematic analysis of the expression and prognostic value of ITPR1 and correlation with tumor infiltrating immune cells in breast cancer.
PMID:35313846
Surgical Treatment for Colorectal Cancer Partially Restores Gut Microbiome and Metabolome Traits.
PMID:35311577
Target-Dependent Coordinated Biogenesis of Secondary MicroRNAs by miR-146a Balances Macrophage Activation Processes.
PMID:35311564
Temporally Selective Modification of the Tomato Rhizosphere and Root Microbiome by Volcanic Ash Fertilizer Containing Micronutrients.
PMID:35311513
Increasing the diversity of dietary fibers in a daily-consumed bread modifies gut microbiota and metabolic profile in subjects at cardiometabolic risk.
PMID:35311446
CAF-Associated Paracrine Signaling Worsens Outcome and Potentially Contributes to Chemoresistance in Epithelial Ovarian Cancer.
PMID:35311102
Integrated Metabolome and Transcriptome Analyses Reveal Dissimilarities in the Anthocyanin Synthesis Pathway Between Different Developmental Leaf Color Transitions in Hopea hainanensis (Dipterocarpaceae).
PMID:35310646
Identification of key microorganisms in facultative stabilization ponds from dairy industries, using metagenomics.
PMID:35310160
Identification of Potential Ferroptosis-Related Biomarkers and Immune Infiltration in Human Coronary Artery Atherosclerosis.
PMID:35308568
Perfluoroalkyl substances influence DNA methylation in school-age children highly exposed through drinking water contaminated from firefighting foam: a cohort study in Ronneby, Sweden.
PMID:35308102
Beta-blocker/ACE inhibitor therapy differentially impacts the steady state signaling landscape of failing and non-failing hearts.
PMID:35306519
Ferroptosis-related gene SLC1A5 is a novel prognostic biomarker and correlates with immune infiltrates in stomach adenocarcinoma.
PMID:35305616
Heat Shock Procedure Affects Cell Division-Associated Genes in Gynogenetic Manipulation.
PMID:35305189
Identification of hub genes and transcription factors in patients with rheumatoid arthritis complicated with atherosclerosis.
PMID:35304503
Bioinformatical analysis of the key differentially expressed genes and associations with immune cell infiltration in development of endometriosis.
PMID:35303800
Antifungals influence the immune-related transcriptomic landscape of human monocytes after Aspergillus fumigatus infection.
PMID:35301416
Integrative analysis identifies key genes related to metastasis and a robust gene-based prognostic signature in uveal melanoma.
PMID:35300699
Species composition and overall diversity are significantly correlated between the tongue coating and gastric fluid microbiomes in gastritis patients.
PMID:35300688
Metatranscriptomic Analyses Unravel Dynamic Changes in the Microbial and Metabolic Transcriptional Profiles in Artisanal Austrian Hard-Cheeses During Ripening.
PMID:35300479
An Oxidative Stress-Related Genes Signature for Predicting Survival in Bladder Cancer: Based on TCGA Database and Bioinformatics.
PMID:35300137
Identification of Down-Regulated ADH1C is Associated With Poor Prognosis in Colorectal Cancer Using Bioinformatics Analysis.
PMID:35300114
Healthcare-associated infections caused by chlorhexidine-tolerant Serratia marcescens carrying a promiscuous IncHI2 multi-drug resistance plasmid in a veterinary hospital.
PMID:35298517
Integrative analysis reveals the functional implications and clinical relevance of pyroptosis in low-grade glioma.
PMID:35296768
Decoding the Role of Astrocytes in the Entorhinal Cortex in Alzheimer's Disease Using High-Dimensional Single-Nucleus RNA Sequencing Data and Next-Generation Knowledge Discovery Methodologies: Focus on Drugs and Natural Product Remedies for Dementia.
PMID:35295737
Identification of hub genes and pathways in bladder cancer using bioinformatics analysis.
PMID:35291419
Prediction of response and adverse drug reaction of pemetrexed plus platinum-based chemotherapy in lung adenocarcinoma by serum metabolomic profiling.
PMID:35290920
Gut microbiome correlates of response and toxicity following anti-CD19 CAR T cell therapy.
PMID:35288695
Characterization of the WRKY gene family in Akebia trifoliata and their response to Colletotrichum acutatum.
PMID:35287589
Cold stress tolerance of the intertidal red alga Neoporphyra haitanensis.
PMID:35287582
Comparative transcriptome analysis reveals immunoregulation mechanism of lncRNA-mRNA in gill and skin of large yellow croaker (Larimichthys crocea) in response to Cryptocaryon irritans infection.
PMID:35287569
Distinct metabolic profiling is correlated with bisexual flowers formation resulting from exogenous ethephon induction in melon (Cucumis melo L.).
PMID:35287348
Transcriptomic Analysis Revealed Reactive Oxygen Species Scavenging Mechanisms Associated With Ferrous Iron Toxicity in Aromatic Keteki Joha Rice.
PMID:35283928
Genome Analysis of the Broad Host Range Necrotroph Nalanthamala psidii Highlights Genes Associated With Virulence.
PMID:35283890
Microbial Community and Metabolite Dynamics During Soy Sauce Koji Making.
PMID:35283863
Salicylic Acid-Mediated Disturbance Increases Bacterial Diversity in the Phyllosphere but Is Overcome by a Dominant Core Community.
PMID:35283825
Soil Properties Interacting With Microbial Metagenome in Decreasing CH4 Emission From Seasonally Flooded Marshland Following Different Stages of Afforestation.
PMID:35283824
The Key Genes Underlying Pathophysiology Correlation Between the Acute Myocardial Infarction and COVID-19.
PMID:35282650
Cold Exposure Induces Depot-Specific Alterations in Fatty Acid Composition and Transcriptional Profile in Adipose Tissues of Pigs.
PMID:35282453
Identifying Environmental Endocrine Disruptors Associated With the Age at Menarche by Integrating a Transcriptome-Wide Association Study With Chemical-Gene-Interaction Analysis.
PMID:35282430
CerealESTDb: A Comprehensive Resource for Abiotic Stress-Responsive Annotated ESTs With Predicted Genes, Gene Ontology, and Metabolic Pathways in Major Cereal Crops.
PMID:35281847
Network Analysis Reveals Different Cellulose Degradation Strategies Across Trichoderma harzianum Strains Associated With XYR1 and CRE1.
PMID:35281818
Solasonine Induces Apoptosis and Inhibits Proliferation of Bladder Cancer Cells by Suppressing NRP1 Expression.
PMID:35281516
Insights Into the Impact of Small RNA SprC on the Metabolism and Virulence of Staphylococcus aureus.
PMID:35281456
Gut microbial composition in developmental stages of gall inducing thrips Gynaikothrips uzeli and associated plant pathogenesis.
PMID:35280592
HCK is a Potential Prognostic Biomarker that Correlates with Immune Cell Infiltration in Acute Myeloid Leukemia.
PMID:35280440
Identification of differentially expressed and methylated genes and construction of a co-expression network in age-related macular degeneration.
PMID:35280389
Structure and activity of the DHNA Coenzyme-A Thioesterase from Staphylococcus aureus providing insights for innovative drug development.
PMID:35279696
The expanded inhibitor of apoptosis gene family in oysters possesses novel domain architectures and may play diverse roles in apoptosis following immune challenge.
PMID:35279090
Nicotinamide (niacin) supplement increases lipid metabolism and ROS-induced energy disruption in triple-negative breast cancer: potential for drug repositioning as an anti-tumor agent.
PMID:35278276
Chromosome-level genome assembly, annotation, and phylogenomics of the gooseneck barnacle Pollicipes pollicipes.
PMID:35277961
Novel alleles gained during the Beringian isolation period.
PMID:35277570
Computational identification of host genomic biomarkers highlighting their functions, pathways and regulators that influence SARS-CoV-2 infections and drug repurposing.
PMID:35277538
The vaccine-site microenvironment: impacts of antigen, adjuvant, and same-site vaccination on antigen presentation and immune signaling.
PMID:35277457
Maize plant architecture trait QTL mapping and candidate gene identification based on multiple environments and double populations.
PMID:35277127
Hydrolyzed Proteins and Vegetable Peptides: Anti-Inflammatory Mechanisms in Obesity and Potential Therapeutic Targets.
PMID:35277049
Embryonic Exposure to Tryptophan Yields Bullying Victimization via Reprogramming the Microbiota-Gut-Brain Axis in a Chicken Model.
PMID:35277020
Different Alterations in Gut Microbiota between Bifidobacterium longum and Fecal Microbiota Transplantation Treatments in Propionic Acid Rat Model of Autism.
PMID:35276971
A genome-scale gain-of-function CRISPR screen in CD8 T cells identifies proline metabolism as a means to enhance CAR-T therapy.
PMID:35276062
Integrated analysis of differentially expressed genes and a ceRNA network to identify hub lncRNAs and potential drugs for multiple sclerosis.
PMID:35273684
Integrative Analyses of Genes Associated With Otologic Disorders in Turner Syndrome.
PMID:35273637
Metabolomic Impact of Lidocaine on a Triple Negative Breast Cancer Cell Line.
PMID:35273500
Exposure to Trypanosoma parasites induces changes in the microbiome of the Chagas disease vector Rhodnius prolixus.
PMID:35272716
Uncovering the Gene Regulatory Network of Maize Hybrid ZD309 under Heat Stress by Transcriptomic and Metabolomic Analysis.
PMID:35270147
Transcriptome Profiling and Functional Validation of RING-Type E3 Ligases in Halophyte Sesuvium verrucosum under Salinity Stress.
PMID:35269961
Coenzyme A Restriction as a Factor Underlying Pre-Eclampsia with Polycystic Ovary Syndrome as a Risk Factor.
PMID:35269927
Better Agreement of Human Transcriptomic and Proteomic Cancer Expression Data at the Molecular Pathway Activation Level.
PMID:35269755
Combined Transcriptomic and Proteomic Profiling of E. coli under Microaerobic versus Aerobic Conditions: The Multifaceted Roles of Noncoding Small RNAs and Oxygen-Dependent Sensing in Global Gene Expression Control.
PMID:35269716
Imbalances in TCA, Short Fatty Acids and One-Carbon Metabolisms as Important Features of Homeostatic Disruption Evidenced by a Multi-Omics Integrative Approach of LPS-Induced Chronic Inflammation in Male Wistar Rats.
PMID:35269702
Transcriptomics of Parental Care in the Hypothalamic-Septal Region of Female Zebra Finch Brain.
PMID:35269661
Integrated Metabolomics and Lipidomics Reveal High Accumulation of Glycerophospholipids in Human Astrocytes under the Lipotoxic Effect of Palmitic Acid and Tibolone Protection.
PMID:35269616
Comprehensive Analysis of the Effect of 20(R)-Ginsenoside Rg3 on Stroke Recovery in Rats via the Integrative miRNA-mRNA Regulatory Network.
PMID:35268674
Widely-Targeted Metabolic Profiling in Lyciumbarbarum Fruits under Salt-Alkaline Stress Uncovers Mechanism of Salinity Tolerance.
PMID:35268665
Is Genetic Engineering a Route to Enhance Microalgae-Mediated Bioremediation of Heavy Metal-Containing Effluents?
PMID:35268582
A Computational Text Mining-Guided Meta-Analysis Approach to Identify Potential Xerostomia Drug Targets.
PMID:35268532
Comparative analysis of the daily brain transcriptomes of Asian particolored bat.
PMID:35264653
Quantitative proteomic analysis of the lysine acetylome reveals diverse SIRT2 substrates.
PMID:35264593
Comparative whole transcriptome analysis of Parkinson's disease focusing on the efficacy of zonisamide.
PMID:35264450
Transcriptomic profiling of the telomerase transformed Mesenchymal stromal cells derived adipocytes in response to rosiglitazone.
PMID:35264099
Whole genome sequence of pan drug-resistant clinical isolate of Acinetobacter baumannii ST1890.
PMID:35263355
Urgent need for consistent standards in functional enrichment analysis.
PMID:35263338
RNA-seq and integrated network analysis reveals the hub genes and key pathway of paclitaxel inhibition on Adriamycin resistant diffuse large B cell lymphoma cells.
PMID:35263200
Gut microbiota and the prevalence and incidence of renal stones.
PMID:35260689
MicroRNome analysis generates a blood-based signature for endometriosis.
PMID:35260677
Investigation of bacterial diversity using 16S rRNA sequencing and prediction of its functionalities in Moroccan phosphate mine ecosystem.
PMID:35260670
Computing microRNA-gene interaction networks in pan-cancer using miRDriver.
PMID:35260634
Metagenomics reveals differences in microbial composition and metabolic functions in the rumen of dairy cows with different residual feed intake.
PMID:35260198
Comprehensive characterization of m6A methylation and its impact on prognosis, genome instability, and tumor microenvironment in hepatocellular carcinoma.
PMID:35260168
Integrative Genome-Scale Metabolic Modeling Reveals Versatile Metabolic Strategies for Methane Utilization in Methylomicrobium album BG8.
PMID:35258342
Changes in the liver transcriptome and physiological parameters of Japanese Black steers during the fattening period.
PMID:35256743
Patients with low muscle mass have characteristic microbiome with low potential for amino acid synthesis in chronic liver disease.
PMID:35256716
Shared genetic loci for body fat storage and adipocyte lipolysis in humans.
PMID:35256633
The fiber diameter traits of Tibetan cashmere goats are governed by the inherent differences in stress, hypoxic, and metabolic adaptations: an integrative study of proteome and transcriptome.
PMID:35255833
Determining extracellular vesicles properties and miRNA cargo variability in bovine milk from healthy cows and cows undergoing subclinical mastitis.
PMID:35255807
Whole-genome sequencing reveals host factors underlying critical COVID-19.
PMID:35255492
A network-based computational and experimental framework for repurposing compounds toward the treatment of non-alcoholic fatty liver disease.
PMID:35252807
Identification and Comprehensive Analysis of FREM2 Mutation as a Potential Prognostic Biomarker in Colorectal Cancer.
PMID:35252356
Changes of Intestinal Microflora in Colorectal Cancer Patients after Surgical Resection and Chemotherapy.
PMID:35251295
Early Brain microRNA/mRNA Expression is Region-Specific After Neonatal Hypoxic-Ischemic Injury in a Mouse Model.
PMID:35251138
A High-Quality, Chromosome-Level Genome Provides Insights Into Determinate Flowering Time and Color of Cotton Rose (Hibiscus mutabilis).
PMID:35251086
Reconstruction and analysis of a large-scale binary Ras-effector signaling network.
PMID:35246154
Predicting biochemical-recurrence-free survival using a three-metabolic-gene risk score model in prostate cancer patients.
PMID:35246070
Co‑expressed microRNAs, target genes and pathways related to metabolism, inflammation and endocrine function in individuals at risk for type 2 diabetes.
PMID:35244194
Ligand-mediated PAI-1 inhibition in a mouse model of peritoneal carcinomatosis.
PMID:35243423
Tertiary lymphoid structure and decreased CD8+ T cell infiltration in minimally invasive adenocarcinoma.
PMID:35243243
The Role of Intestinal Microbiota in Regulating the Metabolism of Bile Acids Is Conserved Across Vertebrates.
PMID:35242120
Altered Expression of Specific MicroRNAs in Plasma of Aneurysmal Subarachnoid Hemorrhage Patients.
PMID:35242102
Network pharmacology-based predictions of active components and pharmacological mechanisms of Artemisia annua L. for the treatment of the novel Corona virus disease 2019 (COVID-19).
PMID:35241045
Prognostic value and immune relevancy of a combined autophagy-, apoptosis- and necrosis-related gene signature in glioblastoma.
PMID:35241019
Identification of DDX31 as a Potential Oncogene of Invasive Metastasis and Proliferation in PDAC.
PMID:35237592
Identifying Potential Mitochondrial Proteome Signatures Associated with the Pathogenesis of Pulmonary Arterial Hypertension in the Rat Model.
PMID:35237384
Prognostication of Pancreatic Cancer Using The Cancer Genome Atlas Based Ferroptosis-Related Long Non-Coding RNAs.
PMID:35237306
Microbiome and metabolome profiles of high screen time in a cohort of healthy college students.
PMID:35236903
Combination of ferroptosis and pyroptosis to construct a prognostic classifier and predict immune landscape, chemotherapeutic efficacy and immunosuppressive molecules in hepatocellular carcinoma.
PMID:35236323
Comprehensive analysis of the autophagy-dependent ferroptosis-related gene FANCD2 in lung adenocarcinoma.
PMID:35236309
Discovery and characterization of differentially expressed soybean miRNAs and their targets during soybean mosaic virus infection unveils novel insight into Soybean-SMV interaction.
PMID:35236286
Transcriptome sequencing and lncRNA-miRNA-mRNA network construction in cardiac fibrosis and heart failure.
PMID:35235759
Multi-omic rejuvenation of naturally aged tissues by a single cycle of transient reprogramming.
PMID:35235716
Summarizing internal dynamics boosts differential analysis and functional interpretation of super enhancers.
PMID:35234924
Differential expression analyses reveal extensive transcriptional plasticity induced by temperature in New Zealand silver trevally (Pseudocaranx georgianus).
PMID:35233245
Sow vaccination against virulent Glaesserella parasuis shapes the nasal microbiota of their offspring.
PMID:35233006
Preterm birth buccal cell epigenetic biomarkers to facilitate preventative medicine.
PMID:35232984
Comprehensive analysis of ferroptosis-related genes and prognosis of cutaneous melanoma.
PMID:35232428
Network Approaches for Precision Oncology.
PMID:35230690
Pathway Analysis for Cancer Research and Precision Oncology Applications.
PMID:35230687
Microbial Consortiums of Putative Degraders of Low-Density Polyethylene-Associated Compounds in the Ocean.
PMID:35229650
Global profiling of phosphorylation-dependent changes in cysteine reactivity.
PMID:35228727
Neuronal-glial communication perturbations in murine SOD1G93A spinal cord.
PMID:35228715
GAIT-GM integrative cross-omics analyses reveal cholinergic defects in a C. elegans model of Parkinson's disease.
PMID:35228596
Full-length transcriptome analysis of multiple organs and identification of adaptive genes and pathways in Mikania micrantha.
PMID:35228580
Comparative systeomics to elucidate physiological differences between CHO and SP2/0 cell lines.
PMID:35228567
Short-term physiologic response of the green microalga Picochlorum sp. (BPE23) to supra-optimal temperature.
PMID:35228560
Screening the components of Saussurea involucrata for novel targets for the treatment of NSCLC using network pharmacology.
PMID:35227278
DLRAPom: a hybrid pipeline of Optimized XGBoost-guided integrative multiomics analysis for identifying targetable disease-related lncRNA-miRNA-mRNA regulatory axes.
PMID:35224615
Comparative transcriptomes of three different skin sites for the Asiatic toad (Bufo gargarizans).
PMID:35223212
Construction and Verification of a Combined Hypoxia and Immune Index for Clear Cell Renal Cell Carcinoma.
PMID:35222525
Weighted Co-Expression Network Analysis Identifies RNF181 as a Causal Gene of Coronary Artery Disease.
PMID:35222523
Metabolomic Profiling Reveals That 5-Hydroxylysine and 1-Methylnicotinamide Are Metabolic Indicators of Keloid Severity.
PMID:35222522
Physio-Morphological, Biochemical and Transcriptomic Analyses Provide Insights Into Drought Stress Responses in Mesona chinensis Benth.
PMID:35222473
Exploration of Diverse Secondary Metabolites From Streptomyces sp. YINM00001, Using Genome Mining and One Strain Many Compounds Approach.
PMID:35222341
Multi-Omics Profiling Specifies Involvement of Alternative Ribosomal Proteins in Response to Zinc Limitation in Mycobacterium smegmatis.
PMID:35222334
Metagenomic Analysis Reveals a Changing Microbiome Associated With the Depth of Invasion of Oral Squamous Cell Carcinoma.
PMID:35222330
Comparative Metabolic Pathways Analysis and Subtractive Genomics Profiling to Prioritize Potential Drug Targets Against Streptococcus pneumoniae.
PMID:35222301
Duchenne muscular dystrophy gene expression is an independent prognostic marker for IDH mutant low-grade glioma.
PMID:35217778
The transcriptomic responses of blunt snout bream (Megalobrama amblycephala) to acute hypoxia stress alone, and in combination with bortezomib.
PMID:35216548
Unlike Chloroquine, Mefloquine Inhibits SARS-CoV-2 Infection in Physiologically Relevant Cells.
PMID:35215969
The Anticancer Ruthenium Compound BOLD-100 Targets Glycolysis and Generates a Metabolic Vulnerability towards Glucose Deprivation.
PMID:35213972
Identification of a new RNA-binding proteins-based signature for prognostic prediction in gastric cancer.
PMID:35212295
HOXB4 Mis-Regulation Induced by Microcystin-LR and Correlated With Immune Infiltration Is Unfavorable to Colorectal Cancer Prognosis.
PMID:35211403
Virulence Biomarkers of Bursaphelenchus xylophilus: A Proteomic Approach.
PMID:35211137
Fermentation Profiles, Bacterial Community Compositions, and Their Predicted Functional Characteristics of Grass Silage in Response to Epiphytic Microbiota on Legume Forages.
PMID:35211107
MicroRNA editing patterns in Huntington's disease.
PMID:35210471
Complete genome sequence of biocontrol strain Paenibacillus peoriae HJ-2 and further analysis of its biocontrol mechanism.
PMID:35209846
Assessment of Hydrocarbon Degradation Potential in Microbial Communities in Arctic Sea Ice.
PMID:35208784
Application of Whole Exome Sequencing and Functional Annotations to Identify Genetic Variants Associated with Marfan Syndrome.
PMID:35207686
SmileGNN: Drug-Drug Interaction Prediction Based on the SMILES and Graph Neural Network.
PMID:35207606
Transcriptomics-Based Identification of Genes Related to Tapetum Degradation and Microspore Development in Lily.
PMID:35205410
Genome-Wide Association Study Reveals Genetic Architecture and Candidate Genes for Yield and Related Traits under Terminal Drought, Combined Heat and Drought in Tropical Maize Germplasm.
PMID:35205393
Genomic Analyses of the Fungus Paraconiothyrium sp. Isolated from the Chinese White Wax Scale Insect Reveals Its Symbiotic Character.
PMID:35205383
Whole Genome DNA Methylation Profiling of D2 Medium Spiny Neurons in Mouse Nucleus Accumbens Using Two Independent Library Preparation Methods.
PMID:35205351
A Genome-Scale Metabolic Model for the Human Pathogen Candida Parapsilosis and Early Identification of Putative Novel Antifungal Drug Targets.
PMID:35205348
miRNome Profiling Detects miR-101-3p and miR-142-5p as Putative Blood Biomarkers of Frailty Syndrome.
PMID:35205276
Single-Cell Sequencing Reveals an Intrinsic Heterogeneity of the Preovulatory Follicular Microenvironment.
PMID:35204732
Benzaldehyde Attenuates the Fifth Stage Larval Excretory-Secretory Product of Angiostrongylus cantonensis-Induced Injury in Mouse Astrocytes via Regulation of Endoplasmic Reticulum Stress and Oxidative Stress.
PMID:35204678
Multi-Omics Analysis of Multiple Glucose-Sensing Receptor Systems in Yeast.
PMID:35204676
Integrative Identification of Genetic Loci Jointly Influencing Diabetes-Related Traits and Sleep Traits of Insomnia, Sleep Duration, and Chronotypes.
PMID:35203577
Impact of Maternal Obesity on Liver Disease in the Offspring: A Comprehensive Transcriptomic Analysis and Confirmation of Results in a Murine Model.
PMID:35203502
Genes Involved in Immune Reinduction May Constitute Biomarkers of Response for Metastatic Melanoma Patients Treated with Targeted Therapy.
PMID:35203494
Overexpression of MET4 Leads to the Upregulation of Stress-Related Genes and Enhanced Sulfite Tolerance in Saccharomyces uvarum.
PMID:35203287
CobraMod: A pathway-centric curation tool for constraint-based metabolic models.
PMID:35201291
Amniotic Fluid microRNA in Severe Twin-Twin Transfusion Syndrome Cardiomyopathy-Identification of Differences and Predicting Demise.
PMID:35200691
Effect of Different Initial Fermentation pH on Exopolysaccharides Produced by Pseudoalteromonas agarivorans Hao 2018 and Identification of Key Genes Involved in Exopolysaccharide Synthesis via Transcriptome Analysis.
PMID:35200619
Identification of Potential Immune Checkpoint Inhibitor Targets in Gliomas via Bioinformatic Analyses.
PMID:35198632
Biomarker Value of miR-221 and miR-222 as Potential Substrates in the Differential Diagnosis of Papillary Thyroid Cancer Based on Data Synthesis and Bioinformatics Approach.
PMID:35197926
Identification of immune-infiltrated hub genes as potential biomarkers of Moyamoya disease by bioinformatics analysis.
PMID:35197088
tensorGSEA: Detecting Differential Pathways in Type 2 Diabetes via Tensor-Based Data Reconstruction.
PMID:35195883
A systematic review of gut microbiota composition in observational studies of major depressive disorder, bipolar disorder and schizophrenia.
PMID:35194166
Protein and miRNA profile of circulating extracellular vesicles in patients with primary sclerosing cholangitis.
PMID:35194091
Functional buffering via cell-specific gene expression promotes tissue homeostasis and cancer robustness.
PMID:35194081
Clinical implications and molecular mechanisms of Cyclin-dependent kinases 4 for patients with hepatocellular carcinoma.
PMID:35193513
Endothelial Phospholipase Cγ2 Improves Outcomes of Diabetic Ischemic Limb Rescue Following VEGF Therapy.
PMID:35192691
Using AnnoTree to Get More Assignments, Faster, in DIAMOND+MEGAN Microbiome Analysis.
PMID:35191776
Genomic characterization of the world's longest selection experiment in mouse reveals the complexity of polygenic traits.
PMID:35189878
WDR72 regulates vesicle trafficking in ameloblasts.
PMID:35181734
Identification of candidate genes that specifically regulate subcutaneous and intramuscular fat deposition using transcriptomic and proteomic profiles in Dingyuan pigs.
PMID:35181733
Regulated cell death joins in atherosclerotic plaque silent progression.
PMID:35181730
Comprehensive analysis of the expression and significance of CXCLs in human diffuse large B-cell lymphoma.
PMID:35181719
Integrated analysis of the prognostic and oncogenic roles of OPN3 in human cancers.
PMID:35180853
Rebalance of the Polyamine Metabolism Suppresses Oxidative Stress and Delays Senescence in Nucleus Pulposus Cells.
PMID:35178160
Insight Into Pituitary lncRNA and mRNA at Two Estrous Stages in Small Tail Han Sheep With Different FecB Genotypes.
PMID:35178025
Whole-transcriptome analysis and construction of an anther development-related ceRNA network in Chinese cabbage (Brassica campestris L. ssp. pekinensis).
PMID:35177672
Whole-genome analysis of human embryonic stem cells enables rational line selection based on genetic variation.
PMID:35176222
Transcriptome-wide association study of coronary artery disease identifies novel susceptibility genes.
PMID:35175464
RNA-Sequencing Analysis of the Spleen and Gill of Takifugu rubripes in Response to Vibrio harveyi Infection.
PMID:35174239
Metabolic Variation Dictates Cardiac Pathogenesis in Patients With Tetralogy of Fallot.
PMID:35174118
Effects of Antibiotic Use on Saliva Antibody Content and Oral Microbiota in Sprague Dawley Rats.
PMID:35174102
Integrating single-cell sequencing data with GWAS summary statistics reveals CD16+monocytes and memory CD8+T cells involved in severe COVID-19.
PMID:35172892
METABOLIC: high-throughput profiling of microbial genomes for functional traits, metabolism, biogeochemistry, and community-scale functional networks.
PMID:35172890
Exosomes derived from human placental mesenchymal stem cells ameliorate myocardial infarction via anti-inflammation and restoring gut dysbiosis.
PMID:35172728
Time-course RNA-seq analysis reveals stage-specific and melatonin-triggered gene expression patterns during the hair follicle growth cycle in Capra hircus.
PMID:35172715
Mechanism of action of Tripterygium wilfordii for treatment of idiopathic membranous nephropathy based on network pharmacology.
PMID:35172688
HIV-1 Tat and cocaine coexposure impacts piRNAs to affect astrocyte energy metabolism.
PMID:35170353
Transcriptome analysis of genes associated with autolysis of Coprinus comatus.
PMID:35169137
LINE-1 expression in cancer correlates with p53 mutation, copy number alteration, and S phase checkpoint.
PMID:35169076
Placental methylome reveals a 22q13.33 brain regulatory gene locus associated with autism.
PMID:35168652
Large-scale association study on daily weight gain in pigs reveals overlap of genetic factors for growth in humans.
PMID:35168569
Global pleiotropic effects in adaptively evolved Escherichia coli lacking CRP reveal molecular mechanisms that define the growth physiology.
PMID:35167766
IL-17 Receptor C Signaling Controls CD4+ TH17 Immune Responses and Tissue Injury in Immune-Mediated Kidney Diseases.
PMID:35167487
Hyaluronidase-1-mediated glycocalyx impairment underlies endothelial abnormalities in polypoidal choroidal vasculopathy.
PMID:35164755
AQP4 Attenuated TRAF6/NFκB Activation in Acrylamide-Induced Neurotoxicity.
PMID:35164330
Single-Cell Analysis Uncovers Osteoblast Factor Growth Differentiation Factor 10 as Mediator of Vascular Smooth Muscle Cell Phenotypic Modulation Associated with Plaque Rupture in Human Carotid Artery Disease.
PMID:35163719
De Novo Assembly and Annotation of the Vaginal Metatranscriptome Associated with Bacterial Vaginosis.
PMID:35163545
Transcriptomic Profile of Canine DH82 Macrophages Infected by Leishmania infantum Promastigotes with Different Virulence Behavior.
PMID:35163386
Treatment of Pheochromocytoma Cells with Recurrent Cycles of Hypoxia: A New Pseudohypoxic In Vitro Model.
PMID:35159368
Single-Cell RNA-Seq Reveals a Crosstalk between Hyaluronan Receptor LYVE-1-Expressing Macrophages and Vascular Smooth Muscle Cells.
PMID:35159221
Syntenin Regulated by miR-216b Promotes Cancer Progression in Pancreatic Cancer.
PMID:35155233
Organ-Specific Gene Expression Reveals the Role of the Cymbidium ensifolium-miR396/Growth-Regulating Factors Module in Flower Development of the Orchid Plant Cymbidium ensifolium.
PMID:35154190
Identification and Tracking of Alloreactive T Cell Clones in Rhesus Macaques Through the RM-scTCR-Seq Platform.
PMID:35154078
Genomic Insights Into Cadmium Resistance of a Newly Isolated, Plasmid-Free Cellulomonas sp. Strain Y8.
PMID:35154027
A novel 4 immune-related genes as diagnostic markers and correlated with immune infiltrates in major depressive disorder.
PMID:35152883
Gene-Interaction-Sensitive enrichment analysis in congenital heart disease.
PMID:35151364
A computational system for Bayesian benchmark dose estimation of genomic data in BBMD.
PMID:35151117
A microRNA-based liquid biopsy signature for the early detection of esophageal squamous cell carcinoma: a retrospective, prospective and multicenter study.
PMID:35148754
Forgetting generates a novel state that is reactivatable.
PMID:35148188
Uterine fluid microRNAs are dysregulated in women with recurrent implantation failure.
PMID:35147192
Chromosome-level genome assembly of Aristolochia contorta provides insights into the biosynthesis of benzylisoquinoline alkaloids and aristolochic acids.
PMID:35147168
Developmental alterations in DNA methylation during gametogenesis from primordial germ cells to sperm.
PMID:35146397
Immune Infiltration of CD8+ T Cells in Patients With Diabetic Pancreatic Cancer Reduces the Malignancy of Cancer Tissues: An In Silico Study.
PMID:35145483
ILF2 enhances the DNA cytosine deaminase activity of tumor mutator APOBEC3B in multiple myeloma cells.
PMID:35145187
Serine, N-acetylaspartate differentiate adolescents with juvenile idiopathic arthritis compared with healthy controls: a metabolomics cross-sectional study.
PMID:35144633
Micronutrient supplementation affects DNA methylation in male gonads with potential intergenerational epigenetic inheritance involving the embryonic development through glutamate receptor-associated genes.
PMID:35144563
Fitness benefits play a vital role in the retention of the Pi-ta susceptible alleles.
PMID:35143673
Second Heart Field-Derived Cells Contribute to Angiotensin II-Mediated Ascending Aortopathies.
PMID:35143327
Changes in Gut Microbiota of Patients with Atopic Dermatitis During Balneotherapy.
PMID:35140493
The induction of peripheral trained immunity in the pancreas incites anti-tumor activity to control pancreatic cancer progression.
PMID:35140221
Combined transcriptomic and metabolomic analysis reveals the potential mechanism of seed germination and young seedling growth in Tamarix hispida.
PMID:35135479
Temporal analyses of postnatal liver development and maturation by single-cell transcriptomics.
PMID:35134346
Transcriptome Analysis of Detoxification-Related Genes in Spodoptera frugiperda (Lepidoptera: Noctuidae).
PMID:35134188
Deciphering the etiology and role in oncogenic transformation of the CpG island methylator phenotype: a pan-cancer analysis.
PMID:35134107
A High-Density Genetic Map Enables Genome Synteny and QTL Mapping of Vegetative Growth and Leaf Traits in Gardenia.
PMID:35132310
Role of mitochondrial genetic interactions in determining adaptation to high altitude human population.
PMID:35132109
NamZ1 and NamZ2 from the Oral Pathogen Tannerella forsythia Are Peptidoglycan Processing Exo-β-N-Acetylmuramidases with Distinct Substrate Specificities.
PMID:35129368
β-catenin perturbations control differentiation programs in mouse embryonic stem cells.
PMID:35128356
Identification of Key Genes and Pathways Involved in Circulating Tumor Cells in Colorectal Cancer.
PMID:35127345
Carbohydrate active enzymes (CAZy) regulate cellulolytic and pectinolytic enzymes in Colletotrichum falcatum causing red rot in sugarcane.
PMID:35127303
Non-Invasive microRNA Profiling in Saliva can Serve as a Biomarker of Alcohol Exposure and Its Effects in Humans.
PMID:35126468
Identification of the Association Between Toll-Like Receptors and T-Cell Activation in Takayasu's Arteritis.
PMID:35126357
PBK/TOPK Inhibitor Suppresses the Progression of Prolactinomas.
PMID:35126305
Pedobacter aquae sp. nov., a multi-drug resistant bacterium isolated from fresh water.
PMID:35124766
Exploring the total flavones of Abelmoschus manihot against IAV-induced lung inflammation by network pharmacology.
PMID:35123452
Construction and comprehensive analysis of the competing endogenous RNA network in endometrial adenocarcinoma.
PMID:35123404
Identification and validation of an autophagy-related gene signature for predicting prognosis in patients with esophageal squamous cell carcinoma.
PMID:35121801
Ionic mitigation of CD4+ T cell metabolic fitness, Th1 central nervous system autoimmunity and Th2 asthmatic airway inflammation by therapeutic zinc.
PMID:35121767
Mechanisms of the host immune response and helminth-induced pathology during Trichobilharzia regenti (Schistosomatidae) neuroinvasion in mice.
PMID:35120185
Field cancerization profile-based prognosis signatures lead to more robust risk evaluation in hepatocellular carcinoma.
PMID:35118360
Identification of key biomarkers and potential signaling pathway associated with poor progression of gastric cancer.
PMID:35117911
Candidate genes for predicting the survival of patients with gastric cancer: a study based on The Cancer Genome Atlas (TCGA) database.
PMID:35117619
Comprehensive analysis reveals a four-gene signature in colorectal cancer.
PMID:35117487
Screening of potential genes and transcription factors involved in post-radiation cognitive dysfunction in mice via bioinformatics.
PMID:35117246
Integrated bioinformatics analysis to identify key genes related to the prognosis of esophageal squamous cell carcinoma.
PMID:35116493
Transcriptome analysis of the effect of a novel human serine protease inhibitor SPINK13 on gene expression in MHCC97-H cells.
PMID:35116303
ZERO-INFLATED QUANTILE RANK-SCORE BASED TEST (ZIQRANK) WITH APPLICATION TO SCRNA-SEQ DIFFERENTIAL GENE EXPRESSION ANALYSIS.
PMID:35116085
RNA-Seq Transcriptome Analysis Provides Candidate Genes for Resistance to Tomato Leaf Curl New Delhi Virus in Melon.
PMID:35116050
Identification of Inflammation-Related Biomarker Pro-ADM for Male Patients With Gout by Comprehensive Analysis.
PMID:35116032
Integrated physiological, proteomic, and metabolomic analyses of pecan cultivar 'Pawnee' adaptation to salt stress.
PMID:35115595
Single cell RNA sequencing reveals differentiation related genes with drawing implications in predicting prognosis and immunotherapy response in gliomas.
PMID:35115572
Mitochondrial protein import determines lifespan through metabolic reprogramming and de novo serine biosynthesis.
PMID:35115503
Probabilistic Graphical Models Applied to Biological Networks.
PMID:35113399
Screening of Important Markers in Peripheral Blood Mononuclear Cells to Predict Female Osteoporosis Risk Using LASSO Regression Algorithm and SVM Method.
PMID:35110962
Metagenomic analysis of microbial community structure and function in a improved biofilter with odorous gases.
PMID:35110663
m6A-related lncRNAs predict prognosis and indicate immune microenvironment in acute myeloid leukemia.
PMID:35110624
Morphological and molecular features of early regeneration in the marine annelid Ophryotrocha xiamen.
PMID:35110576
RNA-seq of nine canine prostate cancer cell lines reveals diverse therapeutic target signatures.
PMID:35109825
DDX10 promotes the proliferation and metastasis of colorectal cancer cells via splicing RPL35.
PMID:35109823
Simultaneous Single-Cell Genome and Transcriptome Sequencing of Termite Hindgut Protists Reveals Metabolic and Evolutionary Traits of Their Endosymbionts.
PMID:35107338
Amphioxus muscle transcriptomes reveal vertebrate-like myoblast fusion genes and a highly conserved role of insulin signalling in the metabolism of muscle.
PMID:35105312
Intergenerational effects of preconception opioids on glucose homeostasis and hepatic transcription in adult male rats.
PMID:35102183
Five hypoxia and immunity related genes as potential biomarkers for the prognosis of osteosarcoma.
PMID:35102149
De novo and comparative transcriptomic analysis explain morphological differences in Panax notoginseng taproots.
PMID:35100996
Expression profiles and functions of ferroptosis-related genes in the placental tissue samples of early- and late-onset preeclampsia patients.
PMID:35100981
Endothelial Cell RNA-Seq Data: Differential Expression and Functional Enrichment Analyses to Study Phenotypic Switching.
PMID:35099752
Effects of Chronic Arginase Inhibition with Norvaline on Tau Pathology and Brain Glucose Metabolism in Alzheimer's Disease Mice.
PMID:35098420
Circular Network of Coregulated Sphingolipids Dictates Chronic Hypoxia Damage in Patients With Tetralogy of Fallot.
PMID:35097000
Identification of Diagnostic Markers for Breast Cancer Based on Differential Gene Expression and Pathway Network.
PMID:35096840
UCP1 Knockin Induces Lipid Dynamics and Transcriptional Programs in the Skeletal Muscles of Pigs.
PMID:35096834
Mycobacterium leprae Transcriptome During In Vivo Growth and Ex Vivo Stationary Phases.
PMID:35096659
The FUT2 Variant c.461G>A (p.Trp154*) Is Associated With Differentially Expressed Genes and Nasopharyngeal Microbiota Shifts in Patients With Otitis Media.
PMID:35096646
Single-Cell Ribonucleic Acid Sequencing Clarifies Cold Tolerance Mechanisms in the Pacific White Shrimp (Litopenaeus Vannamei).
PMID:35096009
Gene Expression in Embryos From Norwegian Red Bulls With High or Low Non Return Rate: An RNA-Seq Study of in vivo-Produced Single Embryos.
PMID:35096004
Knowledge-Driven Approaches to Create the MTox700+ Metabolite Panel for Predicting Toxicity.
PMID:35094093
Single-cell transcriptomic analysis reveals a novel cell state and switching genes during hepatic stellate cell activation in vitro.
PMID:35093101
Metabolome analysis of key genes for synthesis and accumulation of triterpenoids in Wolfiporia cocos.
PMID:35091582
Co-expression of cancer stem cell markers, SALL4/ALDH1A1, is associated with tumor aggressiveness and poor survival in patients with serous ovarian carcinoma.
PMID:35090523
Multi-omic landscaping of human midbrains identifies disease-relevant molecular targets and pathways in advanced-stage Parkinson's disease.
PMID:35090094
Transcriptomic Insight into Underground Floral Differentiation in Erythronium japonicum.
PMID:35087909
GAL08, an Uncultivated Group of Acidobacteria, Is a Dominant Bacterial Clade in a Neutral Hot Spring.
PMID:35087491
Impact of high platelet turnover on the platelet transcriptome: Results from platelet RNA-sequencing in patients with sepsis.
PMID:35085240
A novel pyroptosis-related signature predicts prognosis and response to treatment in breast carcinoma.
PMID:35085103
Wounding response in Porifera (sponges) activates ancestral signaling cascades involved in animal healing, regeneration, and cancer.
PMID:35079031
Bioinformatics screening the novel and promising targets of curcumin in hepatocellular carcinoma chemotherapy and prognosis.
PMID:35078445
The role of SPI1-TYROBP-FCER1G network in oncogenesis and prognosis of osteosarcoma, and its association with immune infiltration.
PMID:35078433
Fungal and ciliate protozoa are the main rumen microbes associated with methane emissions in dairy cattle.
PMID:35077540
Genome-wide analysis of mRNAs, lncRNAs, and circRNAs during intramuscular adipogenesis in Chinese Guizhou Congjiang pigs.
PMID:35077458
A simple guide to de novo transcriptome assembly and annotation.
PMID:35076693
Genome-Scale Modeling Specifies the Metabolic Capabilities of Rhizophagus irregularis.
PMID:35076269
Bioinformatic Analysis Identifies Biomarkers and Treatment Targets in Primary Sjögren's Syndrome Patients with Fatigue.
PMID:35075430
Construction and validation of a novel gene signature for predicting the prognosis of osteosarcoma.
PMID:35075228
Identification of key regulators in Sarcoidosis through multidimensional systems biological approach.
PMID:35075176
Identification of Molecular Biomarkers and Key Pathways for Esophageal Carcinoma (EsC): A Bioinformatics Approach.
PMID:35071597
A comprehensive characterization of the transcriptome in enzalutamide resistance prostate cancer.
PMID:35071476
Modular characteristics and the mechanism of Chinese medicine's treatment of gastric cancer: a data mining and pharmacology-based identification.
PMID:35071471
Immune-related gene expression in skin, inflamed and keloid tissue from patients with keloids.
PMID:35069881
Potential biomarkers of acute myocardial infarction based on co-expression network analysis.
PMID:35069843
Comparison between Heat-Clearing Medicine and Antirheumatic Medicine in Treatment of Gastric Cancer Based on Network Pharmacology, Molecular Docking, and Tumor Immune Infiltration Analysis.
PMID:35069767
Evaluation of the Prognostic Value of Long Noncoding RNAs in Lung Squamous Cell Carcinoma.
PMID:35069738
Integrative Analysis of the Metabolome and Transcriptome of a Cultivated Pepper and Its Wild Progenitor Chiltepin (Capsicum annuum L. var. glabriusculum) Revealed the Loss of Pungency During Capsicum Domestication.
PMID:35069640
Insight Into the Anti-staphylococcal Activity of JBC 1847 at Sub-Inhibitory Concentration.
PMID:35069485
CANT-HYD: A Curated Database of Phylogeny-Derived Hidden Markov Models for Annotation of Marker Genes Involved in Hydrocarbon Degradation.
PMID:35069469
Genetic context of oncogenic drivers dictates vascular sarcoma development in aP2-Cre mice.
PMID:35066877
Single-cell multi-omics reveals dyssynchrony of the innate and adaptive immune system in progressive COVID-19.
PMID:35064122
HERV-W Envelope Triggers Abnormal Dopaminergic Neuron Process through DRD2/PP2A/AKT1/GSK3 for Schizophrenia Risk.
PMID:35062349
Tumor microenvironment-related multigene prognostic prediction model for breast cancer.
PMID:35060926
Isolation, Classification, and Growth-Promoting Effects of Pantoea sp. YSD J2 from the Aboveground Leaves of Cyperus Esculentus L. var. sativus.
PMID:35059843
Pcyt2 deficiency causes age-dependant development of nonalcoholic steatohepatitis and insulin resistance that could be attenuated with phosphoethanolamine.
PMID:35058529
Gene expression profiles in Malpighian tubules of the vector leafhopper Psammotettix striatus (L.) revealed regional functional diversity and heterogeneity.
PMID:35057738
Structural Identification of Metalloproteomes in Marine Diatoms, an Efficient Algae Model in Toxic Metals Bioremediation.
PMID:35056698
Genetic and Comparative Genome Analysis of Exiguobacterium aurantiacum SW-20, a Petroleum-Degrading Bacteria with Salt Tolerance and Heavy Metal-Tolerance Isolated from Produced Water of Changqing Oilfield, China.
PMID:35056515
Metabolomic Profiles of the Creeping Wood Sorrel Oxalis corniculata in Radioactively Contaminated Fields in Fukushima: Dose-Dependent Changes in Key Metabolites.
PMID:35054508
The Interplay between Pathophysiological Pathways in Early-Onset Severe Preeclampsia Unveiled by Metabolomics.
PMID:35054479
Proteomic Response of Deinococcus radiodurans to Short-Term Real Microgravity during Parabolic Flight Reveals Altered Abundance of Proteins Involved in Stress Response and Cell Envelope Functions.
PMID:35054415
Deciphering Biomarkers for Leptomeningeal Metastasis in Malignant Hemopathies (Lymphoma/Leukemia) Patients by Comprehensive Multipronged Proteomics Characterization of Cerebrospinal Fluid.
PMID:35053611
Genomic Landscape of Vinflunine Response in Metastatic Urothelial Cancer.
PMID:35053540
Construction of Light-Responsive Gene Regulatory Network for Growth, Development and Secondary Metabolite Production in Cordyceps militaris.
PMID:35053069
Insights into the Host-Pathogen Interaction Pathways through RNA-Seq Analysis of Lens culinaris Medik. in Response to Rhizoctonia bataticola Infection.
PMID:35052429
Cytological, Biochemical, and Transcriptomic Analyses of a Novel Yellow Leaf Variation in a Paphiopedilum (Orchidaceae) SCBG COP15.
PMID:35052412
Stingray Venom Proteins: Mechanisms of Action Revealed Using a Novel Network Pharmacology Approach.
PMID:35049882
Genome-wide identification of bacterial colonization and fitness determinants on the floating macrophyte, duckweed.
PMID:35046504
A potential target gene CD63 for different degrees of intervertebral disc degeneration.
PMID:35046480
Analysis of soil bacterial communities and physicochemical properties associated with Fusarium wilt disease of banana in Malaysia.
PMID:35046475
Revealing potential diagnostic gene biomarkers of septic shock based on machine learning analysis.
PMID:35045818
Identification of hub genes associated with COVID-19 and idiopathic pulmonary fibrosis by integrated bioinformatics analysis.
PMID:35045126
Comparative analysis of protein-protein interaction networks in metastatic breast cancer.
PMID:35045088
Bioengineered models of Parkinson's disease using patient-derived dopaminergic neurons exhibit distinct biological profiles in a 3D microenvironment.
PMID:35044538
Valine feeding reduces ammonia production through rearrangement of metabolic fluxes in central carbon metabolism of CHO cells.
PMID:35044498
HER3 activation contributes toward the emergence of ALK inhibitor-tolerant cells in ALK-rearranged lung cancer with mesenchymal features.
PMID:35042943
Maternal-fetal immune responses in pregnant women infected with SARS-CoV-2.
PMID:35042863
N6-Methyladenosine-Related lncRNAs as potential biomarkers for predicting prognoses and immune responses in patients with cervical cancer.
PMID:35042477
Functional analysis of ADARs in planarians supports a bilaterian ancestral role in suppressing double-stranded RNA-response.
PMID:35041722
Elevational Constraints on the Composition and Genomic Attributes of Microbial Communities in Antarctic Soils.
PMID:35040702
Molecular docking-based computational platform for high-throughput virtual screening.
PMID:35039800
Two novel prognostic models for ovarian cancer respectively based on ferroptosis and necroptosis.
PMID:35039008
Intestinal Claudin-7 deficiency impacts the intestinal microbiota in mice with colitis.
PMID:35039003
An integrative analysis of DNA methylation and transcriptome showed the dysfunction of MAPK pathway was involved in the damage of human chondrocyte induced by T-2 toxin.
PMID:35038982
Inflammatory activation and immune cell infiltration are main biological characteristics of SARS-CoV-2 infected myocardium.
PMID:35037831
Screening and Identification of Key Biomarkers in Lower Grade Glioma via Bioinformatical Analysis.
PMID:35035531
Autoimmune gastritis induces aberrant DNA methylation reflecting its carcinogenic potential.
PMID:35034200
Bi-allelic SMO variants in hypothalamic hamartoma: a recessive cause of Pallister-Hall syndrome.
PMID:35034092
Impact of Helicobacter pylori infection on fluid duodenal microbial community structure and microbial metabolic pathways.
PMID:35033024
Identification of a ferroptosis-related gene pair biomarker with immune infiltration landscapes in ischemic stroke: a bioinformatics-based comprehensive study.
PMID:35033021
Aristotle: stratified causal discovery for omics data.
PMID:35033007
Enrichment of phosphate-accumulating organisms (PAOs) in a microfluidic model biofilm system by mimicking a typical aerobic granular sludge feast/famine regime.
PMID:35032186
Pathogen resistance in Sphagneticola trilobata (Singapore daisy): molecular associations and differentially expressed genes in response to disease from a widespread fungus.
PMID:35031940
Human plasma pregnancy-associated miRNAs and their temporal variation within the first trimester of pregnancy.
PMID:35031065
BATF promotes group 2 innate lymphoid cell-mediated lung tissue protection during acute respiratory virus infection.
PMID:35030033
Plasma metabolomics of autism spectrum disorder and influence of shared components in proband families.
PMID:35028569
Promising novel biomarkers and candidate small-molecule drugs for lung adenocarcinoma: Evidence from bioinformatics analysis of high-throughput data.
PMID:35028418
Single-cell transcriptomics of human iPSC differentiation dynamics reveal a core molecular network of Parkinson's disease.
PMID:35027645
Respiratory tract infections and gut microbiome modifications: A systematic review.
PMID:35025938
Danger signal extracellular calcium initiates differentiation of monocytes into SPP1/osteopontin-producing macrophages.
PMID:35022393
Tubastatin A maintains adult skeletal muscle stem cells in a quiescent state ex vivo and improves their engraftment ability in vivo.
PMID:35021050
Endothelial and systemic upregulation of miR-34a-5p fine-tunes senescence in progeria.
PMID:35020601
Metagenomic and Metatranscriptomic Responses of Chemical Dispersant Application during a Marine Dilbit Spill.
PMID:35020455
Identification of the Key Immune-Related Genes in Chronic Obstructive Pulmonary Disease Based on Immune Infiltration Analysis.
PMID:35018096
Chromosome-level genome assembly of Bactrocera dorsalis reveals its adaptation and invasion mechanisms.
PMID:35017661
Chromosome-level genome assembly of Zizania latifolia provides insights into its seed shattering and phytocassane biosynthesis.
PMID:35017643
Identification of the pivotal role of SPP1 in kidney stone disease based on multiple bioinformatics analysis.
PMID:35016690
Genome-Resolved Metagenomics Reveals Distinct Phosphorus Acquisition Strategies between Soil Microbiomes.
PMID:35014868
NETME: on-the-fly knowledge network construction from biomedical literature.
PMID:35013714
Transplantation of umbilical cord-derived mesenchymal stem cells promotes the recovery of thin endometrium in rats.
PMID:35013490
Linkage mapping and QTL analysis of growth traits in Rhopilema esculentum.
PMID:35013486
The impact of methodology on the reproducibility and rigor of DNA methylation data.
PMID:35013473
RNAseq reveals extensive metabolic disruptions in the sensitive SF-295 cell line treated with schweinfurthins.
PMID:35013404
Streamlined single-cell proteomics by an integrated microfluidic chip and data-independent acquisition mass spectrometry.
PMID:35013269
A pilot exploration of multi-omics research of gut microbiome in major depressive disorders.
PMID:35013099
The genome of oil-Camellia and population genomics analysis provide insights into seed oil domestication.
PMID:35012630
Comprehensive analysis of expression profile and prognostic significance of interferon regulatory factors in pancreatic cancer.
PMID:35012444
UHPLC-HRMS-Based Untargeted Lipidomics Reveal Mechanism of Antifungal Activity of Carvacrol against Aspergillus flavus.
PMID:35010219
Preventive Effect of Anemarrhenae rhizome and Phellodendri cortex on Danazol-Induced in Precocious Puberty in Female Rats and Network Pharmacological Analysis of Active Compounds.
PMID:35009026
Metabolic Processes Are Differentially Regulated During Wild-Type and Attenuated Dengue Virus Infection in Aedes aegypti.
PMID:35008057
Comprehensive Analysis Revealed that CDKN2A is a Biomarker for Immune Infiltrates in Multiple Cancers.
PMID:35004697
Comprehensive Analysis of the Prognostic Values of the TRIM Family in Hepatocellular Carcinoma.
PMID:35004288
Searching beyond the streetlight: Neonicotinoid exposure alters the neurogenomic state of worker honey bees.
PMID:35003705
CYP1B1-AS1 Is a Novel Biomarker in Glioblastoma by Comprehensive Analysis.
PMID:35003394
Identification of Keratinocyte Differentiation-Involved Genes for Metastatic Melanoma by Gene Expression Profiles.
PMID:35003328
Bacteriome of Moist Smokeless Tobacco Products Consumed in India With Emphasis on the Predictive Functional Potential.
PMID:35003015
ADAMTS8 Expression is a Potential Prognostic Biomarker for Postoperative Metastasis in Lymph Node-Negative Early-Stage Invasive Breast Carcinoma Patients.
PMID:35002288
CD73 induces GM-CSF/MDSC-mediated suppression of T cells to accelerate pancreatic cancer pathogenesis.
PMID:35001076
A Chromosome-Level Genome Assembly of the Pygmy Mole Cricket Xya riparia.
PMID:34999819
MIMOSA2: A metabolic network-based tool for inferring mechanism-supported relationships in microbiome-metabolome data.
PMID:34999748
Membrane tension sensing molecule-FNBP1 is a prognostic biomarker related to immune infiltration in BRCA, LUAD and STAD.
PMID:34998385
Chicken blastoderms and primordial germ cells possess a higher expression of DNA repair genes and lower expression of apoptosis genes to preserve their genome stability.
PMID:34997179
Epithelial-mesenchymal transition related genes in unruptured aneurysms identified through weighted gene coexpression network analysis.
PMID:34997174
Stage specific comparative transcriptomic analysis to reveal gene networks regulating iron and zinc content in pearl millet [Pennisetum glaucum (L.) R. Br.].
PMID:34997160
Objective to identify and verify the regulatory mechanism of DTNBP1 as a prognostic marker for hepatocellular carcinoma.
PMID:34997064
Regulation of gene expression by the APP family in the adult cerebral cortex.
PMID:34997052
Identification of vaccine and drug targets in Shigella dysenteriae sd197 using reverse vaccinology approach.
PMID:34997046
Identification of an at-risk subpopulation with high immune infiltration based on the peroxisome pathway and TIM3 in colorectal cancer.
PMID:34996408
Digital gene expression analysis of NSCLC-patients reveals strong immune pressure, resulting in an immune escape under immunotherapy.
PMID:34996407
Maize/peanut intercropping improves nutrient uptake of side-row maize and system microbial community diversity.
PMID:34996375
Long-read transcriptome sequencing provides insight into lignan biosynthesis during fruit development in Schisandra chinensis.
PMID:34996357
Combined assembly of long and short sequencing reads improve the efficiency of exploring the soil metagenome.
PMID:34996356
Deep learning-based brain transcriptomic signatures associated with the neuropathological and clinical severity of Alzheimer's disease.
PMID:34993477
mmu-miR-145a-5p Accelerates Diabetic Wound Healing by Promoting Macrophage Polarization Toward the M2 Phenotype.
PMID:34993211
Unravelling Rubber Tree Growth by Integrating GWAS and Biological Network-Based Approaches.
PMID:34992619
Genome-wide association study identifies SNPs for growth performance and serum indicators in Valgus-varus deformity broilers (Gallus gallus) using ddGBS sequencing.
PMID:34991478
Predicting the targets of IRF8 and NFATc1 during osteoclast differentiation using the machine learning method framework cTAP.
PMID:34991467
Prediction of trehalose-metabolic pathway and comparative analysis of KEGG, MetaCyc, and RAST databases based on complete genome of Variovorax sp. PAMC28711.
PMID:34991451
Marine pollutant exposures and human milk extracellular vesicle-microRNAs in a mother-infant cohort from the Faroe Islands.
PMID:34991248
In search of autophagy biomarkers in breast cancer: Receptor status and drug agnostic transcriptional changes during autophagy flux in cell lines.
PMID:34990474
Evaluating the aerobic xylene-degrading potential of the intrinsic microbial community of a legacy BTEX-contaminated aquifer by enrichment culturing coupled with multi-omics analysis: uncovering the role of Hydrogenophaga strains in xylene degradation.
PMID:34989990
Evaluation of CRISPR gene-editing tools in zebrafish.
PMID:34986794
Exploration the potential mechanism of the SIRT1 and its target gene FOXO1/PPARGC1A in uteropelvic junction obstruction.
PMID:34984185
Trifolium pratense ethanolic extract alters the gut microbiota composition and regulates serum lipid profile in the ovariectomized rats.
PMID:34983484
Transcriptional analysis of Bemisia tabaci MEAM1 cryptic species under the selection pressure of neonicotinoids imidacloprid, acetamiprid and thiamethoxam.
PMID:34983398
Inferring the genetic responses to acute drought stress across an ecological gradient.
PMID:34983380
Transcriptome analysis to identify the downstream genes of androgen receptor in dermal papilla cells.
PMID:34983378
Genome-wide identification and functional analysis of circRNAs in Trichophyton rubrum conidial and mycelial stages.
PMID:34983376
Genome-wide analysis of genetic predisposition to common polygenic cancers.
PMID:34981446
Systems Biology and Bioinformatics approach to Identify blood based signatures molecules and drug targets of patient with COVID-19.
PMID:34981034
Metagenomic and metatranscriptomic analyses reveal minor-yet-crucial roles of gut microbiome in deep-sea hydrothermal vent snail.
PMID:34980289
Screening and analysis of RNAs associated with activated memory CD4 and CD8 T cells in liver cancer.
PMID:34980144
Canine transmissible venereal tumour established in immunodeficient mice reprograms the gene expression profiles associated with a favourable tumour microenvironment to enable cancer malignancy.
PMID:34980125
Genome-wide association studies for growth traits in broilers.
PMID:34979907
Comprehensive analysis of the long noncoding RNA-associated competitive endogenous RNA network in the osteogenic differentiation of periodontal ligament stem cells.
PMID:34979896
Analysis of Microarray Data from Medulloblastoma Tissue Samples.
PMID:34978688
Capturing the transcription factor interactome in response to sub-lethal insecticide exposure.
PMID:34977825
Antigen presentation and interferon signatures in B cells driven by localized ablative cancer immunotherapy correlate with extended survival.
PMID:34976205
A Novel Model of Tumor-Infiltrating B Lymphocyte Specific RNA-Binding Protein-Related Genes With Potential Prognostic Value and Therapeutic Targets in Multiple Myeloma.
PMID:34976013
Comparative de novo transcriptome analysis identifies salinity stress responsive genes and metabolic pathways in sugarcane and its wild relative Erianthus arundinaceus [Retzius] Jeswiet.
PMID:34972826
Multiplex-Heterogeneous Network-Based Capturing Potential SNP "Switches" of Pathways Associating With Diverse Disease Characteristics of Asthma.
PMID:34970542
Inositol 1,4,5-trisphosphate receptor type 3 is involved in resistance to apoptosis and maintenance of human hepatocellular carcinoma.
PMID:34966448
Energy at Origins: Favorable Thermodynamics of Biosynthetic Reactions in the Last Universal Common Ancestor (LUCA).
PMID:34966373
Spatiotemporal localization of proteins in mycobacteria.
PMID:34965429
Network pharmacology-based strategy to investigate the active ingredients and molecular mechanisms of Scutellaria Barbata D. Don against radiation pneumonitis.
PMID:34964782
Bioinformatics analysis of candidate genes and potential therapeutic drugs targeting adipose tissue in obesity.
PMID:34964707
Absorbance or organization into ankylosis: a microarray analysis of haemarthrosis in a sheep model of temporomandibular joint trauma.
PMID:34961493
Plasma metabolomic profiling of hypertrophic cardiomyopathy patients before and after surgical myectomy suggests postoperative improvement in metabolic function.
PMID:34961475
Investigating the biochemical effects of heat stress and sample quenching approach on the metabolic profiling of abalone (Haliotis iris).
PMID:34958425
Integral Analyses of Competing Endogenous RNA Mechanisms and DNA Methylation Reveal Regulatory Mechanisms in Osteosarcoma.
PMID:34957096
Combined Metabolome and Transcriptome Analyses of Young, Mature, and Old Rhizome Tissues of Zingiber officinale Roscoe.
PMID:34956334
Vitamin D Treatment Sequence Is Critical for Transcriptome Modulation of Immune Challenged Primary Human Cells.
PMID:34956186
Taxonomy and Functional Diversity in the Fecal Microbiome of Beef Cattle Reared in Brazilian Traditional and Semi-Intensive Production Systems.
PMID:34956130
Plasma Exosomal Mir-423-5p Is Involved in the Occurrence and Development of Bicuspid Aortopathy via TGF-β/SMAD2 Pathway.
PMID:34955881
9-ING-41, a Small Molecule Inhibitor of GSK-3β, Potentiates the Effects of Chemotherapy on Colorectal Cancer Cells.
PMID:34955846
A high-resolution mass spectrometry based proteomic dataset of human regulatory T cells.
PMID:34950757
Captivity Influences the Gut Microbiome of Rhinopithecus roxellana.
PMID:34950117
In Silico Prediction and Bioactivity Evaluation of Chemical Ingredients Against Influenza A Virus From Isatis tinctoria L.
PMID:34950027
Limited allele-specific gene expression in highly polyploid sugarcane.
PMID:34949669
NMR Hydrophilic Metabolomic Analysis of Bacterial Resistance Pathways Using Multivalent Antimicrobials with Challenged and Unchallenged Wild Type and Mutated Gram-Positive Bacteria.
PMID:34948402
Drought and Subsequent Soil Flooding Affect the Growth and Metabolism of Savoy Cabbage.
PMID:34948111
Combined Transcriptome and Metabolome Analysis of Alfalfa Response to Thrips Infection.
PMID:34946916
Analysis of Serum Biochemical Indexes, Egg Quality, and Liver Transcriptome in Laying Hens Fed Diets Supplemented with Gynostemma pentaphyllum Powder.
PMID:34946891
Microbial Community Dynamics during Biodegradation of Crude Oil and Its Response to Biostimulation in Svalbard Seawater at Low Temperature.
PMID:34946026
Predictive Biomarkers of Age-Related Macular Degeneration Response to Anti-VEGF Treatment.
PMID:34945801
Clinicopathological and Molecular Prognostic Classifier for Intermediate/High-Risk Clear Cell Renal Cell Carcinoma.
PMID:34944958
8-Hydroxydaidzein Downregulates JAK/STAT, MMP, Oxidative Phosphorylation, and PI3K/AKT Pathways in K562 Cells.
PMID:34944720
Sedimentary Cobalt Protoporphyrin as a Potential Precursor of Prosthetic Heme Group for Bacteria Inhabiting Fossil Organic Matter-Rich Shale Rock.
PMID:34944556
A System-Level Mechanism of Anmyungambi Decoction for Obesity: A Network Pharmacological Approach.
PMID:34944525
Deepening into Intracellular Signaling Landscape through Integrative Spatial Proteomics and Transcriptomics in a Lymphoma Model.
PMID:34944421
Ascorbic Acid/Retinol and/or Inflammatory Stimuli's Effect on Proliferation/Differentiation Properties and Transcriptomics of Gingival Stem/Progenitor Cells.
PMID:34943818
CCN2 Aggravates the Immediate Oxidative Stress-DNA Damage Response following Renal Ischemia-Reperfusion Injury.
PMID:34943123
Genome-Wide RNAi Screening Identifies Novel Pathways/Genes Involved in Oxidative Stress and Repurposable Drugs to Preserve Cystic Fibrosis Airway Epithelial Cell Integrity.
PMID:34943039
Amycolatopsis aidingensis sp. nov., a Halotolerant Actinobacterium, Produces New Secondary Metabolites.
PMID:34938275
Untargeted metabolomics study on the effects of rearing ducks in cages on bone quality.
PMID:34936950
Transcriptomic analysis of synchrony and productivity in self-cycling fermentation of engineered yeast producing shikimic acid.
PMID:34934640
Identification of potential key genes and functional role of CENPF in osteosarcoma using bioinformatics and experimental analysis.
PMID:34934449
Whole Genome Sequencing of First Janibacter indicus Isolate in China Revealed Three Unique Genomic Islands Compared with Saprophytic Strains.
PMID:34934330
Comprehensive analysis of the ceRNA network in coronary artery disease.
PMID:34930980
MYCL promotes iPSC-like colony formation via MYC Box 0 and 2 domains.
PMID:34930932
Circadian key component CLOCK/BMAL1 interferes with segmentation clock in mouse embryonic organoids.
PMID:34930826
Comparative transcriptome and DNA methylation analysis in temperature-sensitive genic male sterile wheat BS366.
PMID:34930131
GIP: an open-source computational pipeline for mapping genomic instability from protists to cancer cells.
PMID:34928370
Biochar Addition Altered Bacterial Community and Improved Photosynthetic Rate of Seagrass: A Mesocosm Study of Seagrass Thalassia hemprichii.
PMID:34925287
Altered microRNAs in C3H10T1/2 cells induced by p.E95K mutant IHH signaling.
PMID:34922634
Profiles of immune cell infiltration and immune-related genes in the tumor microenvironment of osteosarcoma cancer.
PMID:34922489
Recurring exposure to low humidity induces transcriptional and protein level changes in the vocal folds of rabbits.
PMID:34921171
Shotgun sequence-based metataxonomic and predictive functional profiles of Pe poke, a naturally fermented soybean food of Myanmar.
PMID:34919575
Worldwide distribution and environmental origin of the Adelaide imipenemase (AIM-1), a potent carbapenemase in Pseudomonas aeruginosa.
PMID:34919514
Identification of a Lipid Metabolism-Associated Gene Signature Predicting Survival in Breast Cancer.
PMID:34916832
Oxidative stress and expression of inflammatory factors in lung tissue of acute mountain sickness rats.
PMID:34913080
Identification of Key Deregulated RNA-Binding Proteins in Pancreatic Cancer by Meta-Analysis and Prediction of Their Role as Modulators of Oncogenesis.
PMID:34912796
Exploring Pathway-Based Group Lasso for Cancer Survival Analysis: A Special Case of Multi-Task Learning.
PMID:34912376
Integrated Metabolic Profiling and Transcriptional Analysis Reveals Therapeutic Modalities for Targeting Rapidly Proliferating Breast Cancers.
PMID:34911787
Understanding the Gut Microbiota in Pediatric Patients with Alopecia Areata and their Siblings: A Pilot Study.
PMID:34909748
Complete Genome Sequence of the Type Strain Tepidimonas taiwanensis LMG 22826T, a Thermophilic Alkaline Protease and Polyhydroxyalkanoate Producer.
PMID:34908127
Competitive endogenous RNA network and pathway-based analysis of LncRNA single-nucleotide polymorphism in myasthenia gravis.
PMID:34907261
Genetic stability of Aedes aegypti populations following invasion by wMel Wolbachia.
PMID:34906084
Mammalian gut metabolomes mirror microbiome composition and host phylogeny.
PMID:34903850
Longitudinal DNA methylation dynamics as a practical indicator in clinical epigenetics.
PMID:34903243
Effects of various artificial agarwood-induction techniques on the metabolome of Aquilaria sinensis.
PMID:34903180
The effect of lipocalin-2 (LCN2) on apoptosis: a proteomics analysis study in an LCN2 deficient mouse model.
PMID:34903175
Analogous Metabolic Decoupling in Pseudomonas putida and Comamonas testosteroni Implies Energetic Bypass to Facilitate Gluconeogenic Growth.
PMID:34903058
Development of an Oxidative Phosphorylation-Related and Immune Microenvironment Prognostic Signature in Uterine Corpus Endometrial Carcinoma.
PMID:34901000
Whole-transcriptome analysis of aluminum-exposed rat hippocampus and identification of ceRNA networks to investigate neurotoxicity of Al.
PMID:34900398
Wheat Apoplast-Localized Lipid Transfer Protein TaLTP3 Enhances Defense Responses Against Puccinia triticina.
PMID:34899796
The prognostic value of plasma complement factor B (CFB) in thyroid carcinoma.
PMID:34898340
Transcriptional Profiling of Early and Late Phases of Bovine Tuberculosis.
PMID:34898250
Soluble amyloid-beta isoforms predict downstream Alzheimer's disease pathology.
PMID:34895338
Transcriptome sequencing reveals a lncRNA-mRNA interaction network in extramammary Paget's disease.
PMID:34895219
Genome-wide association of single nucleotide polymorphism loci and candidate genes for frogeye leaf spot (Cercospora sojina) resistance in soybean.
PMID:34895144
Exploiting Aerobic Carboxydotrophic Bacteria for Industrial Biotechnology.
PMID:34894287
Genetic insights into the regulatory pathways for continuous flowering in a unique orchid Arundina graminifolia.
PMID:34893019
PIK3R1, SPNB2, and CRYAB as Potential Biomarkers for Patients with Diabetes and Developing Acute Myocardial Infarction.
PMID:34887920
Chromosome-Level Genome Assembly of the Burbot (Lota lota) Using Nanopore and Hi-C Technologies.
PMID:34887901
Transcriptomic Characterization of the Effects of Selenium on Maize Seedling Growth.
PMID:34887883
S100A2 Is a Prognostic Biomarker Involved in Immune Infiltration and Predict Immunotherapy Response in Pancreatic Cancer.
PMID:34887861
Evolution of a histone variant involved in compartmental regulation of NAD metabolism.
PMID:34887560
Toward quantifying the adaptive role of bacterial pangenomes during environmental perturbations.
PMID:34887548
iTRAQ based protein profile analysis revealed key proteins involved in regulation of drought-tolerance during seed germination in Adzuki bean.
PMID:34887505
Identifying the essential nutritional requirements of the probiotic bacteria Bifidobacterium animalis and Bifidobacterium longum through genome-scale modeling.
PMID:34887435
Meta-analyses identify DNA methylation associated with kidney function and damage.
PMID:34887417
Epigenome-wide association study of serum urate reveals insights into urate co-regulation and the SLC2A9 locus.
PMID:34887389
Transcriptomic and metabolomic changes triggered by Macrosiphum rosivorum in rose (Rosa longicuspis).
PMID:34886808
Deep Proteomic Analysis on Biobanked Paraffine-Archived Melanoma with Prognostic/Predictive Biomarker Read-Out.
PMID:34885218
A Computational Analysis in a Cohort of Parkinson's Disease Patients and Clock-Modified Colorectal Cancer Cells Reveals Common Expression Alterations in Clock-Regulated Genes.
PMID:34885088
The MAPK Signaling Pathway Presents Novel Molecular Targets for Therapeutic Intervention after Traumatic Spinal Cord Injury: A Comparative Cross-Species Transcriptional Analysis.
PMID:34884738
Alterations in Metabolome and Microbiome Associated with an Early Stress Stage in Male Wistar Rats: A Multi-Omics Approach.
PMID:34884735
The salivary metatranscriptome as an accurate diagnostic indicator of oral cancer.
PMID:34880265
Integrated analysis of the functions and prognostic values of RNA-binding proteins in neuroblastoma.
PMID:34879089
Identifying the temporal electrophysiological and molecular changes that contribute to TSC-associated epileptogenesis.
PMID:34877936
Functional organization of the maternal and paternal human 4D Nucleome.
PMID:34877507
A computational approach for the discovery of significant cancer genes by weighted mutation and asymmetric spreading strength in networks.
PMID:34876593
Attenuated expression of SNF5 facilitates progression of bladder cancer via STAT3 activation.
PMID:34876150
Comparative transcriptome analysis reveals compatible and recalcitrant genotypic response of barley microspore-derived embryogenic callus toward Agrobacterium infection.
PMID:34876002
The effect and mechanism of Jiao-tai-wan in the treatment of diabetes mellitus with depression based on network pharmacology and experimental analysis.
PMID:34875999
Adapting Macroecology to Microbiology: Using Occupancy Modeling To Assess Functional Profiles across Metagenomes.
PMID:34874772
Understanding host-microbiota interactions in the commercial piglet around weaning.
PMID:34873196
reString: an open-source Python software to perform automatic functional enrichment retrieval, results aggregation and data visualization.
PMID:34873191
iTRAQ-based quantitative proteome analysis insights into cold stress of Winter Rapeseed (Brassica rapa L.) grown in the field.
PMID:34873178
Single cell sequencing analysis identifies genetics-modulated ORMDL3+ cholangiocytes having higher metabolic effects on primary biliary cholangitis.
PMID:34872583
Transcriptomic Characterization of Tuberculous Sputum Reveals a Host Warburg Effect and Microbial Cholesterol Catabolism.
PMID:34872348
Identification of Galectin-3 as Potential Biomarkers for Renal Fibrosis by RNA-Sequencing and Clinicopathologic Findings of Kidney Biopsy.
PMID:34869439
Single-Cell RNA Sequencing Defines the Regulation of Spermatogenesis by Sertoli-Cell Androgen Signaling.
PMID:34869354
Starvation to Glucose Reprograms Development of Neurovascular Unit in Embryonic Retinal Cells.
PMID:34869314
Transcriptome Profiling of the Salt Stress Response in the Leaves and Roots of Halophytic Eutrema salsugineum.
PMID:34868259
Artificial Intelligence in Functional Food Ingredient Discovery and Characterisation: A Focus on Bioactive Plant and Food Peptides.
PMID:34868255
Chromosome-Scale Reference Genome of Amphicarpaea edgeworthii: A New Resource for Amphicarpic Plants Research and Complex Flowering Pattern.
PMID:34868169
Identification of Potential Genes in Pathogenesis and Diagnostic Value Analysis of Partial Androgen Insensitivity Syndrome Using Bioinformatics Analysis.
PMID:34867780
Hepatectomy-Induced Alterations in Hepatic Perfusion and Function - Toward Multi-Scale Computational Modeling for a Better Prediction of Post-hepatectomy Liver Function.
PMID:34867441
Computational Network Pharmacology-Based Strategy to Capture Key Functional Components and Decode the Mechanism of Chai-Hu-Shu-Gan-San in Treating Depression.
PMID:34867413
The Pharmacological Mechanism of Guchangzhixie Capsule Against Experimental Colitis.
PMID:34867387
Sparse Regression in Cancer Genomics: Comparing Variable Selection and Predictions in Real World Data.
PMID:34866896
Network analytics for drug repurposing in COVID-19.
PMID:34864885
Association of low-frequency and rare coding variants with information processing speed.
PMID:34864818
Comparative transcriptomic analysis of gonadal development and renewal in the ovoviviparous black rockfish (Sebastes schlegelii).
PMID:34863110
Integrated metabolic and microbial analysis reveals host-microbial interactions in IgE-mediated childhood asthma.
PMID:34862469
Identification of the ferroptosis-related long non-coding RNAs signature to improve the prognosis prediction and immunotherapy response in patients with NSCLC.
PMID:34861872
Potential Mechanism of Dingji Fumai Decoction Against Atrial Fibrillation Based on Network Pharmacology, Molecular Docking, and Experimental Verification Integration Strategy.
PMID:34859062
The Transcriptional Differences of Avian CD4+CD8+ Double-Positive T Cells and CD8+ T Cells From Peripheral Blood of ALV-J Infected Chickens Revealed by Smart-Seq2.
PMID:34858872
Topical Application of Temperature-Sensitive Gel Containing Caerin 1.1 and 1.9 Peptides on TC-1 Tumour-Bearing Mice Induced High-Level Immune Response in the Tumour Microenvironment.
PMID:34858827
Key Markers Involved in the Anticolon Cancer Response of CD8+ T Cells through the Regulation of Cholesterol Metabolism.
PMID:34858500
Comparative Transcriptome Sequencing of Taro Corm Development With a Focus on the Starch and Sucrose Metabolism Pathway.
PMID:34858484
Inferring Differential Networks by Integrating Gene Expression Data With Additional Knowledge.
PMID:34858477
Bacterial challenge-associated metabolic phenotypes in Hermetia illucens defining nutritional and functional benefits.
PMID:34857836
Multiomics analysis of soybean meal induced marine fish enteritis in juvenile pearl gentian grouper, Epinephelus fuscoguttatus ♀ × Epinephelus lanceolatus ♂.
PMID:34857775
Functional enrichment of alternative splicing events with NEASE reveals insights into tissue identity and diseases.
PMID:34857024
Exploring cell-specific miRNA regulation with single-cell miRNA-mRNA co-sequencing data.
PMID:34856921
Identification of the Active Constituents and Significant Pathways of Shen-qi-Yi-zhu Decoction on Antigastric Cancer: A Network Pharmacology Research and Experimental Validation.
PMID:34853601
Investigation of hub gene associated with the infection of Staphylococcus aureus via weighted gene co-expression network analysis.
PMID:34852788
PRODORIC: state-of-the-art database of prokaryotic gene regulation.
PMID:34850133
Transcriptomic dataset for Sardina pilchardus: Assembly, annotation, and expression of nine tissues.
PMID:34849383
Oral microbiome associated with lymph node metastasis in oral squamous cell carcinoma.
PMID:34848792
Genome-wide unbalanced expression bias and expression level dominance toward Brassica oleracea in artificially synthesized intergeneric hybrids of Raphanobrassica.
PMID:34848691
Identification and Potential Mechanisms of a 7-MicroRNA Signature That Predicts Prognosis in Patients with Lower-Grade Glioma.
PMID:34845420
The impact of bacterial diversity on resistance to biocides in oilfields.
PMID:34845279
Tracing TET1 expression in prostate cancer: discovery of malignant cells with a distinct oncogenic signature.
PMID:34844636
Transcriptome analysis of lncRNA expression patterns in human congenital lung malformations.
PMID:34844556
Knowledge-guided artificial intelligence technologies for decoding complex multiomics interactions in cells.
PMID:34844399
Epididymal mRNA and miRNA transcriptome analyses reveal important genes and miRNAs related to sperm motility in roosters.
PMID:34844112
Transcriptome sequencing revealed the influence of blue light on the expression levels of light-stress response genes in Centella asiatica.
PMID:34843573
Brain transcriptomes of zebrafish and mouse Alzheimer's disease knock-in models imply early disrupted energy metabolism.
PMID:34842276
Living with a giant, flowering parasite: metabolic differences between Tetrastigma loheri Gagnep. (Vitaceae) shoots uninfected and infected with Rafflesia (Rafflesiaceae) and potential applications for propagation.
PMID:34841446
The mRNA-LNP platform's lipid nanoparticle component used in preclinical vaccine studies is highly inflammatory.
PMID:34841223
Identification of Hub Gene GRIN1 Correlated with Histological Grade and Prognosis of Glioma by Weighted Gene Coexpression Network Analysis.
PMID:34840971
Network Pharmacology-Based Study on the Active Component and Mechanism of the Anti-Gastric-Cancer Effect of Herba Sarcandrae.
PMID:34840695
Bacteroidota and Lachnospiraceae integration into the gut microbiome at key time points in early life are linked to infant neurodevelopment.
PMID:34839801
A rice gene encoding glycosyl hydrolase plays contrasting roles in immunity depending on the type of pathogens.
PMID:34839574
Cluster analysis and profiling of airway fluid metabolites in pediatric acute hypoxemic respiratory failure.
PMID:34836982
Identification of transcriptomics biomarkers for the early prediction of the prognosis of septic shock from pneumopathies.
PMID:34836493
Vaccine Hyporesponse Induced by Individual Antibiotic Treatment in Mice and Non-Human Primates Is Diminished upon Recovery of the Gut Microbiome.
PMID:34835271
Light Deficiency Inhibits Growth by Affecting Photosynthesis Efficiency as well as JA and Ethylene Signaling in Endangered Plant Magnolia sinostellata.
PMID:34834626
Identification of Differentially Expressed Genes in Different Glioblastoma Regions and Their Association with Cancer Stem Cell Development and Temozolomide Response.
PMID:34834399
Automated Exploration of Prebiotic Chemical Reaction Space: Progress and Perspectives.
PMID:34833016
PI3K/AKT/mTOR Signaling Pathway Is Required for JCPyV Infection in Primary Astrocytes.
PMID:34831441
Identification of Impacted Pathways and Transcriptomic Markers as Potential Mediators of Pulmonary Fibrosis in Transgenic Mice Expressing Human IGFBP5.
PMID:34830489
Global Analysis of Transcriptome and Translatome Revealed That Coordinated WNT and FGF Regulate the Carapacial Ridge Development of Chinese Soft-Shell Turtle.
PMID:34830331
Excess Heritability Contribution of Alcohol Consumption Variants in the "Missing Heritability" of Type 2 Diabetes Mellitus.
PMID:34830198
Identification of Disease-Related Genes That Are Common between Alzheimer's and Cardiovascular Disease Using Blood Genome-Wide Transcriptome Analysis.
PMID:34829754
MicroRNA Sequencing Analysis in Obstructive Sleep Apnea and Depression: Anti-Oxidant and MAOA-Inhibiting Effects of miR-15b-5p and miR-92b-3p through Targeting PTGS1-NF-κB-SP1 Signaling.
PMID:34829725
The Role of CDK4 in the Pathogenesis of Pancreatic Cancer.
PMID:34828525
Comprehensive Analysis of miRNAs and Target mRNAs between Immature and Mature Testis Tissue in Chinese Red Steppes Cattle.
PMID:34827757
Proteasome Inhibition Is an Effective Treatment Strategy for Microsporidia Infection in Honey Bees.
PMID:34827599
Proteomics Profiling with SWATH-MS Quantitative Analysis of Changes in the Human Brain with HIV Infection Reveals a Differential Impact on the Frontal and Temporal Lobes.
PMID:34827437
Fine-mapping and identification of a candidate gene controlling seed coat color in melon (Cucumis melo L. var. chinensis Pangalo).
PMID:34825925
Mechanism of quercetin therapeutic targets for Alzheimer disease and type 2 diabetes mellitus.
PMID:34824300
The telomere length landscape of prostate cancer.
PMID:34824250
Heterogeneous recruitment abilities to RNA polymerases generate nonlinear scaling of gene expression with cell volume.
PMID:34824198
Identification of miRNA-mRNA network and immune-related gene signatures in IgA nephropathy by integrated bioinformatics analysis.
PMID:34823491
MetaFetcheR: An R Package for Complete Mapping of Small-Compound Data.
PMID:34822401
The Hitchhiker's Guide to Untargeted Lipidomics Analysis: Practical Guidelines.
PMID:34822371
Effects of photodeoxygenation on cell biology using dibenzothiophene S-oxide derivatives as O(3P)-precursors.
PMID:34822125
Development of a bioinformatics platform for analysis of quantitative transcriptomics and proteomics data: the OMnalysis.
PMID:34820180
An evolutionary functional genomics approach identifies novel candidate regions involved in isoniazid resistance in Mycobacterium tuberculosis.
PMID:34819627
Development of a chemogenomics library for phenotypic screening.
PMID:34819133
Urinary peptidomics reveals proteases involved in idiopathic membranous nephropathy.
PMID:34819020
A 3D primary human cell-based in vitro model of non-alcoholic steatohepatitis for efficacy testing of clinical drug candidates.
PMID:34815444
Secondary electrospray ionization-high resolution mass spectrometry (SESI-HRMS) fingerprinting enabled treatment monitoring of pulmonary carcinoma cells in real time.
PMID:34815037
Rapidly evolving genetic features for desert adaptations in Stipagrostis pennata.
PMID:34814836
Microbiota links to neural dynamics supporting threat processing.
PMID:34811847
Effect of Insulin Receptor-Knockdown on the Expression Levels of Blood-Brain Barrier Functional Proteins in Human Brain Microvascular Endothelial Cells.
PMID:34811625
Nutritional evaluation and transcriptome analyses of short-time germinated seeds in soybean (Glycine max L. Merri.).
PMID:34811436
Integrative transcriptomic and metabolomic analysis of D-leaf of seven pineapple varieties differing in N-P-K% contents.
PMID:34809576
Bacteroides spp. promotes branched-chain amino acid catabolism in brown fat and inhibits obesity.
PMID:34805797
Mechanistic Target of Rapamycin Complex 2 Regulation of the Primary Human Trophoblast Cell Transcriptome.
PMID:34805133
A Single Human-Relevant Fast Food Meal Rapidly Reorganizes Metabolomic and Transcriptomic Signatures in a Gut Microbiota-Dependent Manner.
PMID:34804604
Comprehensive Metabolome and Volatilome Analyses in Eggplant and Tomato Reveal Their Differential Responses to Tuta absoluta Infestation.
PMID:34804095
Genome-Wide Analyses of Proteome and Acetylome in Zymomonas mobilis Under N2-Fixing Condition.
PMID:34803957
Selecting Hub Genes and Predicting Target Genes of microRNAs in Tuberculosis via the Bioinformatics Analysis.
PMID:34803519
Analyzing differentially expressed genes and pathways of Bex2-deficient mouse lung via RNA-Seq.
PMID:34803456
Molecular pathways involved in COVID-19 and potential pathway-based therapeutic targets.
PMID:34801852
Seasonal diets supersede host species in shaping the distal gut microbiota of Yaks and Tibetan sheep.
PMID:34799677
Insulin resistance rewires the metabolic gene program and glucose utilization in human white adipocytes.
PMID:34799672
CD4+ effector T cells accelerate Alzheimer's disease in mice.
PMID:34798897
Comparison of carbohydrate ABC importers from Mycobacterium tuberculosis.
PMID:34798821
USH2A Mutation is Associated With Tumor Mutation Burden and Antitumor Immunity in Patients With Colon Adenocarcinoma.
PMID:34795697
A pan-cancer analysis revealing the role of TIGIT in tumor microenvironment.
PMID:34795387
De novo transcriptome and tissue specific expression analysis of genes associated with biosynthesis of secondary metabolites in Operculina turpethum (L.).
PMID:34795371
Role of FRG1 in predicting the overall survivability in cancers using multivariate based optimal model.
PMID:34795329
Construction of a single nucleotide variant score-related gene-based prognostic model in hepatocellular carcinoma: analysis of multi-independent databases and validation in vitro.
PMID:34794449
Small RNA sequencing reveals various microRNAs involved in piperine biosynthesis in black pepper (Piper nigrum L.).
PMID:34794378
Dichotomous effects of cellular expression of STAT3 on tumor growth of HNSCC.
PMID:34793974
Assessment of metabolic perturbations associated with exposure to phthalates among pregnant African American women.
PMID:34793805
Transcriptomic survey reveals multiple adaptation mechanisms in response to nitrogen deprivation in marine Porphyridium cruentum.
PMID:34793503
Technical note: overcoming host contamination in bovine vaginal metagenomic samples with nanopore adaptive sequencing.
PMID:34791313
Genetic architecture of orbital telorism.
PMID:34791242
The length scale of multivalent interactions is evolutionarily conserved in fungal and vertebrate phase-separating proteins.
PMID:34791214
Identification of biomarkers and ceRNA network in glioblastoma through bioinformatic analysis and evaluation of potential prognostic values.
PMID:34790767
Hypothalamic Transcriptome Analysis Reveals the Crucial MicroRNAs and mRNAs Affecting Litter Size in Goats.
PMID:34790713
Identification of Cross-Pathway Connections via Protein-Protein Interactions Linked to Altered States of Metabolic Enzymes in Cervical Cancer.
PMID:34790674
Topological Analysis of the Carbon-Concentrating CETCH Cycle and a Photorespiratory Bypass Reveals Boosted CO2-Sequestration by Plants.
PMID:34790651
Six mutator-derived lncRNA signature of genome instability for predicting the clinical outcome of colon cancer.
PMID:34790382
Transcriptome provides potential insights into how calcium affects the formation of stone cell in Pyrus.
PMID:34789145
Identification of Key Pathways and Genes in SARS-CoV-2 Infecting Human Intestines by Bioinformatics Analysis.
PMID:34787756
Identification and Validation of Autophagy-Related Genes as Potential Biomarkers and Therapeutic Targets in Atrial Fibrillation.
PMID:34785936
Comparative transcriptomic profiling of susceptible and resistant cultivars of pigeonpea demonstrates early molecular responses during Fusarium udum infection.
PMID:34785701
Apoptosis-associated speck-like protein containing a CARD regulates the growth of pancreatic ductal adenocarcinoma.
PMID:34785680
Heme auxotrophy in abundant aquatic microbial lineages.
PMID:34785591
Compendium of 530 metagenome-assembled bacterial and archaeal genomes from the polar Arctic Ocean.
PMID:34782724
Neuroprotective effects of long noncoding RNAs involved in ischemic postconditioning after ischemic stroke.
PMID:34782575
Hub microRNAs and genes in the development of atrial fibrillation identified by weighted gene co-expression network analysis.
PMID:34781940
Transcriptomic responses to drought stress in Polygonatum kingianum tuber.
PMID:34781887
Comprehensive analysis of expression, prognosis and immune infiltration for TIMPs in glioblastoma.
PMID:34781885
Linking Diabetes Mellitus with Alzheimer's Disease: Bioinformatics Analysis for the Potential Pathways and Characteristic Genes.
PMID:34779951
Chromosome-scale assembly reveals asymmetric paleo-subgenome evolution and targets for the acceleration of fungal resistance breeding in the nut crop, pecan.
PMID:34778752
Trends in biological data integration for the selection of enzymes and transcription factors related to cellulose and hemicellulose degradation in fungi.
PMID:34777932
Construction of the circRNA-miRNA-mRNA Regulatory Network of an Abdominal Aortic Aneurysm to Explore Its Potential Pathogenesis.
PMID:34777635
Novel Enzymes From the Red Sea Brine Pools: Current State and Potential.
PMID:34777282
Analysis of transcriptomic data sets supports the role of IL-6 in NETosis and immunothrombosis in severe COVID-19.
PMID:34775962
Whole-transcriptome sequencing reveals a vernalization-related ceRNA regulatory network in chinese cabbage (Brassica campestris L. ssp. pekinensis).
PMID:34773977
Systems pharmacology to reveal multi-scale mechanisms of traditional Chinese medicine for gastric cancer.
PMID:34773055
Identification of key genes and pathways associated with resting mast cells in meningioma.
PMID:34772393
Revealing the Molecular Mechanisms of Alzheimer's Disease Based on Network Analysis.
PMID:34768988
Association of microRNA-34a rs2666433 (A/G) Variant with Systemic Lupus Erythematosus in Female Patients: A Case-Control Study.
PMID:34768615
Single-cell transcriptomics identifies master regulators of neurodegeneration in SOD1 ALS iPSC-derived motor neurons.
PMID:34767750
RBS and Promoter Strengths Determine the Cell-Growth-Dependent Protein Mass Fractions and Their Optimal Synthesis Rates.
PMID:34767708
The Proteomic Signature of Recombinant Growth Hormone in Recreational Athletes.
PMID:34765854
Computational Studies of the Intestinal Host-Microbiota Interactome.
PMID:34765258
Factors that influence the quality of metabolomics data in in vitro cell toxicity studies: a systematic survey.
PMID:34764412
Spontaneous pulmonary emphysema in mice lacking all three nitric oxide synthase isoforms.
PMID:34764368
Chronic pathophysiological changes in the normal brain parenchyma caused by radiotherapy accelerate glioma progression.
PMID:34764346
Integrative Bioinformatics approaches to therapeutic gene target selection in various cancers for Nitroglycerin.
PMID:34764329
Myeloid Cell-Derived Oxidized Lipids and Regulation of the Tumor Microenvironment.
PMID:34764204
Multiomics study of a heterotardigrade, Echinisicus testudo, suggests the possibility of convergent evolution of abundant heat-soluble proteins in Tardigrada.
PMID:34763673
Integrated analyses of miRNA-mRNA expression profiles of ovaries reveal the crucial interaction networks that regulate the prolificacy of goats in the follicular phase.
PMID:34763659
An integrated workflow for enhanced taxonomic and functional coverage of the mouse fecal metaproteome.
PMID:34763597
DNA methylation-based classifier and gene expression signatures detect BRCAness in osteosarcoma.
PMID:34762643
Inhibition of the renin-angiotensin system causes concentric hypertrophy of renal arterioles in mice and humans.
PMID:34762601
Tlr2/4 Double Knockout Attenuates the Degeneration of Primary Auditory Neurons: Potential Mechanisms From Transcriptomic Perspectives.
PMID:34760891
Prioritisation of Candidate Genes Underpinning COVID-19 Host Genetic Traits Based on High-Resolution 3D Chromosomal Topology.
PMID:34759959
Pyrophosphate and Irreversibility in Evolution, or why PPi Is Not an Energy Currency and why Nature Chose Triphosphates.
PMID:34759911
Resolving the Microalgal Gene Landscape at the Strain Level: a Novel Hybrid Transcriptome of Emiliania huxleyi CCMP3266.
PMID:34757817
T2-DAG: a powerful test for differentially expressed gene pathways via graph-informed structural equation modeling.
PMID:34755844
Identification of genes and gene expression associated with dispersal capacity in the mountain pine beetle, Dendroctonus ponderosae Hopkins (Coleoptera: Curculionidae).
PMID:34754626
The effects of exosomes derived from trabecular meshwork cells on Schlemm's canal endothelial cells.
PMID:34754027
A dry immersion model of microgravity modulates platelet phenotype, miRNA signature, and circulating plasma protein biomarker profile.
PMID:34753989
Co-evolution based machine-learning for predicting functional interactions between human genes.
PMID:34753957
Pyroptosis-related gene mediated modification patterns and immune cell infiltration landscapes in cutaneous melanoma to aid immunotherapy.
PMID:34753832
Impact of spaceflight and artificial gravity on sulfur metabolism in mouse liver: sulfur metabolomic and transcriptomic analysis.
PMID:34750416
Restorative potential of (-)-epicatechin in a rat model of Gulf War illness muscle atrophy and fatigue.
PMID:34750405
Trait correlated expression combined with eQTL and ASE analyses identified novel candidate genes affecting intramuscular fat.
PMID:34749647
A genetic screen in macrophages identifies new regulators of IFNγ-inducible MHCII that contribute to T cell activation.
PMID:34747695
The Mucosally-Adherent Rectal Microbiota Contains Features Unique to Alcohol-Related Cirrhosis.
PMID:34747331
Study on the Mechanism of Liuwei Dihuang Pills in Treating Parkinson's Disease Based on Network Pharmacology.
PMID:34746302
Genome Instability and Long Noncoding RNA Reveal Biomarkers for Immunotherapy and Prognosis and Novel Competing Endogenous RNA Mechanism in Colon Adenocarcinoma.
PMID:34746134
Identification of Gene-Set Signature in Early-Stage Hepatocellular Carcinoma and Relevant Immune Characteristics.
PMID:34745960
A Novel Three-LncRNA Signature Predicting Tumor Recurrence in Nonfunctioning Pituitary Adenomas.
PMID:34745223
The Correlation between Gut Microbiota and Serum Metabolomic in Elderly Patients with Chronic Heart Failure.
PMID:34744513
Identification of the antibacterial mechanism of cryptotanshinone on methicillin-resistant Staphylococcus aureus using bioinformatics analysis.
PMID:34741111
The rumen microbiome inhibits methane formation through dietary choline supplementation.
PMID:34741032
MCLR-elicited hepatic fibrosis and carcinogenic gene expression changes persist in rats with diet-induced nonalcoholic steatohepatitis through a 4-week recovery period.
PMID:34740672
Integrated Single-Cell Bioinformatics Analysis Reveals Intrinsic and Extrinsic Biological Characteristics of Hematopoietic Stem Cell Aging.
PMID:34737765
High-quality reference genome sequences of two coconut cultivars provide insights into evolution of monocot chromosomes and differentiation of fiber content and plant height.
PMID:34736486
Genomic and epigenomic adaptation in SP-R210 (Myo18A) isoform-deficient macrophages.
PMID:34735924
A novel strategy for combination of clofarabine and pictilisib is synergistic in gastric cancer.
PMID:34735897
A novel immune-related ceRNA network that predicts prognosis and immunotherapy response in lung adenocarcinoma.
PMID:34734036
An integrated analysis of DNA promoter methylation, microRNA regulation, and gene expression in gastric adenocarcinoma.
PMID:34733966
Comparison of critical biomarkers in 2 erectile dysfunction models based on GEO and NOS-cGMP-PDE5 pathway.
PMID:34731136
The Overexpression of Phasin and Regulator Genes Promoting the Synthesis of Polyhydroxybutyrate in Cupriavidus necator H16 under Nonstress Conditions.
PMID:34731058
Precise pathological classification of non-small cell lung adenocarcinoma and squamous carcinoma based on an integrated platform of targeted metabolome and lipidome.
PMID:34729658
Proteogenomic discovery of sORF-encoded peptides associated with bacterial virulence in Yersinia pestis.
PMID:34728737
Integrative genome-wide analysis of dopaminergic neuron-specific PARIS expression in Drosophila dissects recognition of multiple PPAR-γ associated gene regulation.
PMID:34728675
Genome-Wide Identification of Tomato Xylem Sap Fitness Factors for Three Plant-Pathogenic Ralstonia Species.
PMID:34726495
Interactions of the Intracellular Bacterium Cardinium with Its Host, the House Dust Mite Dermatophagoides farinae, Based on Gene Expression Data.
PMID:34726490
Transcriptome and Exome Analyses of Hepatocellular Carcinoma Reveal Patterns to Predict Cancer Recurrence in Liver Transplant Patients.
PMID:34725972
Venatorbacter cucullus gen. nov sp. nov a novel bacterial predator.
PMID:34725408
Nitecap: An Exploratory Circadian Analysis Web Application.
PMID:34724846
A gap-filling algorithm for prediction of metabolic interactions in microbial communities.
PMID:34723959
DCcov: Repositioning of drugs and drug combinations for SARS-CoV-2 infected lung through constraint-based modeling.
PMID:34723158
Local delivery of FTY720 induces neutrophil activation through chemokine signaling in an oronasal fistula model.
PMID:34722855
Distinct Mitochondrial Remodeling During Mesoderm Differentiation in a Human-Based Stem Cell Model.
PMID:34722525
Serum Anti-14-3-3 Zeta Autoantibody as a Biomarker for Predicting Hepatocarcinogenesis.
PMID:34722278
Migration effects on the intestinal microbiota of Tibetans.
PMID:34721954
Metagenomic Analysis Reveals Neisseria bacilliformis Variation in the Early Childhood Caries Plaque Microbiome.
PMID:34721624
Viral Strain-Specific Activation of Pathogen-Associated Molecular Pattern-Triggered Immunity Enhances Symptom Severity in Broad Bean Wilt Virus 2 Infection.
PMID:34721473
Transcriptomic and Network Meta-Analysis of Frontotemporal Dementias.
PMID:34720873
A Beginner's Guide to the COBRA Toolbox.
PMID:34719002
Curating COBRA Models of Microbial Metabolism.
PMID:34719001
EWAS Open Platform: integrated data, knowledge and toolkit for epigenome-wide association study.
PMID:34718752
Maternal methionine supplementation during gestation alters alternative splicing and DNA methylation in bovine skeletal muscle.
PMID:34717556
PlantPathMarks (PPMdb): an interactive hub for pathways-based markers in plant genomes.
PMID:34716373
Determining oncogenic patterns and cancer predisposition through the transcriptomic profile in Mitchell-Riley syndrome with heterotopic gastric mucosa and duodenal atresia: a case report.
PMID:34715892
GFICLEE: ultrafast tree-based phylogenetic profile method inferring gene function at the genomic-wide level.
PMID:34715785
Exploration of the anti-insomnia mechanism of Ganoderma by central-peripheral multi-level interaction network analysis.
PMID:34715778
The Eco-Exposome Concept: Supporting an Integrated Assessment of Mixtures of Environmental Chemicals.
PMID:34714945
The landscape of DNA methylation in asthma: a data mining and validation.
PMID:34714718
Responses of Escherichia coli and Listeria monocytogenes to ozone treatment on non-host tomato: Efficacy of intervention and evidence of induced acclimation.
PMID:34710139
Characterizing the breast cancer lipidome and its interaction with the tissue microbiota.
PMID:34707244
Nutritional restriction during the peri-conceptional period alters the myometrial transcriptome during the peri-implantation period.
PMID:34707153
Potential value and chemical characterization of gut microbiota derived nitrogen containing metabolites in feces from Periplaneta americana (L.) at different growth stages.
PMID:34707100
RNA-Seq analysis in giant pandas reveals the differential expression of multiple genes involved in cataract formation.
PMID:34706646
ANAT 3.0: a framework for elucidating functional protein subnetworks using graph-theoretic and machine learning approaches.
PMID:34706638
Natural products for infectious microbes and diseases: an overview of sources, compounds, and chemical diversities.
PMID:34705221
Fecal Microbiota Transplantation Increases Colonic IL-25 and Dampens Tissue Inflammation in Patients with Recurrent Clostridioides difficile.
PMID:34704776
Protocol for using NoBadWordsCombiner to merge and minimize "bad words" from BLAST hits against multiple eukaryotic gene annotation databases.
PMID:34704076
Exploring biological basis of Syndrome differentiation in coronary heart disease patients with two distinct Syndromes by integrated multi-omics and network pharmacology strategy.
PMID:34702323
A Markov random field model for network-based differential expression analysis of single-cell RNA-seq data.
PMID:34702190
Comparative genomics reveals molecular mechanisms underlying health and reproduction in cryptorchid mammals.
PMID:34702182
Circadian miR-449c-5p regulates uterine Ca2+ transport during eggshell calcification in chickens.
PMID:34702171
Influence of formic acid treatment on the proteome of the ectoparasite Varroa destructor.
PMID:34699527
Discrimination of Bacterial Community Structures among Healthy, Gingivitis, and Periodontitis Statuses through Integrated Metatranscriptomic and Network Analyses.
PMID:34698525
Elucidate multidimensionality of type 1 diabetes mellitus heterogeneity by multifaceted information.
PMID:34697343
Physiologic biomechanics enhance reproducible contractile development in a stem cell derived cardiac muscle platform.
PMID:34697315
Prioritization of Diagnostic and Prognostic Biomarkers for Lupus Nephritis Based on Integrated Bioinformatics Analyses.
PMID:34692653
Convergent adaptation of the genomes of woody plants at the land-sea interface.
PMID:34692119
Rapid phenotypic evolution with shallow genomic differentiation during early stages of high elevation adaptation in Eurasian Tree Sparrows.
PMID:34692022
Optical Coherence Tomography Angiography Characteristics Serve as Retinal Vein Occlusion Therapeutic Biomarkers for Dexamethasone Intravitreal Implant.
PMID:34691285
Transcriptome and Metabolome Comparison of Smooth and Rough Citrus limon L. Peels Grown on Same Trees and Harvested in Different Seasons.
PMID:34691126
New Arsenite Oxidase Gene (aioA) PCR Primers for Assessing Arsenite-Oxidizer Diversity in the Environment Using High-Throughput Sequencing.
PMID:34690945
TPSC: a module detection method based on topology potential and spectral clustering in weighted networks and its application in gene co-expression module discovery.
PMID:34689740
Identification of four novel QTL linked to the metabolic syndrome in the Berlin Fat Mouse.
PMID:34689180
Identification of C3 and FN1 as potential biomarkers associated with progression and prognosis for clear cell renal cell carcinoma.
PMID:34688260
Altered gene expression in slc4a11-/- mouse cornea highlights SLC4A11 roles.
PMID:34686736
Multi-omics analysis of m6A modification-related patterns based on m6A regulators and tumor microenvironment infiltration in lung adenocarcinoma.
PMID:34686691
A human multi-lineage hepatic organoid model for liver fibrosis.
PMID:34686668
Microarray profile analysis identifies ETS1 as potential biomarker regulated by miR-23b and modulates TCF4 in gastric cancer.
PMID:34686186
Whole genome sequencing and comparative genomic analyses of Planococcus alpniumensis MSAK28401T, a new species isolated from Antarctic krill.
PMID:34686131
The Semi-Supervised Strategy of Machine Learning on the Gene Family Diversity to Unravel Resveratrol Synthesis.
PMID:34685867
Lineage-Selective Disturbance of Early Human Hematopoietic Progenitor Cell Differentiation by the Commonly Used Plasticizer Di-2-ethylhexyl Phthalate via Reactive Oxygen Species: Fatty Acid Oxidation Makes the Difference.
PMID:34685682
Ambient Air Pollution Shapes Bacterial and Fungal Ivy Leaf Communities.
PMID:34683409
Precise Characterization of Genetic Interactions in Cancer via Molecular Network Refining Processes.
PMID:34681774
Stage Specificity, the Dynamic Regulators and the Unique Orchid Arundina graminifolia.
PMID:34681593
Identification of Five Hub Genes as Key Prognostic Biomarkers in Liver Cancer via Integrated Bioinformatics Analysis.
PMID:34681056
Transcriptome Profiling of Maize (Zea mays L.) Leaves Reveals Key Cold-Responsive Genes, Transcription Factors, and Metabolic Pathways Regulating Cold Stress Tolerance at the Seedling Stage.
PMID:34681032
Methanogenesis and Salt Tolerance Genes of a Novel Halophilic Methanosarcinaceae Metagenome-Assembled Genome from a Former Solar Saltern.
PMID:34681003
Modulation of Global Gene Expression by Aneuploidy and CNV of Dosage Sensitive Regulatory Genes.
PMID:34681000
Silver: Forging almost Gold Standard Datasets.
PMID:34680918
Exploring Semi-Quantitative Metagenomic Studies Using Oxford Nanopore Sequencing: A Computational and Experimental Protocol.
PMID:34680891
Trends in the Application of "Omics" to Ecotoxicology and Stress Ecology.
PMID:34680873
Expression of Cytokine-Coding Genes BMP8B, LEFTY1 and INSL5 Could Distinguish between Ulcerative Colitis and Crohn's Disease.
PMID:34680872
De Novo Genome Assembly of Chinese Plateau Honeybee Unravels Intraspecies Genetic Diversity in the Eastern Honeybee, Apis cerana.
PMID:34680661
A Systems Approach to Interrogate Gene Expression Patterns in African American Men Presenting with Clinically Localized Prostate Cancer.
PMID:34680291
PaIRKAT: A pathway integrated regression-based kernel association test with applications to metabolomics and COPD phenotypes.
PMID:34679079
Pathways and microbiome modifications related to surgery and enterocolitis in Hirschsprung disease.
PMID:34677676
Metabolomics Reveals That Bisphenol Pollutants Impair Protein Synthesis-Related Pathways in Daphnia magna.
PMID:34677381
Metabolomics and Inflammatory Mediator Profiling for the Differentiation of Life-Threatening and Non-Severe Appendicitis in the Pediatric Population.
PMID:34677379
Yeast metabolic innovations emerged via expanded metabolic network and gene positive selection.
PMID:34676984
Genome-wide distribution of 5hmC in the dental pulp of mouse molars and incisors.
PMID:34676418
Cell Wall Proteomics Reveal Phenotypic Adaption of Drug-Resistant Mycobacterium smegmatis to Subinhibitory Rifampicin Exposure.
PMID:34676224
The nomogram based on the 6-lncRNA model can promote the prognosis prediction of patients with breast invasive carcinoma.
PMID:34675301
Enhancement of Campylobacter hepaticus culturing to facilitate downstream applications.
PMID:34675257
An Emiliania huxleyi pan-transcriptome reveals basal strain specificity in gene expression patterns.
PMID:34675226
Analysis of potential regulatory LncRNAs and CircRNAs in the oxidative myofiber and glycolytic myofiber of chickens.
PMID:34675224
Association between genetic variants of the cholinergic system and postoperative delirium and cognitive dysfunction in elderly patients.
PMID:34674705
Starch branching enzymes as putative determinants of postharvest quality in horticultural crops.
PMID:34674662
Identification of Key Differentially Methylated/Expressed Genes and Pathways for Ovarian Endometriosis by Bioinformatics Analysis.
PMID:34671938
An Atypical Autoinflammatory Disease Due to an LRR Domain NLRP3 Mutation Enhancing Binding to NEK7.
PMID:34671876
Pan-cancer analysis of pathway-based gene expression pattern at the individual level reveals biomarkers of clinical prognosis.
PMID:34671755
Genomic Changes and Genetic Divergence of Vibrio alginolyticus Under Phage Infection Stress Revealed by Whole-Genome Sequencing and Resequencing.
PMID:34671325
Reduced expression of OXPHOS and DNA damage genes is linked to protection from microvascular complications in long-term type 1 diabetes: the PROLONG study.
PMID:34671071
Investigation of the transcriptomic response in Atlantic salmon (Salmo salar) gill exposed to Paramoeba perurans during early onset of disease.
PMID:34667245
Pseudomonas aeruginosa transcriptome adaptations from colonization to biofilm infection of skin wounds.
PMID:34667187
Deep learning allows genome-scale prediction of Michaelis constants from structural features.
PMID:34665809
Construction of a 5 immune-related lncRNA-based prognostic model of NSCLC via bioinformatics.
PMID:34664861
Microarray analysis of hub genes and pathways in damaged cartilage tissues of knee.
PMID:34664844
Investigation on the mechanisms of guiqi huoxue capsule for treating cervical spondylosis based on network pharmacology and molecular docking.
PMID:34664825
The structure of behavioral variation within a genotype.
PMID:34664550
Extracellular calcium alters calcium-sensing receptor network integrating intracellular calcium-signaling and related key pathway.
PMID:34663830
Functional glyco-metagenomics elucidates the role of glycan-related genes in environments.
PMID:34663219
Pleiotropic Effects of the P5-Type ATPase SpfA on Stress Response Networks Contribute to Virulence in the Pathogenic Mold Aspergillus fumigatus.
PMID:34663092
Modular Evolution of the Drosophila Metabolome.
PMID:34662414
Qualitative lysine crotonylome analysis in the ovarian tissue of Harmonia axyridis (Pallas).
PMID:34662345
Identification of a prognostic chemoresistance-related gene signature associated with immune microenvironment in breast cancer.
PMID:34661511
DNA Repair and Immune Response Pathways Are Deregulated in Melanocyte-Keratinocyte Co-cultures Derived From the Healthy Skin of Familial Melanoma Patients.
PMID:34660619
Identification of Novel Biomarkers Related to Lung Squamous Cell Carcinoma Using Integrated Bioinformatics Analysis.
PMID:34659450
Transcriptome Profiling Reveals Important Transcription Factors and Biological Processes in Skin Regeneration Mediated by Mechanical Stretch.
PMID:34659370
Whole-Genome Sequencing and Genome-Wide Studies of Spiny Head Croaker (Collichthys lucidus) Reveals Potential Insights for Well-Developed Otoliths in the Family Sciaenidae.
PMID:34659355
Genome-Based Taxonomic Rearrangement of the Order Geobacterales Including the Description of Geomonas azotofigens sp. nov. and Geomonas diazotrophica sp. nov.
PMID:34659166
Sex-Specific Cross Tissue Meta-Analysis Identifies Immune Dysregulation in Women With Alzheimer's Disease.
PMID:34658838
Non-coding RNA in raw and commercially processed milk and putative targets related to growth and immune-response.
PMID:34657595
Deep post-GWAS analysis identifies potential risk genes and risk variants for Alzheimer's disease, providing new insights into its disease mechanisms.
PMID:34654853
Chromosome-scale assembly and high-density genetic map of the yellow drum, Nibea albiflora.
PMID:34654820
Effect of the spatial-temporal specific theca cell Cyp17 overexpression on the reproductive phenotype of the novel TC17 mouse.
PMID:34654452
A comparative analysis of differentially expressed mRNAs, miRNAs and circRNAs provides insights into the key genes involved in the high-altitude adaptation of yaks.
PMID:34654374
Performance of Multiple Metagenomics Pipelines in Understanding Microbial Diversity of a Low-Biomass Spacecraft Assembly Facility.
PMID:34650522
Large-scale k-mer-based analysis of the informational properties of genomes, comparative genomics and taxonomy.
PMID:34648558
Tryptophan metabolism is inversely regulated in the tumor and blood of patients with glioblastoma.
PMID:34646367
The cyclin dependent kinase inhibitor Roscovitine prevents diet-induced metabolic disruption in obese mice.
PMID:34645915
Untargeted metabolomics reveals sex-specific differences in lipid metabolism of adult rats exposed to dexamethasone in utero.
PMID:34645877
Physiological responses and transcriptomic changes reveal the mechanisms underlying adaptation of Stylosanthes guianensis to phosphorus deficiency.
PMID:34645406
Clarifying the molecular mechanism of tomentosin‑induced antiproliferative and proapoptotic effects in human multiple myeloma via gene expression profile and genetic interaction network analysis.
PMID:34643251
A meta-analysis study of the robustness and universality of gut microbiome-metabolome associations.
PMID:34641974
Neutrophil Pathways of Inflammation Characterize the Blood Transcriptomic Signature of Patients with Psoriasis and Cardiovascular Disease.
PMID:34639156
Impact of the Pd2Spm (Spermine) Complex on the Metabolism of Triple-Negative Breast Cancer Tumors of a Xenograft Mouse Model.
PMID:34639114
A Secreted Chorismate Mutase from Xanthomonas arboricola pv. juglandis Attenuates Virulence and Walnut Blight Symptoms.
PMID:34638715
Risk Prediction of Cardiovascular Events by Exploration of Molecular Data with Explainable Artificial Intelligence.
PMID:34638627
Metagenomic analysis provides functional insights into seasonal change of a non-cyanobacterial prokaryotic community in temperate coastal waters.
PMID:34637433
Exploring the Meta-regulon of the CRP/FNR Family of Global Transcriptional Regulators in a Partial-Nitritation Anammox Microbiome.
PMID:34636676
Transcriptomics Reveals the Putative Mycoparasitic Strategy of the Mushroom Entoloma abortivum on Species of the Mushroom Genus Armillaria.
PMID:34636668
Identification of loci associated with pathological outcomes in Holstein cattle infected with Mycobacterium avium subsp. paratuberculosis using whole-genome sequence data.
PMID:34635747
Anthrahydroquinone-2-6-disulfonate is a novel, powerful antidote for paraquat poisoning.
PMID:34635711
Three chromosome-level duck genome assemblies provide insights into genomic variation during domestication.
PMID:34635656
Integrated analysis of mRNA-seq and miRNA-seq reveals the advantage of polyploid Solidago canadensis in sexual reproduction.
PMID:34635057
Metabolic gene regulation by Drosophila GATA transcription factor Grain.
PMID:34634038
Reconstructing Boolean network ensembles from single-cell data for unraveling dynamics in the aging of human hematopoietic stem cells.
PMID:34630946
The Biocontrol and Plant Growth-Promoting Properties of Streptomyces alfalfae XN-04 Revealed by Functional and Genomic Analysis.
PMID:34630371
Serum Metabolic Profiles of Chinese Women With Perimenopausal Obesity Explored by the Untargeted Metabolomics Approach.
PMID:34630316
p53-dependent induction of P2X7 on hematopoietic stem and progenitor cells regulates hematopoietic response to genotoxic stress.
PMID:34625535
Development of a Toll-Like Receptor-Based Gene Signature That Can Predict Prognosis, Tumor Microenvironment, and Chemotherapy Response for Hepatocellular Carcinoma.
PMID:34621787
Identification of biomarkers of brown adipose tissue aging highlights the role of dysfunctional energy and nucleotide metabolism pathways.
PMID:34620947
Applying PICRUSt and 16S rRNA functional characterisation to predicting co-digestion strategies of various animal manures for biogas production.
PMID:34620937
Western and non-western gut microbiomes reveal new roles of Prevotella in carbohydrate metabolism and mouth-gut axis.
PMID:34620880
A protocol for dynamic model calibration.
PMID:34619769
Tumor-propagating side population cells are a dynamic subpopulation in undifferentiated pleomorphic sarcoma.
PMID:34618689
Metabolic network-based identification of plasma markers for non-small cell lung cancer.
PMID:34617154
Novel ACE2 protein interactions relevant to COVID-19 predicted by evolutionary rate correlations.
PMID:34616619
Scoparone inhibits pancreatic cancer through PI3K/Akt signaling pathway.
PMID:34616521
Lipidomic approaches to dissect dysregulated lipid metabolism in kidney disease.
PMID:34616096
Inhibition of Vascular Growth by Modulation of the Anandamide/Fatty Acid Amide Hydrolase Axis.
PMID:34615374
CyanoOmicsDB: an integrated omics database for functional genomic analysis of cyanobacteria.
PMID:34614159
A metric for evaluating biological information in gene sets and its application to identify co-expressed gene clusters in PBMC.
PMID:34613979
Overexpression of EWSR1 (Ewing sarcoma breakpoint region 1/EWS RNA binding protein 1) predicts poor survival in patients with hepatocellular carcinoma.
PMID:34612781
Targeting the miRNA-155/TNFSF10 network restrains inflammatory response in the retina in a mouse model of Alzheimer's disease.
PMID:34611142
Novel Drivers of Virulence in Clostridioides difficile Identified via Context-Specific Metabolic Network Analysis.
PMID:34609164
Proteomics changes after negative pressure wound therapy in diabetic foot ulcers.
PMID:34608502
A Chinese host genetic study discovered IFNs and causality of laboratory traits on COVID-19 severity.
PMID:34608450
Potential roles of 1,5-anhydro-D-fructose in modulating gut microbiome in mice.
PMID:34608200
A Computational Framework to Identify Transcriptional and Network Differences between Hepatocellular Carcinoma and Normal Liver Tissue and Their Applications in Repositioning Drugs.
PMID:34604388
Transcriptomic Analysis Reveals a Sex-Dimorphic Influence of GAT-2 on Murine Liver Function.
PMID:34604287
Effects of Helicobacter pylori Infection on the Oral Microbiota of Reflux Esophagitis Patients.
PMID:34604113
Identification of LINC00173 in Myasthenia Gravis by Integration Analysis of Aberrantly Methylated- Differentially Expressed Genes and ceRNA Networks.
PMID:34603387
Interferon-inducible protein, IFIX, has tumor-suppressive effects in oral squamous cell carcinoma.
PMID:34599264
Toward understanding of the methoxylated flavonoid biosynthesis pathway in Dracocephalum kotschyi Boiss.
PMID:34599246
Dietary, Cultural, and Pathogens-Related Selective Pressures Shaped Differential Adaptive Evolution among Native Mexican Populations.
PMID:34597392
Using a Two-Sample Mendelian Randomization Method in Assessing the Causal Relationships Between Human Blood Metabolites and Heart Failure.
PMID:34595216
X-Ray Causes mRNA Transcripts Change to Enhance Orai2-Mediated Ca2+ Influx in Rat Brain Microvascular Endothelial Cells.
PMID:34595206
Heme Oxygenase-1 at the Nexus of Endothelial Cell Fate Decision Under Oxidative Stress.
PMID:34595164
Comparative Immunogenomics of Canine Natural Killer Cells as Immunotherapy Target.
PMID:34594320
Repurposing haloperidol for the treatment of rheumatoid arthritis: an integrative approach using data mining techniques.
PMID:34589142
Insights into the gut bacterial communities of spider from wild with no evidence of phylosymbiosis.
PMID:34588907
Tanshinone IIA affects the malignant growth of Cholangiocarcinoma cells by inhibiting the PI3K-Akt-mTOR pathway.
PMID:34588580
Global identification of long non-coding RNAs involved in the induction of spinach flowering.
PMID:34587906
Ecological Dichotomies Arise in Microbial Communities Due to Mixing of Deep Hydrothermal Waters and Atmospheric Gas in a Circumneutral Hot Spring.
PMID:34586901
Whole-genome assembly of Ganoderma leucocontextum (Ganodermataceae, Fungi) discovered from the Tibetan Plateau of China.
PMID:34586388
RNA-RNA interactions between SARS-CoV-2 and host benefit viral development and evolution during COVID-19 infection.
PMID:34585235
Identifying metabolic alterations in newly diagnosed small cell lung cancer patients.
PMID:34585134
The genome of the naturally evolved obesity-prone Ossabaw miniature pig.
PMID:34585119
Phagocytosis by stroma confounds coculture studies.
PMID:34585113
Oxysterol binding protein-like 3 (OSBPL3) is a novel driver gene that promotes tumor growth in part through R-Ras/Akt signaling in gastric cancer.
PMID:34584127
Exploration of the lactation function of protein phosphorylation sites in goat mammary tissues by phosphoproteome analysis.
PMID:34583635
Molecular regulation of anthocyanin discoloration under water stress and high solar irradiance in pluckable shoots of purple tea cultivar.
PMID:34581909
Identification of Vital Hub Genes and Potential Molecular Pathways of Dermatomyositis by Bioinformatics Analysis.
PMID:34580642
Short-term transcriptomic response to plasma membrane injury.
PMID:34580330
A New Murine Liver Fibrosis Model Induced by Polyhexamethylene Guanidine-Phosphate.
PMID:34580237
Wnt pathway-related three-mRNA clinical outcome signature in bladder urothelial carcinoma: computational biology and experimental analyses.
PMID:34579753
Predicting metabolic pathway membership with deep neural networks by integrating sequential and ontology information.
PMID:34579673
Morphological, physiological, and transcriptional responses to low nitrogen stress in Populus deltoides Marsh. clones with contrasting nitrogen use efficiency.
PMID:34579659
Recombinant Antigen of Type 2 Porcine Reproductive and Respiratory Syndrome Virus (PRRSV-2) Promotes M1 Repolarization of Porcine Alveolar Macrophages and Th1 Type Response.
PMID:34579246
Association Study among Comethylation Modules, Genetic Polymorphisms and Clinical Features in Mexican Teenagers with Eating Disorders: Preliminary Results.
PMID:34579086
Plasma Metabolome Profiling by High-Performance Chemical Isotope-Labelling LC-MS after Acute and Medium-Term Intervention with Golden Berry Fruit (Physalis peruviana L.), Confirming Its Impact on Insulin-Associated Signaling Pathways.
PMID:34579001
The MAPK/ERK Pathway and the Role of DUSP1 in JCPyV Infection of Primary Astrocytes.
PMID:34578413
NetCom: A Network-Based Tool for Predicting Metabolic Activities of Microbial Communities Based on Interpretation of Metagenomics Data.
PMID:34576734
Genome-Resolved Meta-Analysis of the Microbiome in Oil Reservoirs Worldwide.
PMID:34576708
Personalised Medicine for Colorectal Cancer Using Mechanism-Based Machine Learning Models.
PMID:34576133
WGCNA Identifies Translational and Proteasome-Ubiquitin Dysfunction in Rett Syndrome.
PMID:34576118
Molecular Classification Models for Triple Negative Breast Cancer Subtype Using Machine Learning.
PMID:34575658
Study of Triticum aestivum Resistome in Response to Wheat dwarf India Virus Infection.
PMID:34575104
Improved Large-Scale Homology Search by Two-Step Seed Search Using Multiple Reduced Amino Acid Alphabets.
PMID:34573438
Years of Schooling Could Reduce Epigenetic Aging: A Study of a Mexican Cohort.
PMID:34573390
Identification of Long Non-Coding RNAs Involved in Porcine Fat Deposition Using Two High-Throughput Sequencing Methods.
PMID:34573356
HMGB1 Protein Interactions in Prostate and Ovary Cancer Models Reveal Links to RNA Processing and Ribosome Biogenesis through NuRD, THOC and Septin Complexes.
PMID:34572914
Identifying GPSM Family Members as Potential Biomarkers in Breast Cancer: A Comprehensive Bioinformatics Analysis.
PMID:34572330
Single-cell RNA Sequencing Reveals Sexually Dimorphic Transcriptome and Type 2 Diabetes Genes in Mouse Islet β Cells.
PMID:34571259
A biallelic SNIP1 Amish founder variant causes a recognizable neurodevelopmental disorder.
PMID:34570759
A highly multiplexed quantitative phosphosite assay for biology and preclinical studies.
PMID:34569154
Changes in the Gut Microbiome Contribute to the Development of Behcet's Disease via Adjuvant Effects.
PMID:34568329
Mammary Tumorigenesis and Metabolome in Male Adipose Specific Monocyte Chemotactic Protein-1 Deficient MMTV-PyMT Mice Fed a High-Fat Diet.
PMID:34568008
Identification of a miRNA-mRNA Regulatory Networks in Placental Tissue Associated With Tibetan High Altitude Adaptation.
PMID:34567059
CD49a Identifies Polyfunctional Memory CD8 T Cell Subsets that Persist in the Lungs After Influenza Infection.
PMID:34566986
Systems-Level Proteomics Evaluation of Microglia Response to Tumor-Supportive Anti-Inflammatory Cytokines.
PMID:34566949
VicPred: A Vibrio cholerae Genotype Prediction Tool.
PMID:34566903
Gene clusters based on OLIG2 and CD276 could distinguish molecular profiling in glioblastoma.
PMID:34565408
Glycolysis related gene expression signature in predicting prognosis of laryngeal squamous cell carcinoma.
PMID:34565301
Phylogenomics, CAZyome and core secondary metabolome of Streptomyces albus species.
PMID:34564766
An Extensive Metabolomics Workflow to Discover Cardiotoxin-Induced Molecular Perturbations in Microtissues.
PMID:34564460
Profiles of microRNA in aqueous humor of normal tension glaucoma patients using RNA sequencing.
PMID:34561506
Differentially expressed genes reflect disease-induced rather than disease-causing changes in the transcriptome.
PMID:34561431
Discovery of ancestral L-ornithine and L-lysine decarboxylases reveals parallel, pseudoconvergent evolution of polyamine biosynthesis.
PMID:34560100
Identification of a Novel Ferroptosis-Related Gene Prognostic Signature in Bladder Cancer.
PMID:34557413
Malignant Tumor Purity Reveals the Driven and Prognostic Role of CD3E in Low-Grade Glioma Microenvironment.
PMID:34557404
Identification of Key Candidate Genes and Chemical Perturbagens in Diabetic Kidney Disease Using Integrated Bioinformatics Analysis.
PMID:34557161
Network neighbors of viral targets and differentially expressed genes in COVID-19 are drug target candidates.
PMID:34556735
Proteomics reveals the effects of drought stress on the kernel development and starch formation of waxy maize.
PMID:34556041
Effect of food source availability in the salivary gland transcriptome of the unique burying beetle Nicrophorus pustulatus (Coleoptera: Silphidae).
PMID:34555059
Examination of Gene Loss in the DNA Mismatch Repair Pathway and Its Mutational Consequences in a Fungal Phylum.
PMID:34554246
MEK-inhibitor-mediated rescue of skeletal myopathy caused by activating Hras mutation in a Costello syndrome mouse model.
PMID:34553752
A High-Throughput Method to Analyze the Interaction Proteins With p22 Protein of African Swine Fever Virus In Vitro.
PMID:34552974
Mass spectrometry-based metabolomics in microbiome investigations.
PMID:34552265
Primate-specific stress-induced transcription factor POU2F1Z protects human neuronal cells from stress.
PMID:34552146
Proliferative diabetic retinopathy transcriptomes reveal angiogenesis, anti-angiogenic therapy escape mechanisms, fibrosis and lymphatic involvement.
PMID:34552123
Deep GONet: self-explainable deep neural network based on Gene Ontology for phenotype prediction from gene expression data.
PMID:34551707
Microbiota composition and intestinal integrity remain unaltered after the inclusion of hydrolysed Nannochloropsis gaditana in Sparus aurata diet.
PMID:34548549
Caveolin-1 and Sox-2 are predictive biomarkers of cetuximab response in head and neck cancer.
PMID:34546978
Genomic Stability and Genetic Defense Systems in Dolosigranulum pigrum, a Candidate Beneficial Bacterium from the Human Microbiome.
PMID:34546072
Screening and Bioinformatics Analysis of Competitive Endogenous RNA Regulatory Network --Related to Circular RNA in Breast Cancer.
PMID:34545330
Non-invasive diagnostic tool for Parkinson's disease by sebum RNA profile with machine learning.
PMID:34545158
The molecular interplay of the establishment of an infection - gene expression of Diaphorina citri gut and Candidatus Liberibacter asiaticus.
PMID:34544390
A Rickettsiella Endosymbiont Is a Potential Source of Essential B-Vitamins for the Poultry Red Mite, Dermanyssus gallinae.
PMID:34539600
DELEAT: gene essentiality prediction and deletion design for bacterial genome reduction.
PMID:34537011
GenNet framework: interpretable deep learning for predicting phenotypes from genetic data.
PMID:34535759
PlantGSAD: a comprehensive gene set annotation database for plant species.
PMID:34534340
Characterization of fecal metabolome changes in patients with obstructive sleep apnea.
PMID:34534066
Whole genome sequencing of Enterobacter mori, an emerging pathogen of kiwifruit and the potential genetic adaptation to pathogenic lifestyle.
PMID:34533621
Identification of Novel Choroidal Neovascularization-Related Genes Using Laplacian Heat Diffusion Algorithm.
PMID:34532497
Transcriptome analysis reveals the mechanism of stromal cell-derived factor-1 and exendin-4 synergistically promoted periodontal ligament stem cells osteogenic differentiation.
PMID:34532163
Identification of Novel Gene Signatures using Next-Generation Sequencing Data from COVID-19 Infection Models: Focus on Neuro-COVID and Potential Therapeutics.
PMID:34531741
Protective mechanism of Erigeron breviscapus injection on blood-brain barrier injury induced by cerebral ischemia in rats.
PMID:34531475
TFTenricher: a python toolbox for annotation enrichment analysis of transcription factor target genes.
PMID:34530727
Identification of key genes and immune infiltration modulated by CPAP in obstructive sleep apnea by integrated bioinformatics analysis.
PMID:34529670
Transcriptome analysis of two Pogostemon cablin chemotypes reveals genes related to patchouli alcohol biosynthesis.
PMID:34527441
Integrative Analysis of the Roles of lncRNAs and mRNAs in Itaconate-Mediated Protection Against Liver Ischemia-Reperfusion Injury in Mice.
PMID:34526799
Empagliflozin maintains capillarization and improves cardiac function in a murine model of left ventricular pressure overload.
PMID:34526601
Disease-induced changes in plant microbiome assembly and functional adaptation.
PMID:34526096
ARHGAP4-SEPT2-SEPT9 complex enables both up- and down-modulation of integrin-mediated focal adhesions, cell migration, and invasion.
PMID:34524873
Proteogenomic Analysis Provides Novel Insight into Genome Annotation and Nitrogen Metabolism in Nostoc sp. PCC 7120.
PMID:34523988
Aspects of the Neurospora crassa Sulfur Starvation Response Are Revealed by Transcriptional Profiling and DNA Affinity Purification Sequencing.
PMID:34523983
Bioinformatics analysis identified shared differentially expressed genes as potential biomarkers for Hashimoto's thyroiditis-related papillary thyroid cancer.
PMID:34522174
Characterization of m6A-Related Genes Landscape in Skin Cutaneous Melanoma to Aid Immunotherapy and Assess Prognosis.
PMID:34522131
Metabolic effect of drought stress on the leaves of young oil palm (Elaeis guineensis) plants using UHPLC-MS and multivariate analysis.
PMID:34521943
Analysis of weighted gene co-expression network of triterpenoid-related transcriptome characteristics from different strains of Wolfiporia cocos.
PMID:34521885
Immunoregulatory mechanism studies of ginseng leaves on lung cancer based on network pharmacology and molecular docking.
PMID:34521875
E2F transcription factor 1 (E2F1) promotes the transforming growth factor TGF-β1 induced human cardiac fibroblasts differentiation through promoting the transcription of CCNE2 gene.
PMID:34521301
Screening Strategies for Biosurfactant Discovery.
PMID:34518910
Prokaryotic viruses impact functional microorganisms in nutrient removal and carbon cycle in wastewater treatment plants.
PMID:34518545
FLT3L Release by Natural Killer Cells Enhances Response to Radioimmunotherapy in Preclinical Models of HNSCC.
PMID:34518311
Arsenic exposure and human blood DNA methylation and hydroxymethylation profiles in two diverse populations from Bangladesh and Spain.
PMID:34516978
Podocyte-specific KLF4 is required to maintain parietal epithelial cell quiescence in the kidney.
PMID:34516901
Identification of hsa_circ_0002024 as a prognostic competing endogenous RNA (ceRNA) through the hsa_miR_129-5p/Anti-Silencing Function 1B Histone Chaperone (ASF1B) axis in renal cell carcinoma.
PMID:34516341
Oral Phenotype and Salivary Microbiome of Individuals With Papillon-Lefèvre Syndrome.
PMID:34513733
Prediction of the mechanism of miRNAs in laryngeal squamous cell carcinoma based on the miRNA-mRNA regulatory network.
PMID:34513340
Full-length transcriptome analysis of Spodoptera frugiperda larval brain reveals detoxification genes.
PMID:34513339
Identification of Potential Biomarkers for Psoriasis by DNA Methylation and Gene Expression Datasets.
PMID:34512732
Proteomic profiling identifies CLEC4C expression as a novel biomarker of primary graft dysfunction after heart transplantation.
PMID:34511330
Complete genome sequence and identification of polyunsaturated fatty acid biosynthesis genes of the myxobacterium Minicystis rosea DSM 24000T.
PMID:34511070
The chromosome-scale genome of Magnolia officinalis provides insight into the evolutionary position of magnoliids.
PMID:34505009
De novo transcriptome assembly, polymorphic SSR markers development and population genetics analyses for southern corn rust (Puccinia polysora).
PMID:34504267
Global analysis of lysine acetylation in soybean leaves.
PMID:34504199
The tumor suppressor miR-642a-5p targets Wilms Tumor 1 gene and cell-cycle progression in prostate cancer.
PMID:34504167
Dietary calcium supplementation promotes the accumulation of intramuscular fat.
PMID:34503581
De novo transcriptome analysis provides insights into formation of in vitro adventitious root from leaf explants of Arnebia euchroma.
PMID:34503445
Common Genetic Aberrations Associated with Metabolic Interferences in Human Type-2 Diabetes and Acute Myeloid Leukemia: A Bioinformatics Approach.
PMID:34502231
Mutation landscape of multiple myeloma measurable residual disease: identification of targets for precision medicine.
PMID:34500459
Construction and analysis of a novel ferroptosis-related gene signature predicting prognosis in lung adenocarcinoma.
PMID:34499810
Recipient APOL1 risk alleles associate with death-censored renal allograft survival and rejection episodes.
PMID:34499625
Herbaspirillum seropedicae expresses non-phosphorylative pathways for D-xylose catabolism.
PMID:34499201
Gene-gene relationships in an Escherichia coli accessory genome are linked to function and mobility.
PMID:34499026
Identification of Immune-Related Risk Signatures for the Prognostic Prediction in Oral Squamous Cell Carcinoma.
PMID:34497859
Early phase of effective treatment induces distinct transcriptional changes in Mycobacterium tuberculosis expelled by pulmonary tuberculosis patients.
PMID:34497280
Cabazitaxel suppresses colorectal cancer cell growth via enhancing the p53 antitumor pathway.
PMID:34496154
Mitochondrial dysfunction-induced H3K27 hyperacetylation perturbs enhancers in Parkinson's disease.
PMID:34494552
Weakly activated core inflammation pathways were identified as a central signaling mechanism contributing to the chronic neurodegeneration in Alzheimer's disease.
PMID:34494019
Integrative Analyses of Genes Associated with Hashimoto's Thyroiditis.
PMID:34493981
RNA-seq profiling reveals PBMC RNA as a potential biomarker for hepatocellular carcinoma.
PMID:34493740
Pathway analysis in metabolomics: Recommendations for the use of over-representation analysis.
PMID:34492007
Identification of Potential Biomarkers Associated with Acute Myocardial Infarction by Weighted Gene Coexpression Network Analysis.
PMID:34490057
Comparative Proteomic Analysis of the Defense Response to Gibberella Stalk Rot in Maize and Reveals That ZmWRKY83 Is Involved in Plant Disease Resistance.
PMID:34489999
Gelatin methacrylate hydrogels culture model for glioblastoma cells enriches for mesenchymal-like state and models interactions with immune cells.
PMID:34489494
Dectin-2 mediates phagocytosis of Lactobacillus paracasei KW3110 and IL-10 production by macrophages.
PMID:34489491
The genome sequence provides insights into salt tolerance of Achnatherum splendens (Gramineae), a constructive species of alkaline grassland.
PMID:34487631
Gene expression and prognosis of x-ray repair cross-complementing family members in non-small cell lung cancer.
PMID:34486486
Identifying Breast Cancer-Related Genes Based on a Novel Computational Framework Involving KEGG Pathways and PPI Network Modularity.
PMID:34484285
Metagenomic Investigation Uncovers Presence of Probiotic-Type Microbiome in Kalparasa® (Fresh Unfermented Coconut Inflorescence Sap).
PMID:34484136
Antibacterial Activity and Membrane-Targeting Mechanism of Aloe-Emodin Against Staphylococcus epidermidis.
PMID:34484130
Centromere protein E as a novel biomarker and potential therapeutic target for retinoblastoma.
PMID:34482803
Proteomic traits vary across taxa in a coastal Antarctic phytoplankton bloom.
PMID:34482372
Proteome analysis identified proteins associated with mitochondrial function and inflammation activation crucially regulating the pathogenesis of fatty liver disease.
PMID:34481473
Ischemic stroke induces cardiac dysfunction and alters transcriptome profile in mice.
PMID:34481466
Zanthoxylum-specific whole genome duplication and recent activity of transposable elements in the highly repetitive paleotetraploid Z. bungeanum genome.
PMID:34480029
SOD2- and NRF2-associated Gene Signature to Predict Radioresistance in Head and Neck Cancer.
PMID:34479919
Arms race in a cell: genomic, transcriptomic, and proteomic insights into intracellular phage-bacteria interplay in deep-sea snail holobionts.
PMID:34479645
Sulfarotene, a synthetic retinoid, overcomes stemness and sorafenib resistance of hepatocellular carcinoma via suppressing SOS2-RAS pathway.
PMID:34479623
Transcriptome analysis provides genome annotation and expression profiles in the central nervous system of Lymnaea stagnalis at different ages.
PMID:34479505
DTI-HeNE: a novel method for drug-target interaction prediction based on heterogeneous network embedding.
PMID:34479477
Bioinformatics-based study to identify immune infiltration and inflammatory-related hub genes as biomarkers for the treatment of rheumatoid arthritis.
PMID:34477936
INHBA is a novel mediator regulating cellular senescence and immune evasion in colorectal cancer.
PMID:34476008
Duo: A Signature Based Method to Batch-Analyze Functional Similarities of Proteins.
PMID:34475860
A ferroptosis-associated gene signature for the prediction of prognosis and therapeutic response in luminal-type breast carcinoma.
PMID:34475496
Transcriptional expression of ZICs as an independent indicator of survival in gliomas.
PMID:34475426
Proteomic response and molecular regulatory mechanisms of Bacillus cereus spores under ultrasound treatment.
PMID:34474268
Metabolomics reveal alterations in arachidonic acid metabolism in Schistosoma mekongi after exposure to praziquantel.
PMID:34473691
Assembling stable syntrophic Escherichia coli communities by comprehensively identifying beneficiaries of secreted goods.
PMID:34469744
Therapeutic targeting of both dihydroorotate dehydrogenase and nucleoside transport in MYCN-amplified neuroblastoma.
PMID:34462431
Increased expression of fragmented tRNA promoted neuronal necrosis.
PMID:34462418
Host metabolic shift during systemic Salmonella infection revealed by comparative proteomics.
PMID:34461813
Multitrait GWAS to connect disease variants and biological mechanisms.
PMID:34460823
Small Intestinal Levels of the Branched Short-Chain Fatty Acid Isovalerate Are Elevated during Infection with Heligmosomoides polygyrus and Can Promote Helminth Fecundity.
PMID:34460289
Comparative transcriptomic analysis of the brain in Takifugu rubripes shows its tolerance to acute hypoxia.
PMID:34460041
Transcriptomic Analyses of the Adenoma-Carcinoma Sequence Identify Hallmarks Associated With the Onset of Colorectal Cancer.
PMID:34458146
Comprehensive Analysis of the Systemic Transcriptomic Alternations and Inflammatory Response during the Occurrence and Progress of COVID-19.
PMID:34457122
In silico identification of MicroRNAs targeting the key nucleator of stress granules, G3BP: Promising therapeutics for SARS-CoV-2 infection.
PMID:34456603
Microbial composition differs between production systems and is associated with growth performance and carcass quality in pigs.
PMID:34454609
Bayesian metamodeling of complex biological systems across varying representations.
PMID:34453000
A Systemic View of Carbohydrate Metabolism in Rice to Facilitate Productivity.
PMID:34451735
Subtractive Genomics Approach for Identification of Novel Therapeutic Drug Targets in Mycoplasma genitalium.
PMID:34451385
Microvesicles transfer mitochondria and increase mitochondrial function in brain endothelial cells.
PMID:34450196
The blood transcriptome prior to ovarian cancer diagnosis: A case-control study in the NOWAC postgenome cohort.
PMID:34449791
Safety Assessment of Microbicide 2P23 on the Rectal and Vaginal Microbiota and Its Antiviral Activity on HIV Infection.
PMID:34447373
Icariin, an Up-and-Coming Bioactive Compound Against Neurological Diseases: Network Pharmacology-Based Study and Literature Review.
PMID:34447243
Identification of key proteins in the signaling crossroads between wound healing and cancer hallmark phenotypes.
PMID:34446793
Global phylogenomic analyses of Mycobacterium abscessus provide context for non cystic fibrosis infections and the evolution of antibiotic resistance.
PMID:34446725
Drug Discovery of Spinal Muscular Atrophy (SMA) from the Computational Perspective: A Comprehensive Review.
PMID:34445667
Gene-Metabolite Network Analysis Revealed Tissue-Specific Accumulation of Therapeutic Metabolites in Mallotus japonicus.
PMID:34445541
Epidermal PPARγ Is a Key Homeostatic Regulator of Cutaneous Inflammation and Barrier Function in Mouse Skin.
PMID:34445339
Differential Retinal Protein Expression in Primary and Secondary Retinal Ganglion Cell Degeneration Identified by Integrated SWATH and Target-Based Proteomics.
PMID:34445296
High Concentration of an ISS-N1-Targeting Antisense Oligonucleotide Causes Massive Perturbation of the Transcriptome.
PMID:34445083
Genomic Insights into Drug Resistance Determinants in Cedecea neteri, A Rare Opportunistic Pathogen.
PMID:34442820
Cross-Shore and Depth Zonations in Bacterial Diversity Are Linked to Age and Source of Dissolved Organic Matter across the Intertidal Area of a Sandy Beach.
PMID:34442799
JDSNMF: Joint Deep Semi-Non-Negative Matrix Factorization for Learning Integrative Representation of Molecular Signals in Alzheimer's Disease.
PMID:34442330
Workflows for Rapid Functional Annotation of Diverse Arthropod Genomes.
PMID:34442314
Transcriptional Profiles of Diploid Mutant Apis mellifera Embryos after Knockout of csd by CRISPR/Cas9.
PMID:34442270
Overexpression and Activation of αvβ3 Integrin Differentially Affects TGFβ2 Signaling in Human Trabecular Meshwork Cells.
PMID:34440692
Identification of Targeted Proteins by Jamu Formulas for Different Efficacies Using Machine Learning Approach.
PMID:34440610
Whole-Genome Differentially Hydroxymethylated DNA Regions among Twins Discordant for Cardiovascular Death.
PMID:34440357
Biomolecule and Bioentity Interaction Databases in Systems Biology: A Comprehensive Review.
PMID:34439912
Quantitative Proteomic Analysis of Plasma after Remote Ischemic Conditioning in a Rhesus Monkey Ischemic Stroke Model.
PMID:34439830
Two Auxinic Herbicides Affect Brassica napus Plant Hormone Levels and Induce Molecular Changes in Transcription.
PMID:34439819
Subanesthetic ketamine rapidly alters medial prefrontal miRNAs involved in ubiquitin-mediated proteolysis.
PMID:34437591
Gut Microbiome and Metabolome Profiles Associated with High-Fat Diet in Mice.
PMID:34436423
Isolation, Phylogenetic and Gephyromycin Metabolites Characterization of New Exopolysaccharides-Bearing Antarctic Actinobacterium from Feces of Emperor Penguin.
PMID:34436297
Utilizing a Biology-Driven Approach to Map the Exposome in Health and Disease: An Essential Investment to Drive the Next Generation of Environmental Discovery.
PMID:34435882
A Comparative Taxonomic Profile of Microbial Polyethylene and Hydrocarbon-Degrading Communities in Diverse Environments.
PMID:34435063
Ferroptosis-Related Genes in Lung Adenocarcinoma: Prognostic Signature and Immune, Drug Resistance, Mutation Analysis.
PMID:34434214
Genetic response to nitrogen starvation in the aggressive Eucalyptus foliar pathogen Teratosphaeria destructans.
PMID:34432124
Bacterial surface properties influence the activity of the TAT-RasGAP317-326 antimicrobial peptide.
PMID:34430812
Intratumoral injection of caerin 1.1 and 1.9 peptides increases the efficacy of vaccinated TC-1 tumor-bearing mice with PD-1 blockade by modulating macrophage heterogeneity and the activation of CD8+ T cells in the tumor microenvironment.
PMID:34429969
Identification of new target proteins of a Urotensin-II receptor antagonist using transcriptome-based drug repositioning approach.
PMID:34429474
Transcriptomic analysis of a wild and a cultivated varieties of Capsicum annuum over fruit development and ripening.
PMID:34428253
Metagenome-wide association study revealed disease-specific landscape of the gut microbiome of systemic lupus erythematosus in Japanese.
PMID:34426398
Circulating MicroRNAs predict glycemic improvement and response to a behavioral intervention.
PMID:34425916
Identification of fibronectin 1 (FN1) and complement component 3 (C3) as immune infiltration-related biomarkers for diabetic nephropathy using integrated bioinformatic analysis.
PMID:34424825
C-X-C motif chemokine ligand 12: a potential therapeutic target in Duchenne muscular dystrophy.
PMID:34424816
KEGG mapping tools for uncovering hidden features in biological data.
PMID:34423492
TCF3 Regulates the Proliferation and Apoptosis of Human Spermatogonial Stem Cells by Targeting PODXL.
PMID:34422820
Decoupling Lineage-Associated Genes in Acute Myeloid Leukemia Reveals Inflammatory and Metabolic Signatures Associated With Outcomes.
PMID:34422660
CD86 Molecule Might Be a Novel Immune-Related Prognostic Biomarker for Patients With Bladder Cancer by Bioinformatics and Experimental Assays.
PMID:34422632
Long Non-coding RNA RP11-395G23.3 Acts as a Competing Endogenous RNA of miR-124-3p to Regulate ROR1 in Anaplastic Thyroid Carcinoma.
PMID:34421987
Metabolomic Analysis Provides New Insight Into Tolerance of Huanglongbing in Citrus.
PMID:34421957
Dual Transcriptomic Analyses Unveil Host-Pathogen Interactions Between Salmonella enterica Serovar Enteritidis and Laying Ducks (Anas platyrhynchos).
PMID:34421865
Identifying causal models between genetically regulated methylation patterns and gene expression in healthy colon tissue.
PMID:34419169
Comparison of 16S and whole genome dog microbiomes using machine learning.
PMID:34419136
A novel survival model based on a Ferroptosis-related gene signature for predicting overall survival in bladder cancer.
PMID:34418989
Pathogen and drought stress affect cell wall and phytohormone signaling to shape host responses in a sorghum COMT bmr12 mutant.
PMID:34418969
HIV-1 Tat and cocaine impact astrocytic energy reservoir influence on miRNA epigenetic regulation.
PMID:34418497
Metabolic Alterations in Preneoplastic Development Revealed by Untargeted Metabolomic Analysis.
PMID:34414180
Resource-diversity relationships in bacterial communities reflect the network structure of microbial metabolism.
PMID:34413507
SARS-CoV-2 infection initiates interleukin-17-enriched transcriptional response in different cells from multiple organs.
PMID:34413339
The metabolic footprint of Clostridia and Erysipelotrichia reveals their role in depleting sugar alcohols in the cecum.
PMID:34412707
Searchlight: automated bulk RNA-seq exploration and visualisation using dynamically generated R scripts.
PMID:34412594
Ten simple rules for creating reusable pathway models for computational analysis and visualization.
PMID:34411100
Complete Genome Sequence of Gelria sp. Strain Kuro-4, a Thermophilic Anaerobe Isolated from a Thermophilic Anaerobic Digestion Reactor Treating Poly(L-Lactic Acid).
PMID:34410156
Gene expression profile analysis of gallic acid-induced cell death process.
PMID:34408198
RNA sequencing reveals niche gene expression effects of beta-hydroxybutyrate in primary myotubes.
PMID:34407998
A metabolic daylength measurement system mediates winter photoperiodism in plants.
PMID:34407427
Molecular remission at T cell level in patients with rheumatoid arthritis.
PMID:34404865
Phylogenomics of a new fungal phylum reveals multiple waves of reductive evolution across Holomycota.
PMID:34404788
Identification of PLA2G7 as a novel biomarker of diffuse large B cell lymphoma.
PMID:34404374
Bioinformatics analysis of the transcriptional expression of minichromosome maintenance proteins as potential indicators of survival in patients with cervical cancer.
PMID:34404366
Pterin-based pigmentation in animals.
PMID:34403644
Metabolic profiling of maternal serum of women at high-risk of spontaneous preterm birth using NMR and MGWAS approach.
PMID:34402867
XOmiVAE: an interpretable deep learning model for cancer classification using high-dimensional omics data.
PMID:34402865
KLF10 integrates circadian timing and sugar signaling to coordinate hepatic metabolism.
PMID:34402428
Key sunitinib-related biomarkers for renal cell carcinoma.
PMID:34402193
Revealing the role of Plant Growth Promoting Rhizobacteria in suppressive soils against Fusarium oxysporum f.sp. cubense based on metagenomic analysis.
PMID:34401567
Capabilities of bioinformatics tools for optimizing physicochemical features of proteins used in Nano biosensors: A short overview of the tools related to bioinformatics.
PMID:34401530
Association study of taste preference: Analysis in the Lithuanian population.
PMID:34401081
Bacterial composition and function during fermentation of Mongolia koumiss.
PMID:34401066
MiR-508-3p promotes proliferation and inhibits apoptosis of middle ear cholesteatoma cells by targeting PTEN/PI3K/AKT pathway.
PMID:34400892
Microarray Analysis of Differential Gene Expression Between Traumatic Temporomandibular Joint Fibrous and Bony Ankylosis in a Sheep Model.
PMID:34400603
Identification of novel biomarkers in Hunner's interstitial cystitis using the CIBERSORT, an algorithm based on machine learning.
PMID:34399738
The PilB-PilZ-FimX regulatory complex of the Type IV pilus from Xanthomonas citri.
PMID:34398935
Contrasting gut microbiota in captive Eurasian otters (Lutra lutra) by age.
PMID:34398307
A systematic comparison of data- and knowledge-driven approaches to disease subtype discovery.
PMID:34396389
Bioinformatics Analysis of Potential Biomarkers and Pathway Identification for Major Depressive Disorder.
PMID:34394704
m5C-Related Signatures for Predicting Prognosis in Cutaneous Melanoma with Machine Learning.
PMID:34394351
Potential genes and pathways associated with heterotopic ossification derived from analyses of gene expression profiles.
PMID:34389038
RNA-Seq analysis reveals potential regulators of programmed cell death and leaf remodelling in lace plant (Aponogeton madagascariensis).
PMID:34388962
Comprior: facilitating the implementation and automated benchmarking of prior knowledge-based feature selection approaches on gene expression data sets.
PMID:34384353
Identification of candidate biomarkers correlated with poor prognosis of breast cancer based on bioinformatics analysis.
PMID:34384030
Integration of chronological omics data reveals mitochondrial regulatory mechanisms during the development of hepatocellular carcinoma.
PMID:34383828
Amphiregulin promotes hair regeneration of skin-derived precursors via the PI3K and MAPK pathways.
PMID:34382262
Arabidopsis Coexpression Tool: a tool for gene coexpression analysis in Arabidopsis thaliana.
PMID:34381973
Exploring tissue architecture using spatial transcriptomics.
PMID:34381231
Molecular and functional characterization of detrusor PDGFRα positive cells in spinal cord injury-induced detrusor overactivity.
PMID:34381120
Differential and shared effects of eicosapentaenoic acid and docosahexaenoic acid on serum metabolome in subjects with chronic inflammation.
PMID:34381108
Lactobacillus fermentum PS150 promotes non-rapid eye movement sleep in the first night effect of mice.
PMID:34381098
Unique Gut Microbiome in HIV Patients on Antiretroviral Therapy (ART) Suggests Association with Chronic Inflammation.
PMID:34378948
Identification of prognostic biomarkers related to the tumor microenvironment in thyroid carcinoma.
PMID:34376710
The molecular basis, genetic control and pleiotropic effects of local gene co-expression.
PMID:34376650
Elucidation of dynamic microRNA regulations in cancer progression using integrative machine learning.
PMID:34373890
Comparative transcriptome analysis of the gills and hepatopancreas from Macrobrachium rosenbergii exposed to the heavy metal Cadmium (Cd2+).
PMID:34373575
A genome-scale metabolic model of Saccharomyces cerevisiae that integrates expression constraints and reaction thermodynamics.
PMID:34373465
FcγR engagement reprograms neutrophils into antigen cross-presenting cells that elicit acquired anti-tumor immunity.
PMID:34373452
Integrative oncogene-dependency mapping identifies RIT1 vulnerabilities and synergies in lung cancer.
PMID:34373451
Inhibiting Type VI Secretion System Activity with a Biomimetic Peptide Designed To Target the Baseplate Wedge Complex.
PMID:34372705
Defense-Related Gene Expression Following an Orthotospovirus Infection Is Influenced by Host Resistance in Arachis hypogaea.
PMID:34372510
Transcriptome and Small RNA Combined Sequencing Analysis of Cold Tolerance in Non-heading Chinese Cabbage.
PMID:34367230
A Tissue-Specific Landscape of Alternative Polyadenylation, lncRNAs, TFs, and Gene Co-expression Networks in Liriodendron chinense.
PMID:34367224
Cellular costs underpin micronutrient limitation in phytoplankton.
PMID:34362734
Resilience of Microbial Communities after Hydrogen Peroxide Treatment of a Eutrophic Lake to Suppress Harmful Cyanobacterial Blooms.
PMID:34361929
CYPstrate: A Set of Machine Learning Models for the Accurate Classification of Cytochrome P450 Enzyme Substrates and Non-Substrates.
PMID:34361831
Interstrain Variability of Human Vaginal Lactobacillus crispatus for Metabolism of Biogenic Amines and Antimicrobial Activity against Urogenital Pathogens.
PMID:34361691
Long-Term Fluoxetine Administration Causes Substantial Lipidome Alteration of the Juvenile Macaque Brain.
PMID:34360852
SARS-CoV-2 Infected Pediatric Cerebral Cortical Neurons: Transcriptomic Analysis and Potential Role of Toll-like Receptors in Pathogenesis.
PMID:34360824
Altered Root Growth, Auxin Metabolism and Distribution in Arabidopsis thaliana Exposed to Salt and Osmotic Stress.
PMID:34360759
Transcriptomic and Metabolic Network Analysis of Metabolic Reprogramming and IGF-1 Modulation in SCA3 Transgenic Mice.
PMID:34360740
Comparative Proteomic and Metabolomic Analysis of Human Osteoblasts, Differentiated from Dental Pulp Stem Cells, Hinted Crucial Signaling Pathways Promoting Osteogenesis.
PMID:34360674
Two-Pore Channels Regulate Expression of Various Receptors and Their Pathway-Related Proteins in Multiple Ways.
PMID:34359976
WIP1 Inhibition by GSK2830371 Potentiates HDM201 through Enhanced p53 Phosphorylation and Activation in Liver Adenocarcinoma Cells.
PMID:34359777
Functional Analysis of Non-Genetic Resistance to Platinum in Epithelial Ovarian Cancer Reveals a Role for the MBD3-NuRD Complex in Resistance Development.
PMID:34359703
Characterization of an Ex Vivo Equine Endometrial Tissue Culture Model Using Next-Generation RNA-Sequencing Technology.
PMID:34359123
Efficacy of signal peptide predictors in identifying signal peptides in the experimental secretome of Picrophilous torridus, a thermoacidophilic archaeon.
PMID:34358261
The USDA-ARS Ag100Pest Initiative: High-Quality Genome Assemblies for Agricultural Pest Arthropod Research.
PMID:34357286
Sorghum's Whole-Plant Transcriptome and Proteome Responses to Drought Stress: A Review.
PMID:34357076
mRNA Inventory of Extracellular Vesicles from Ustilago maydis.
PMID:34356940
Identification of Potential Kinase Inhibitors within the PI3K/AKT Pathway of Leishmania Species.
PMID:34356660
FLAME: A Web Tool for Functional and Literature Enrichment Analysis of Multiple Gene Lists.
PMID:34356520
Reelin Alleviates Mesenchymal Stem Cell Senescence and Reduces Pathological α-Synuclein Expression in an In Vitro Model of Parkinson's Disease.
PMID:34356083
Expanding the MECP2 network using comparative genomics reveals potential therapeutic targets for Rett syndrome.
PMID:34355696
Feeding Systems and Host Breeds Influence Ruminal Fermentation, Methane Production, Microbial Diversity and Metagenomic Gene Abundance.
PMID:34354694
Efficacy of Plant Growth-Promoting Bacteria Bacillus cereus YN917 for Biocontrol of Rice Blast.
PMID:34354684
Understanding the impact of SNPs associated with autism spectrum disorder on biological pathways in the human fetal and adult cortex.
PMID:34354167
An extended reconstruction of human gut microbiota metabolism of dietary compounds.
PMID:34354065
Can We Estimate Functionality of Soil Microbial Communities from Structure-Derived Predictions? A Reality Test in Agricultural Soils.
PMID:34346741
Comprehensive analysis of the expression and prognosis for TNFAIPs in head and neck cancer.
PMID:34344926
Effects of low lead exposure on sperm quality and sperm DNA methylation in adult men.
PMID:34344450
Long non-coding RNA profile study identifies a metabolism-related signature for colorectal cancer.
PMID:34344319
Diet-derived transmission of MicroRNAs from host plant into honey bee Midgut.
PMID:34344297
Exploring Proteomes of Robust Yarrowia lipolytica Isolates Cultivated in Biomass Hydrolysate Reveals Key Processes Impacting Mixed Sugar Utilization, Lipid Accumulation, and Degradation.
PMID:34342539
Plasma expression of microRNA-425-5p and microRNA-451a as biomarkers of cardiovascular disease in rheumatoid arthritis patients.
PMID:34341435
Longitudinal stability of urinary extracellular vesicle protein patterns within and between individuals.
PMID:34341426
Exploring the genes involved in biosynthesis of dihydroquercetin and dihydromyricetin in Ampelopsis grossedentata.
PMID:34341423
Genomic insights into the antibiotic resistance pattern of the tetracycline-degrading bacterium, Arthrobacter nicotianae OTC-16.
PMID:34341372
The Meloidogyne javanica effector Mj2G02 interferes with jasmonic acid signalling to suppress cell death and promote parasitism in Arabidopsis.
PMID:34339585
A Metabolomic Signature of Glucagon Action in Healthy Individuals With Overweight/Obesity.
PMID:34337278
Uncovering Potential lncRNAs and mRNAs in the Progression From Acute Myocardial Infarction to Myocardial Fibrosis to Heart Failure.
PMID:34336943
Impact of Weaning and Maternal Immune Activation on the Metabolism of Pigs.
PMID:34336923
Prognostic Value of a Novel Signature With Nine Hepatitis C Virus-Induced Genes in Hepatic Cancer by Mining GEO and TCGA Databases.
PMID:34336819
A Personalized Therapeutics Approach Using an In Silico Drosophila Patient Model Reveals Optimal Chemo- and Targeted Therapy Combinations for Colorectal Cancer.
PMID:34336681
The Role of Gene Duplication in the Divergence of Enzyme Function: A Comparative Approach.
PMID:34335678
Host habitat is the major determinant of the gut microbiome of fish.
PMID:34332628
Computational identification of repurposed drugs against viruses causing epidemics and pandemics via drug-target network analysis.
PMID:34332351
Physiological and interactomic analysis reveals versatile functions of Arabidopsis 14-3-3 quadruple mutants in response to Fe deficiency.
PMID:34330973
A chromosome-level genome assembly of Cairina moschata and comparative genomic analyses.
PMID:34330207
Clinical Genetic Risk Variants Inform a Functional Protein Interaction Network for Tetralogy of Fallot.
PMID:34328347
Pyroptosis-Related Gene Signatures Can Robustly Diagnose Skin Cutaneous Melanoma and Predict the Prognosis.
PMID:34327145
Neurotranscriptomic changes associated with chick-directed parental care in adult non-reproductive Japanese quail.
PMID:34326416
Morpho-metabotyping the oxidative stress response.
PMID:34326354
Comparative transcriptome analysis reveals regulatory network and regulators associated with proanthocyanidin accumulation in persimmon.
PMID:34325657
Transcriptional Profiling During Neural Conversion.
PMID:34324187
Anti-Microbiota Vaccines Modulate the Tick Microbiome in a Taxon-Specific Manner.
PMID:34322135
Cardiac-specific deletion of voltage dependent anion channel 2 leads to dilated cardiomyopathy by altering calcium homeostasis.
PMID:34321484
RCA2: a scalable supervised clustering algorithm that reduces batch effects in scRNA-seq data.
PMID:34320202
LncRNA AC007255.1, an immune-related prognostic enhancer RNA in esophageal cancer.
PMID:34316393
Identification of ferroptosis genes in immune infiltration and prognosis in thyroid papillary carcinoma using network analysis.
PMID:34315405
VarSAn: associating pathways with a set of genomic variants using network analysis.
PMID:34313777
Integrative analysis reveals the prognostic value and functions of splicing factors implicated in hepatocellular carcinoma.
PMID:34312475
Rapid ecosystem-scale consequences of acute deoxygenation on a Caribbean coral reef.
PMID:34312399
Network Pharmacology-Based Mechanistic Investigation of Jinshui Huanxian Formula Acting on Idiopathic Pulmonary Fibrosis.
PMID:34306156
The Role of INAPERTURATE POLLEN1 as a Pollen Aperture Factor Is Conserved in the Basal Eudicot Eschscholzia californica (Papaveraceae).
PMID:34305989
Genome skimming-based simple sequence repeat (SSR) marker discovery and characterization in Grevillea robusta.
PMID:34305342
Local intestinal microbiota response and systemic effects of feeding black soldier fly larvae to replace soybean meal in growing pigs.
PMID:34302029
Dynamic regulation of small RNAs in anthocyanin accumulation during blueberry fruit maturation.
PMID:34301985
A graph neural network model to estimate cell-wise metabolic flux using single-cell RNA-seq data.
PMID:34301623
Genomic signatures of the unjamming transition in compressed human bronchial epithelial cells.
PMID:34301595
Compatibility of Distinct Label-Free Proteomic Workflows in Absolute Quantification of Proteins Linked to the Oocyte Quality in Human Follicular Fluid.
PMID:34299044
An Integrative Study of Aortic mRNA/miRNA Longitudinal Changes in Long-Term LVAD Support.
PMID:34299034
Analysis of Immune Associated Co-Expression Networks Reveals Immune-Related Long Non-Coding RNAs during MI in the Presence and Absence of HDC.
PMID:34299019
Pectobacterium parmentieri SCC 3193 Mutants with Altered Synthesis of Cell Surface Polysaccharides Are Resistant to N4-Like Lytic Bacteriophage ϕA38 (vB_Ppp_A38) but Express Decreased Virulence in Potato (Solanum tuberosum L.) Plants.
PMID:34298965
Effect of the Electromagnetic Field (EMF) Radiation on Transcriptomic Profile of Pig Myometrium during the Peri-Implantation Period-An In Vitro Study.
PMID:34298942
SPTAN1 Expression Predicts Treatment and Survival Outcomes in Colorectal Cancer.
PMID:34298848
Study on the mechanism of the Modified Ginseng-Schisandra Decoction (MGSD) in the treatment of recurrent respiratory tract infection (RRTI) based on network pharmacology.
PMID:34295785
Transcriptome-level assessment of the impact of deformed wing virus on honey bee larvae.
PMID:34294840
Transcriptome analysis of flowering regulation by sowing date in Japonica Rice (Oryza sativa L.).
PMID:34294838
Dissecting the chromosome-level genome of the Asian Clam (Corbicula fluminea).
PMID:34294825
Genomic analysis of field pennycress (Thlaspi arvense) provides insights into mechanisms of adaptation to high elevation.
PMID:34294107
Systemic characterization of alternative splicing related to prognosis and immune infiltration in malignant mesothelioma.
PMID:34294080
Mesenchymal stem cell-derived exosomes protect trabecular meshwork from oxidative stress.
PMID:34290351
Genome-wide chromatin accessibility analyses provide a map for enhancing optic nerve regeneration.
PMID:34290335
Identification of Key Genes and Underlying Mechanisms in Acute Kawasaki Disease Based on Bioinformatics Analysis.
PMID:34290221
Interspecific variation and functional traits of the gut microbiome in spiders from the wild: The largest effort so far.
PMID:34288947
Genome-scale metabolic modeling reveals key features of a minimal gene set.
PMID:34288418
D- and l-amino acid concentrations in culture broth of Lactobacillus are highly dependent on the phylogenetic group of Lactobacillus.
PMID:34286112
Comparative transcriptomic analysis of two Saccharopolyspora spinosa strains reveals the relationships between primary metabolism and spinosad production.
PMID:34285307
Characterization of two closely related citrus cultivars using UPLC-ESI-MS/MS-based widely targeted metabolomics.
PMID:34283861
Transcriptome and proteome of the corm, leaf and flower of Hypoxis hemerocallidea (African potato).
PMID:34283859
Ear wound healing in MRL/MpJ mice is associated with gut microbiome composition and is transferable to non-healer mice via microbiome transplantation.
PMID:34283837
Differential Regulation of Lacto-/Neolacto- Glycosphingolipid Biosynthesis Pathway Reveals Transcription Factors as Potential Candidates in Triple-Negative Breast Cancer.
PMID:34283051
Untargeted metabolomics and transcriptomics identified glutathione metabolism disturbance and PCS and TMAO as potential biomarkers for ER stress in lung.
PMID:34282162
Functional annotation of noncoding mutations in cancer.
PMID:34282050
RNA sequencing indicates age-dependent shifts in the cardiac fibroblast transcriptome between fetal, neonatal, and adult developmental ages.
PMID:34281425
Map of dimorphic switching‑related signaling pathways in Sporothrix schenckii based on its transcriptome.
PMID:34278493
Transcriptomics and Metabolomics Reveal Purine and Phenylpropanoid Metabolism Response to Drought Stress in Dendrobium sinense, an Endemic Orchid Species in Hainan Island.
PMID:34276795
Experimental and Genomic Evaluation of the Oestrogen Degrading Bacterium Rhodococcus equi ATCC13557.
PMID:34276604
Prognostic significance and oncogene function of cathepsin A in hepatocellular carcinoma.
PMID:34272452
Proteomics and metabonomics analyses of Covid-19 complications in patients with pulmonary fibrosis.
PMID:34272434
Decoding the molecular mechanism of parthenocarpy in Musa spp. through protein-protein interaction network.
PMID:34272422
KLRD1, FOSL2 and LILRB3 as potential biomarkers for plaques progression in acute myocardial infarction and stable coronary artery disease.
PMID:34271875
A novel immune-related gene pair prognostic signature for predicting overall survival in bladder cancer.
PMID:34266411
Global analysis of protein lysine 2-hydroxyisobutyrylation (Khib) profiles in Chinese herb rhubarb (Dahuang).
PMID:34266380
Data integration uncovers the metabolic bases of phenotypic variation in yeast.
PMID:34264947
Pipeline for Analyzing Activity of Metabolic Pathways in Planktonic Communities Using Metatranscriptomic Data.
PMID:34264744
Profiling Basal Forebrain Cholinergic Neurons Reveals a Molecular Basis for Vulnerability Within the Ts65Dn Model of Down Syndrome and Alzheimer's Disease.
PMID:34263425
Global Screening of LUBAC and OTULIN Interacting Proteins by Human Proteome Microarray.
PMID:34262903
Physiological and transcriptome analyses for assessing the effects of exogenous uniconazole on drought tolerance in hemp (Cannabis sativa L.).
PMID:34262091
A system biology approach based on metabolic biomarkers and protein-protein interactions for identifying pathways underlying schizophrenia and bipolar disorder.
PMID:34262063
Extensive standing genetic variation from a small number of founders enables rapid adaptation in Daphnia.
PMID:34262034
Let-7b-5p in vesicles secreted by human airway cells reduces biofilm formation and increases antibiotic sensitivity of P. aeruginosa.
PMID:34260396
Mechanisms of Antiviral Cytotoxic CD4 T Cell Differentiation.
PMID:34260270
Computational strategies for the discovery of biological functions of health foods, nutraceuticals and cosmeceuticals: a review.
PMID:34258685
Genome sequence of Apostasia ramifera provides insights into the adaptive evolution in orchids.
PMID:34256691
Accurate transcriptome assembly by Nanopore RNA sequencing reveals novel functional transcripts in hepatocellular carcinoma.
PMID:34255396
A HML6 endogenous retrovirus on chromosome 3 is upregulated in amyotrophic lateral sclerosis motor cortex.
PMID:34253796
Integrative biology defines novel biomarkers of resistance to strongylid infection in horses.
PMID:34253752
The role of CCR2 in prognosis of patients with endometrial cancer and tumor microenvironment remodeling.
PMID:34251980
Using Cell Type-Specific Genes to Identify Cell-Type Transitions Between Different in vitro Culture Conditions.
PMID:34249906
Systems Biomedicine of Primary and Metastatic Colorectal Cancer Reveals Potential Therapeutic Targets.
PMID:34249670
Comparative analysis of fatty acid metabolism based on transcriptome sequencing of wild and cultivated Ophiocordyceps sinensis.
PMID:34249512
Analysis of ceRNA network of differentially expressed genes in FaDu cell line and a cisplatin-resistant line derived from it.
PMID:34249502
Overlapping Structures Detection in Protein-Protein Interaction Networks Using Community Detection Algorithm Based on Neighbor Clustering Coefficient.
PMID:34249104
A Chromosome-Level Genome Assembly of the Mandarin Fish (Siniperca chuatsi).
PMID:34249093
Identification of an EMT-Related Gene Signature for Predicting Overall Survival in Gastric Cancer.
PMID:34249086
E183K Mutation in Chalcone Synthase C2 Causes Protein Aggregation and Maize Colorless.
PMID:34249050
In vivo Inhibition of the 3-Dehydroquinate Synthase by 7-Deoxysedoheptulose Depends on Promiscuous Uptake by Sugar Transporters in Cyanobacteria.
PMID:34248919
Endophytic Bacillus altitudinis Strain Uses Different Novelty Molecular Pathways to Enhance Plant Growth.
PMID:34248918
Low Global Diversity of Candidatus Microthrix, a Troublesome Filamentous Organism in Full-Scale WWTPs.
PMID:34248915
Measurement of Volatile Compounds for Real-Time Analysis of Soil Microbial Metabolic Response to Simulated Snowmelt.
PMID:34248891
Surfaceome and Exoproteome Dynamics in Dual-Species Pseudomonas aeruginosa and Staphylococcus aureus Biofilms.
PMID:34248881
Whole-Genome Metagenomic Analysis of the Gut Microbiome in HIV-1-Infected Individuals on Antiretroviral Therapy.
PMID:34248876
Interplay of Various Evolutionary Modes in Genome Diversification and Adaptive Evolution of the Family Sulfolobaceae.
PMID:34248865
Unravelling the Importance of Diazotrophy in Corals - Combined Assessment of Nitrogen Assimilation, Diazotrophic Community and Natural Stable Isotope Signatures.
PMID:34248863
Microbiota Modulates Cardiac Transcriptional Responses to Intermittent Hypoxia and Hypercapnia.
PMID:34248668
DNA methylation analysis reveals epimutation hotspots in patients with dilated cardiomyopathy-associated laminopathies.
PMID:34246298
Transcriptome and metabolome analyses of cold and darkness-induced pellicle cysts of Scrippsiella trochoidea.
PMID:34246248
MicroRNA-378a-3p is overexpressed in psoriasis and modulates cell cycle arrest in keratinocytes via targeting BMP2 gene.
PMID:34244572
Trehalose in pine wood nematode participates in DJ3 formation and confers resistance to low-temperature stress.
PMID:34243706
Key Technologies for Progressing Discovery of Microbiome-Based Medicines.
PMID:34239510
Integrative analysis of key candidate genes and signaling pathways in acute coronary syndrome related to obstructive sleep apnea by bioinformatics.
PMID:34239024
Exosomal hsa_circRNA_104484 and hsa_circRNA_104670 may serve as potential novel biomarkers and therapeutic targets for sepsis.
PMID:34238972
Identification of anticancer drug target genes using an outside competitive dynamics model on cancer signaling networks.
PMID:34238960
TBX5-AS1, an enhancer RNA, is a potential novel prognostic biomarker for lung adenocarcinoma.
PMID:34238250
Identification of viral-mediated pathogenic mechanisms in neurodegenerative diseases using network-based approaches.
PMID:34237135
Application of Machine Learning for Drug-Target Interaction Prediction.
PMID:34234813
Selection of functional EPHB2 genotypes from ENU mutated grass carp treated with GCRV.
PMID:34233620
Screening of key biomarkers and immune infiltration in Pulmonary Arterial Hypertension via integrated bioinformatics analysis.
PMID:34233597
Gut microbiota signature of pathogen-dependent dysbiosis in viral gastroenteritis.
PMID:34230563
A circular RNAs dataset landscape reveals potential signatures for the detection and prognosis of early-stage lung adenocarcinoma.
PMID:34229638
Transcriptome analysis of five ovarian stages reveals gonad maturation in female Macrobrachium nipponense.
PMID:34229608
Transcriptome analysis of chloride intracellular channel knockdown in Drosophila identifies oxidation-reduction function as possible mechanism of altered sensitivity to ethanol sedation.
PMID:34228751
Genome-wide association study of stimulant dependence.
PMID:34226506
Protocol for HSDFinder: Identifying, annotating, categorizing, and visualizing duplicated genes in eukaryotic genomes.
PMID:34223195
Integrated Metagenomic and Transcriptomic Analyses Reveal the Dietary Dependent Recovery of Host Metabolism From Antibiotic Exposure.
PMID:34222250
Intestinal Microbiota Mediates High-Fructose and High-Fat Diets to Induce Chronic Intestinal Inflammation.
PMID:34222037
Pooled Sequencing Analysis of Geese (Anser cygnoides) Reveals Genomic Variations Associated With Feather Color.
PMID:34220935
9-Gene Signature Correlated With CD8+ T Cell Infiltration Activated by IFN-γ: A Biomarker of Immune Checkpoint Therapy Response in Melanoma.
PMID:34220795
Bacterial Protein Interaction Networks: Connectivity is Ruled by Gene Conservation, Essentiality and Function.
PMID:34220298
Integrated analysis of long non-coding RNAs and mRNAs associated with malignant transformation of gastrointestinal stromal tumors.
PMID:34218261
Aberrantly methylated-differentially genes and pathways among Iranian patients with colorectal cancer.
PMID:34217303
Genetic determinants of multiple myeloma risk within the Wnt/beta-catenin signaling pathway.
PMID:34216957
eVIP2: Expression-based variant impact phenotyping to predict the function of gene variants.
PMID:34214079
Multi-omics analysis of glucose-mediated signaling by a moonlighting Gβ protein Asc1/RACK1.
PMID:34214075
Introducing the novel Cytoscape app TimeNexus to analyze time-series data using temporal MultiLayer Networks (tMLNs).
PMID:34211067
Machine learning compensates fold-change method and highlights oxidative phosphorylation in the brain transcriptome of Alzheimer's disease.
PMID:34211065
A pan-cancer transcriptomic study showing tumor specific alterations in central metabolism.
PMID:34211032
Ganoderma lucidum promotes sleep through a gut microbiota-dependent and serotonin-involved pathway in mice.
PMID:34211003
High expression of DNA damage-inducible transcript 4 (DDIT4) is associated with advanced pathological features in the patients with colorectal cancer.
PMID:34211002
Clinical characteristics and genetic spectrum of 26 individuals of Chinese origin with primary ciliary dyskinesia.
PMID:34210339
Comparative Transcriptome Analysis Reveals Regulatory Networks during the Maize Ear Shank Elongation Process.
PMID:34209973
Proteomic Profiling of Tissue Exosomes Indicates Continuous Release of Malignant Exosomes in Urinary Bladder Cancer Patients, Even with Pathologically Undetectable Tumour.
PMID:34209558
Comparison of Transcriptomic Profiles of MiaPaCa-2 Pancreatic Cancer Cells Treated with Different Statins.
PMID:34207840
Genome-Wide Transcriptomic Analysis of Non-Tumorigenic Tissues Reveals Aging-Related Prognostic Markers and Drug Targets in Renal Cell Carcinoma.
PMID:34207247
Expression Status and Prognostic Value of m6A RNA Methylation Regulators in Lung Adenocarcinoma.
PMID:34206803
MicroRNA Expression Changes in Kidney Transplant: Diagnostic Efficacy of miR-150-5p as Potential Rejection Biomarker, Pilot Study.
PMID:34206682
Transcriptomic and Metabolic Profiling of High-Temperature Treated Storage Roots Reveals the Mechanism of Saccharification in Sweetpotato (Ipomoea batatas (L.) Lam.).
PMID:34206151
Right Ventricle Remodeling Metabolic Signature in Experimental Pulmonary Hypertension Models of Chronic Hypoxia and Monocrotaline Exposure.
PMID:34205639
Molecular Human Targets of Bioactive Alkaloid-Type Compounds from Tabernaemontana cymose Jacq.
PMID:34205626
Comparative Transcriptome Profiling of Kappaphycus alvarezii (Rhodophyta, Solieriaceae) in Response to Light of Different Wavelengths and Carbon Dioxide Enrichment.
PMID:34204578
Impact of Nosema Disease and American Foulbrood on Gut Bacterial Communities of Honeybees Apis mellifera.
PMID:34204079
Gene Expression and Isoform Identification of PacBio Full-Length cDNA Sequences for Berberine Biosynthesis in Berberis koreana.
PMID:34203474
Analysis of Host Jejunum Transcriptome and Associated Microbial Community Structure Variation in Young Calves with Feed-Induced Acidosis.
PMID:34201826
Bioinformatics Accelerates the Major Tetrad: A Real Boost for the Pharmaceutical Industry.
PMID:34201152
Extensive Metabolite Profiling in the Unexploited Organs of Black Tiger for Their Potential Valorization in the Pharmaceutical Industry.
PMID:34200589
HGF/c-Met Inhibition as Adjuvant Therapy Improves Outcomes in an Orthotopic Mouse Model of Pancreatic Cancer.
PMID:34199452
A prognostic nomogram based on competing endogenous RNA network for clear-cell renal cell carcinoma.
PMID:34196116
Subtractive proteomics approach to Unravel the druggable proteins of the emerging pathogen Waddlia chondrophila and drug repositioning on its MurB protein.
PMID:34195427
Comparative transcriptome analysis of the hyperaccumulator plant Phytolacca americana in response to cadmium stress.
PMID:34194911
Draft genome sequence and potential identification of a biosurfactant from Brevibacterium casei strain LS14 an isolate from fresh water Loktak Lake.
PMID:34194910
Transcriptome analysis insight into ethylene metabolism and pectinase activity of apricot (Prunus armeniaca L.) development and ripening.
PMID:34193901
Identification of potential microRNAs and KEGG pathways in denervation muscle atrophy based on meta-analysis.
PMID:34193880
Gene-rich UV sex chromosomes harbor conserved regulators of sexual development.
PMID:34193417
Down-regulation of BCL2L13 renders poor prognosis in clear cell and papillary renal cell carcinoma.
PMID:34193180
Upregulated CD58 is associated with clinicopathological characteristics and poor prognosis of patients with pancreatic ductal adenocarcinoma.
PMID:34193136
The subtype-specific molecular function of SPDEF in breast cancer and insights into prognostic significance.
PMID:34191390
In-Frame and Frameshift Mutations in Zebrafish Presenilin 2 Affect Different Cellular Functions in Young Adult Brains.
PMID:34189411
16S rRNA gene sequencing data of the human skin microbiome before and after swimming in the ocean.
PMID:34189199
The maintenance of microbial community in human fecal samples by a cost effective preservation buffer.
PMID:34188136
Comprehensive high-throughput meta-analysis of differentially expressed microRNAs in transcriptomic datasets reveals significant disruption of MAPK/JNK signal transduction pathway in Adult T-cell leukemia/lymphoma.
PMID:34187521
Reconstruction of the full-length transcriptome of cigar tobacco without a reference genome and characterization of anion channel/transporter transcripts.
PMID:34187357
StrongestPath: a Cytoscape application for protein-protein interaction analysis.
PMID:34187355
A diagnostic miRNA signature for pulmonary arterial hypertension using a consensus machine learning approach.
PMID:34186489
Epigenetic inheritance of DNA methylation changes in fish living in hydrogen sulfide-rich springs.
PMID:34185679
Drug-Drug Interaction Predictions via Knowledge Graph and Text Embedding: Instrument Validation Study.
PMID:34185011
Insights into the phylogeny and transcriptional response of serine proteases in a halotolerant cyanobacterium Halothece sp. PCC7418.
PMID:34184613
The glycosyltransferase ST3GAL2 is regulated by miR-615-3p in the intestinal tract of Campylobacter jejuni infected mice.
PMID:34183045
Gene expression analysis in EBV-infected ataxia-telangiectasia cell lines by RNA-sequencing reveals protein synthesis defect and immune abnormalities.
PMID:34183044
Reproductive developmental transcriptome analysis of Tripidium ravennae (Poaceae).
PMID:34182921
Ethnicity-specific alterations of plasma and hepatic lipidomic profiles are related to high NAFLD rate and severity in Hispanic Americans, a pilot study.
PMID:34182070
Conservation genomics reveals pesticide and pathogen exposure in the declining bumble bee Bombus terricola.
PMID:34181797
Analysis of Nuclear Encoded Mitochondrial Gene Networks in Cervical Cancer.
PMID:34181336
Potential therapeutic target genes for systemic lupus erythematosus: a bioinformatics analysis.
PMID:34180358
Identification of Suitable Meloidogyne spp. Housekeeping Genes.
PMID:34179799
Competing Endogenous RNA in Colorectal Cancer: An Analysis for Colon, Rectum, and Rectosigmoid Junction.
PMID:34178670
Cellular Metabolomics Profiles Associated With Drug Chemosensitivity in AML.
PMID:34178663
Assembling Disease Networks From Causal Interaction Resources.
PMID:34178043
A Combined Morphological and Molecular Evolutionary Analysis of Karst-Environment Adaptation for the Genus Urophysa (Ranunculaceae).
PMID:34177982
Acute Effects on the Human Peripheral Blood Transcriptome of Decompression Sickness Secondary to Scuba Diving.
PMID:34177613
Bioinformatics analysis of differentially expressed genes and pathways in the development of cervical cancer.
PMID:34174849
MCT4 is induced by metastasis-enhancing pathogenic mitochondrial NADH dehydrogenase gene mutations and can be a therapeutic target.
PMID:34172808
Lung adenocarcinoma and lung squamous cell carcinoma cancer classification, biomarker identification, and gene expression analysis using overlapping feature selection methods.
PMID:34172784
Genome-wide association analyses identify genotype-by-environment interactions of growth traits in Simmental cattle.
PMID:34172761
Attenuation of clinical and immunological outcomes during SARS-CoV-2 infection by ivermectin.
PMID:34170074
Evolution of fibroblasts in the lung metastatic microenvironment is driven by stage-specific transcriptional plasticity.
PMID:34169837
Metagenomic compendium of 189,680 DNA viruses from the human gut microbiome.
PMID:34168315
A mouse model of prenatal exposure to Interleukin-6 to study the developmental origin of health and disease.
PMID:34168254
Low-density lipoprotein receptor-related protein 1 (LRP1) is a novel receptor for apolipoprotein A4 (APOA4) in adipose tissue.
PMID:34168225
Transmitting silks of maize have a complex and dynamic microbiome.
PMID:34168223
Sodium lignosulfonate improves shoot growth of Oryza sativa via enhancement of photosynthetic activity and reduced accumulation of reactive oxygen species.
PMID:34168171
A comprehensive database for integrated analysis of omics data in autoimmune diseases.
PMID:34167460
Identification of hub genes in thyroid carcinoma to predict prognosis by integrated bioinformatics analysis.
PMID:34167437
The mechanisms of celastrol in treating papillary thyroid carcinoma based on network pharmacology and experiment verification.
PMID:34164500
Identification and Validation of a Novel Prognosis Prediction Model in Adrenocortical Carcinoma by Integrative Bioinformatics Analysis, Statistics, and Machine Learning.
PMID:34164395
Anticancer gold(iii)-bisphosphine complex alters the mitochondrial electron transport chain to induce in vivo tumor inhibition.
PMID:34163837
Integrated network analysis identifying potential novel drug candidates and targets for Parkinson's disease.
PMID:34162989
Long-chain saturated fatty acids in breast milk are associated with the pathogenesis of atopic dermatitis via induction of inflammatory ILC3s.
PMID:34162906
Differences in molecular phenotype in mouse and human hypertrophic cardiomyopathy.
PMID:34162896
The brain transcriptome of the wolf spider, Schizocosa ocreata.
PMID:34162407
Genome-wide association study of signature genetic alterations among pseudomonas aeruginosa cystic fibrosis isolates.
PMID:34161396
Soil metabolome response to whole-ecosystem warming at the Spruce and Peatland Responses under Changing Environments experiment.
PMID:34161254
Sea-Ice Bacteria Halomonas sp. Strain 363 and Paracoccus sp. Strain 392 Produce Multiple Types of Poly-3-Hydroxyalkaonoic Acid (PHA) Storage Polymers at Low Temperature.
PMID:34160268
Long-term disease control and survival observed after stereotactic ablative body radiotherapy for oligometastatic breast cancer.
PMID:34159748
Evolving scenario of big data and Artificial Intelligence (AI) in drug discovery.
PMID:34159484
Genome-wide expression and network analyses of mutants in key brassinosteroid signaling genes.
PMID:34157989
Full-length transcriptome analysis provides new insights into the early bolting occurrence in medicinal Angelica sinensis.
PMID:34155325
Disentangling transcriptional responses in plant defense against arthropod herbivores.
PMID:34155286
The risk of pancreatic adenocarcinoma following SARS-CoV family infection.
PMID:34155232
Niche adaptation promoted the evolutionary diversification of tiny ocean predators.
PMID:34155140
Microbiomes attached to fresh perennial ryegrass are temporally resilient and adapt to changing ecological niches.
PMID:34154659
Network-based systems pharmacology reveals heterogeneity in LCK and BCL2 signaling and therapeutic sensitivity of T-cell acute lymphoblastic leukemia.
PMID:34151288
An integrative analysis of genome-wide 5-hydroxymethylcytosines in circulating cell-free DNA detects noninvasive diagnostic markers for gliomas.
PMID:34151267
Analysis of differentially expressed genes responsible for the suppressive effect of anisomycin on cell proliferation of DLD-1 cells.
PMID:34151031
Tailoring strain construction strategies for muconic acid production in S. cerevisiae and E. coli.
PMID:34150501
An SNP Mutation of Gene RsPP Converts Petal Color From Purple to White in Radish (Raphanus sativus L.).
PMID:34149748
Analysis of Two SusE-Like Enzymes From Bacteroides thetaiotaomicron Reveals a Potential Degradative Capacity for This Protein Family.
PMID:34149636
A Chromosome-Level Genome Assembly of the Spotted Scat (Scatophagus argus).
PMID:34146395
Comprehensive transcriptome and metabolome profiling reveal metabolic mechanisms of Nitraria sibirica Pall. to salt stress.
PMID:34145354
A chromosome-level genome assembly of rugged rose (Rosa rugosa) provides insights into its evolution, ecology, and floral characteristics.
PMID:34145222
A Novel Metric to Quantify the Effect of Pathway Enrichment Evaluation With Respect to Biomedical Text-Mined Terms: Development and Feasibility Study.
PMID:34142969
Low CLOCK and CRY2 in 2nd trimester human maternal blood and risk of preterm birth: a nested case-control study†.
PMID:34142702
Molecular docking-aided identification of small molecule inhibitors targeting β-catenin-TCF4 interaction.
PMID:34142050
Somatic mutation subtypes of lung adenocarcinoma in East Asian reveal divergent biological characteristics and therapeutic vulnerabilities.
PMID:34142036
Prickle morphogenesis in rose is coupled with secondary metabolite accumulation and governed by canonical MBW transcriptional complex.
PMID:34142001
Photoperiodically driven transcriptome-wide changes in the hypothalamus reveal transcriptional differences between physiologically contrasting seasonal life-history states in migratory songbirds.
PMID:34140553
MolDiscovery: learning mass spectrometry fragmentation of small molecules.
PMID:34140479
Transcriptomic analyses of gastrulation-stage mouse embryos with differential susceptibility to alcohol.
PMID:34137816
Identification of Genes Related to Immune Infiltration in the Tumor Microenvironment of Cutaneous Melanoma.
PMID:34136377
Herbaspirillum seropedicae strain HRC54 expression profile in response to sugarcane apoplastic fluid.
PMID:34136329
Combination of network and molecule structure accurately predicts competitive inhibitory interactions.
PMID:34136091
Comparative Analysis of MicroRNA Expression Profiles Between Skeletal Muscle- and Adipose-Derived Exosomes in Pig.
PMID:34135937
Host-Parasite Interaction of Atlantic salmon (Salmo salar) and the Ectoparasite Neoparamoeba perurans in Amoebic Gill Disease.
PMID:34135900
Transcriptomic Signature Differences Between SARS-CoV-2 and Influenza Virus Infected Patients.
PMID:34135895
The nearly complete genome of Ginkgo biloba illuminates gymnosperm evolution.
PMID:34135482
Triple RNA-Seq characterizes aphid gene expression in response to infection with unequally virulent strains of the endosymbiont Hamiltonella defensa.
PMID:34134631
Transcriptomics of type 2 diabetic and healthy human neutrophils.
PMID:34134627
SARS-CoV-2 mutations altering regulatory properties: Deciphering host's and virus's perspectives.
PMID:34131596
Potential prognostic markers and significant lncRNA-mRNA co-expression pairs in laryngeal squamous cell carcinoma.
PMID:34131588
Deficiency of myostatin protects skeletal muscle cells from ischemia reperfusion injury.
PMID:34131275
Lipidomic profiling of the developing kernel clarifies the lipid metabolism of Paeonia ostii.
PMID:34131230
Inferring transcriptomic cell states and transitions only from time series transcriptome data.
PMID:34131182
Microglia RAGE exacerbates the progression of neurodegeneration within the SOD1G93A murine model of amyotrophic lateral sclerosis in a sex-dependent manner.
PMID:34130712
Cytokinins initiate secondary growth in the Arabidopsis root through a set of LBD genes.
PMID:34129827
Doxycycline host-directed therapy in human pulmonary tuberculosis.
PMID:34128838
Unique phage-bacterium interplay in sponge holobionts from the southern Okinawa Trough hydrothermal vent.
PMID:34128329
Interaction Between the Intestinal Microbial Community and Transcriptome Profile in Common Carp (Cyprinus carpio L.).
PMID:34127924
Genome-wide CRISPR screen identifies protein pathways modulating tau protein levels in neurons.
PMID:34127790
Meta-analysis of gene signatures and key pathways indicates suppression of JNK pathway as a regulator of chemo-resistance in AML.
PMID:34127725
Population-scale peach genome analyses unravel selection patterns and biochemical basis underlying fruit flavor.
PMID:34127667
Utilizing single-cell RNA sequencing for analyzing the characteristics of PBMC in patients with Kawasaki disease.
PMID:34126969
Diversity and metagenome analysis of a hydrocarbon-degrading bacterial consortium from asphalt lakes located in Wietze, Germany.
PMID:34125309
Gene Instability-Related lncRNA Prognostic Model of Melanoma Patients via Machine Learning Strategy.
PMID:34122546
Based on Plasma Metabonomics and Network Pharmacology Exploring the Therapeutic Mechanism of Gynura procumbens on Type 2 Diabetes.
PMID:34122100
Network Pharmacology-Based Validation of the Efficacy of Huiyangjiuji Decoction in the Treatment of Experimental Colitis.
PMID:34122086
De novo genome assembly of a foxtail millet cultivar Huagu11 uncovered the genetic difference to the cultivar Yugu1, and the genetic mechanism of imazethapyr tolerance.
PMID:34118890
β-elemene alleviates airway stenosis via the ILK/Akt pathway modulated by MIR143HG sponging miR-1275.
PMID:34118875
Circulating microRNA profile in humans and mice with congenital GH deficiency.
PMID:34118183
Revealing the Modular Similarities and Differences Among Alzheimer's Disease, Vascular Dementia, and Parkinson's Disease in Genomic Networks.
PMID:34117614
Melatonin influences the early growth stage in Zoysia japonica Steud. by regulating plant oxidation and genes of hormones.
PMID:34117332
Novel clades of soil biphenyl degraders revealed by integrating isotope probing, multi-omics, and single-cell analyses.
PMID:34117322
Multiple functions of reversine on the biological characteristics of sheep fibroblasts.
PMID:34117304
Drug target gene-based analyses of drug repositionability in rare and intractable diseases.
PMID:34117295
Investigation of monogenic causes of familial breast cancer: data from the BEACCON case-control study.
PMID:34117267
Genomic adaptations enabling Acidithiobacillus distribution across wide-ranging hot spring temperatures and pHs.
PMID:34116726
Age related gene DST represents an independent prognostic factor for MYCN non-amplified neuroblastoma.
PMID:34116676
CCDC114, DNAI2 and TOP2A involves in the effects of tibolone treatment on postmenopausal endometrium.
PMID:34116668
Genome analysis to decipher syntrophy in the bacterial consortium 'SCP' for azo dye degradation.
PMID:34116639
Transcriptome analysis of Cinnamomum migao seed germination in medicinal plants of Southwest China.
PMID:34116632
netgsa: Fast computation and interactive visualization for topology-based pathway enrichment analysis.
PMID:34115744
Measuring pathway database coverage of the phosphoproteome.
PMID:34113485
Transcriptome Profile Analysis of Arabidopsis Reveals the Drought Stress-Induced Long Non-coding RNAs Associated With Photosynthesis, Chlorophyll Synthesis, Fatty Acid Synthesis and Degradation.
PMID:34113361
Host specific endophytic microbiome diversity and associated functions in three varieties of scented black rice are dependent on growth stage.
PMID:34112830
Integrated proteomic and transcriptomic profiling identifies aberrant gene and protein expression in the sarcomere, mitochondrial complex I, and the extracellular matrix in Warmblood horses with myofibrillar myopathy.
PMID:34112090
A meta-analysis of transcriptomic profiles of Huntington's disease patients.
PMID:34111223
A novel role of ADGRF1 (GPR110) in promoting cellular quiescence and chemoresistance in human epidermal growth factor receptor 2-positive breast cancer.
PMID:34110646
Functional prediction of environmental variables using metabolic networks.
PMID:34108539
Transcriptome and metabolome analyses revealing the potential mechanism of seed germination in Polygonatum cyrtonema.
PMID:34108536
Central nervous system (CNS) transcriptomic correlates of human immunodeficiency virus (HIV) brain RNA load in HIV-infected individuals.
PMID:34108514
Overexpression of DDIT4 and TPTEP1 are associated with metastasis and advanced stages in colorectal cancer patients: a study utilizing bioinformatics prediction and experimental validation.
PMID:34107956
SARS-CoV-2 infection activates a subset of intrinsic pathways to inhibit type I interferons in vitro and in vivo.
PMID:34104087
A defective interleukin-17 receptor A1 causes weight loss and intestinal metabolism-related gene downregulation in Japanese medaka, Oryzias latipes.
PMID:34103614
Tumor metabolism and associated serum metabolites define prognostic subtypes of Asian hepatocellular carcinoma.
PMID:34103600
Integrating longitudinal clinical laboratory tests with targeted proteomic and transcriptomic analyses reveal the landscape of host responses in COVID-19.
PMID:34103487
Effects of FUdR on gene expression in the C. elegans bacterial diet OP50.
PMID:34103088
Molecular omics resources should require sex annotation: a call for action.
PMID:34099934
Identifying molecular pathways and candidate genes associated with knob traits by transcriptome analysis in the goose (Anser cygnoides).
PMID:34099774
Predicting anticancer hyperfoods with graph convolutional networks.
PMID:34099048
Characterization of terminal-ileal and colonic Crohn's disease in treatment-naïve paediatric patients based on transcriptomic profile using logistic regression.
PMID:34098982
Integrated proteomics and metabolomics analysis of transgenic and gene-stacked maize line seeds.
PMID:34097556
Transcriptome Analysis Reveals Differentially Expressed Genes and Long Non-coding RNAs Associated With Fecundity in Sheep Hypothalamus With Different FecB Genotypes.
PMID:34095109
Cancer cell-selective modulation of mitochondrial respiration and metabolism by potent organogold(iii) dithiocarbamates.
PMID:34094305
PredTAD: A machine learning framework that models 3D chromatin organization alterations leading to oncogene dysregulation in breast cancer cell lines.
PMID:34093998
Galectin-9 and PSMB8 overexpression predict unfavorable prognosis in patients with AML.
PMID:34093826
Comprehensive evaluation of microRNA-10b in digestive system cancers reveals prognostic implication and signaling pathways associated with tumor progression.
PMID:34093806
Comparing Statistical Tests for Differential Network Analysis of Gene Modules.
PMID:34093641
Differentially Expressed Genes and Enriched Signaling Pathways in the Adipose Tissue of Obese People.
PMID:34093637
Azohydromonas caseinilytica sp. nov., a Nitrogen-Fixing Bacterium Isolated From Forest Soil by Using Optimized Culture Method.
PMID:34093463
Cold-shock gene cspC in the genome of Massilia polaris sp. nov. revealed cold-adaptation.
PMID:34091798
Construction of a prognostic model with histone modification-related genes and identification of potential drugs in pancreatic cancer.
PMID:34090418
Exposure to hypoxia causes stress erythropoiesis and downregulates immune response genes in spleen of mice.
PMID:34090336
TMT-based quantitative proteomics analysis reveals the key proteins related with the differentiation process of goat intramuscular adipocytes.
PMID:34090334
First dynamics of bacterial community during development of Acropora humilis larvae in aquaculture.
PMID:34083731
High-resolution metabolomic biomarkers for lung cancer diagnosis and prognosis.
PMID:34083687
Superior production of heavy pamamycin derivatives using a bkdR deletion mutant of Streptomyces albus J1074/R2.
PMID:34082758
Post-diapause transcriptomic restarts: insight from a high-latitude copepod.
PMID:34082716
Construction of a novel mRNA-miRNA-lncRNA network and identification of potential regulatory axis associated with prognosis in colorectal cancer liver metastases.
PMID:34081622
Eleven genomic loci affect plasma levels of chronic inflammation marker soluble urokinase-type plasminogen activator receptor.
PMID:34079037
Rootstock effects on scion gene expression in maritime pine.
PMID:34078936
Complete genome sequence of Arthrobacter sp. PAMC25564 and its comparative genome analysis for elucidating the role of CAZymes in cold adaptation.
PMID:34078272
Integrative Analysis of Colonic Biopsies from Inflammatory Bowel Disease Patients Identifies an Interaction Between Microbial Bile Acid-inducible Gene Abundance and Human Angiopoietin-like 4 Gene Expression.
PMID:34077506
Identification of biomarkers, pathways and potential therapeutic target for docetaxel resistant prostate cancer.
PMID:34077304
noisyR: enhancing biological signal in sequencing datasets by characterizing random technical noise.
PMID:34076236
Chromosome-level genome assembly of the Chinese longsnout catfish Leiocassis longirostris.
PMID:34075735
Comparative analysis of tuberous root metabolites between cultivated and wild varieties of Rehmannia glutinosa by widely targeted metabolomics.
PMID:34075137
Comparative analyses of transcriptional responses of Dectes texanus LeConte (Coleoptera: Cerambycidae) larvae fed on three different host plants and artificial diet.
PMID:34075134
Comparative transcriptome analysis reveals key genes associated with pigmentation in radish (Raphanus sativus L.) skin and flesh.
PMID:34075070
A novel ferroptosis related gene signature is associated with prognosis in patients with ovarian serous cystadenocarcinoma.
PMID:34075060
The C0-C1f Region of Cardiac Myosin Binding Protein-C Induces Pro-Inflammatory Responses in Fibroblasts via TLR4 Signaling.
PMID:34073556
Genetic Predisposition to the Mortality in Septic Shock Patients: From GWAS to the Identification of a Regulatory Variant Modulating the Activity of a CISH Enhancer.
PMID:34072601
Electroretinography and Gene Expression Measures Implicate Phototransduction and Metabolic Shifts in Chick Myopia and Hyperopia Models.
PMID:34072440
Global Transcriptional Response of Aspergillus niger to Blocked Active Citrate Export through Deletion of the Exporter Gene.
PMID:34071072
Propionate Fermentative Genes of the Gut Microbiome Decrease in Inflammatory Bowel Disease.
PMID:34070019
Taxonomic and Gene Category Analyses of Subgingival Plaques from a Group of Japanese Individuals with and without Periodontitis.
PMID:34069916
Genome-Wide Association Study Provides Insights into Important Genes for Reproductive Traits in Nelore Cattle.
PMID:34068162
Lupeol Accumulation Correlates with Auxin in the Epidermis of Castor.
PMID:34067825
Pan-Genome Analysis Reveals Host-Specific Functional Divergences in Burkholderia gladioli.
PMID:34067383
Identification of Critical Genes and Signaling Pathways in Human Monocytes Following High-Intensity Exercise.
PMID:34067297
Integrating Transcriptome and Coexpression Network Analyses to Characterize Salicylic Acid- and Jasmonic Acid-Related Genes in Tolerant Poplars Infected with Rust.
PMID:34066822
Western Diet Induced Remodelling of the Tongue Proteome.
PMID:34066295
Epigenetic Alterations of Maternal Tobacco Smoking during Pregnancy: A Narrative Review.
PMID:34064931
Small-RNA Sequencing Reveals Altered Skeletal Muscle microRNAs and snoRNAs Signatures in Weanling Male Offspring from Mouse Dams Fed a Low Protein Diet during Lactation.
PMID:34064819
Prophage Genomics and Ecology in the Family Rhodobacteraceae.
PMID:34064105
Nucleoporin TPR Affects C2C12 Myogenic Differentiation via Regulation of Myh4 Expression.
PMID:34063931
Genome-Wide Analysis of Sex Disparities in the Genetic Architecture of Lung and Colorectal Cancers.
PMID:34062886
Expanded transcriptomic view of strawberry fruit ripening through meta-analysis.
PMID:34061906
Molecular characteristics and tumorigenicity of ascites-derived tumor cells: mitochondrial oxidative phosphorylation as a novel therapy target in ovarian cancer.
PMID:34060699
Proteomics analysis reveals the effect of 1α,25(OH)2VD3-glycosides on development of early testes in piglets.
PMID:34059707
The chromosome-level Stevia genome provides insights into steviol glycoside biosynthesis.
PMID:34059662
Gaining Insights Into Metabolic Networks Using Chemometrics and Bioinformatics: Chronic Kidney Disease as a Clinical Model.
PMID:34055893
Lipidomic and Transcriptomic Analysis of the Longissimus Muscle of Luchuan and Duroc Pigs.
PMID:34055857
MicroRNA panel in serum reveals novel diagnostic biomarkers for prostate cancer.
PMID:34055487
Progesterone Dampens Immune Responses in In Vitro Activated CD4+ T Cells and Affects Genes Associated With Autoimmune Diseases That Improve During Pregnancy.
PMID:34054852
Identifying Subgroups of Patients With Autism by Gene Expression Profiles Using Machine Learning Algorithms.
PMID:34054599
Multi-Dimensional Transcriptome Analysis Reveals Modulation of Cholesterol Metabolism as Highly Integrated Response to Brain Injury.
PMID:34054419
A 3D Fiber-Hydrogel Based Non-Viral Gene Delivery Platform Reveals that microRNAs Promote Axon Regeneration and Enhance Functional Recovery Following Spinal Cord Injury.
PMID:34050637
Proteotyping of knockout mouse strains reveals sex- and strain-specific signatures in blood plasma.
PMID:34050187
CRISPR/Cas9 mediated deletion of the adenosine A2A receptor enhances CAR T cell efficacy.
PMID:34050151
In Situ Localization of Plant Lipid Metabolites by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Imaging (MALDI-MSI).
PMID:34047991
Exome sequencing of early-onset patients supports genetic heterogeneity in colorectal cancer.
PMID:34045552
Glycoproteomic analysis of the changes in protein N-glycosylation during neuronal differentiation in human-induced pluripotent stem cells and derived neuronal cells.
PMID:34045517
Transcriptomic insights into the effects of CytCo, a novel nematotoxic protein, on the pine wood nematode Bursaphelenchus xylophilus.
PMID:34044778
Using Interpretable Deep Learning to Model Cancer Dependencies.
PMID:34042953
Transcriptional signatures of human peripheral blood mononuclear cells can identify the risk of tuberculosis progression from latent infection among individuals with silicosis.
PMID:34042560
An Immunometabolic Shift Modulates Cytotoxic Lymphocyte Activation During Melanoma Progression in TRPA1 Channel Null Mice.
PMID:34041030
Loss of 15-lipoxygenase disrupts Treg differentiation altering their pro-resolving functions.
PMID:34040168
Comprehensive profiling analysis of the N6-methyladenosine-modified circular RNA transcriptome in cultured cells infected with Marek's disease virus.
PMID:34040106
In Arabidopsis thaliana Cd differentially impacts on hormone genetic pathways in the methylation defective ddc mutant compared to wild type.
PMID:34040101
The carbon source-dependent pattern of antimicrobial activity and gene expression in Pseudomonas donghuensis P482.
PMID:34040089
Common pathways and functional profiles reveal underlying patterns in Breast, Kidney and Lung cancers.
PMID:34039407
Identification of significant genes as prognostic markers and potential tumor suppressors in lung adenocarcinoma via bioinformatical analysis.
PMID:34039311
Evaluation of clinical value and potential mechanism of MTFR2 in lung adenocarcinoma via bioinformatics.
PMID:34039308
A spatial vascular transcriptomic, proteomic, and phosphoproteomic atlas unveils an angiocrine Tie-Wnt signaling axis in the liver.
PMID:34038707
Aviator: a web service for monitoring the availability of web services.
PMID:34038559
Transcriptome analysis unveils survival strategies of Streptococcus parauberis against fish serum.
PMID:34038483
CPA: a web-based platform for consensus pathway analysis and interactive visualization.
PMID:34037798
Broad Concordance in the Spatial Distribution of Adaptive and Neutral Genetic Variation across an Elevational Gradient in Deer Mice.
PMID:34037784
The Potential Genes Mediate the Pathogenicity of Allogeneic CD4+T Cell in aGVHD Mouse Model.
PMID:34036106
Differential gene expression profile by RNA sequencing study of elderly osteoporotic hip fracture patients with sarcopenia.
PMID:34036042
Integrated RNA and miRNA sequencing analysis reveals a complex regulatory network of Magnolia sieboldii seed germination.
PMID:34035372
PhenCards: a data resource linking human phenotype information to biomedical knowledge.
PMID:34034817
Transcriptome analysis of potential candidate genes and molecular pathways in colitis-associated colorectal cancer of Mkp-1-deficient mice.
PMID:34034704
Niche specificity and functional diversity of the bacterial communities associated with Ginkgo biloba and Panax quinquefolius.
PMID:34031502
Health monitoring in birds using bio-loggers and whole blood transcriptomics.
PMID:34031452
Transcriptomic and metabolomic characterization of post-hatch metabolic reprogramming during hepatic development in the chicken.
PMID:34030631
driveR: a novel method for prioritizing cancer driver genes using somatic genomics data.
PMID:34030627
Identification of a Hypoxia-Related Signature for Predicting Prognosis and the Immune Microenvironment in Bladder Cancer.
PMID:34026819
Analysis of decomposition in 23 seafood products by liquid chromatography with high-resolution mass spectrometry with sensory-driven modeling.
PMID:34026079
Genome sequence and transcriptome profiles of pathogenic fungus Paecilomyces penicillatus reveal its interactions with edible fungus Morchella importuna.
PMID:34025947
IDO1 Expression in Ovarian Cancer Induces PD-1 in T Cells via Aryl Hydrocarbon Receptor Activation.
PMID:34025677
Meanders as a scaling motif for understanding of floodplain soil microbiome and biogeochemical potential at the watershed scale.
PMID:34022966
Up-regulated RFC2 predicts unfavorable progression in hepatocellular carcinoma.
PMID:34022962
A comparative analysis of the intrauterine transcriptome in fertile and subfertile mares using cytobrush sampling.
PMID:34022808
Transcriptome analysis reveals potential function of long non-coding RNAs in 20-hydroxyecdysone regulated autophagy in Bombyx mori.
PMID:34022797
Deep ocean metagenomes provide insight into the metabolic architecture of bathypelagic microbial communities.
PMID:34021239
Common DNA methylation dynamics in endometriod adenocarcinoma and glioblastoma suggest universal epigenomic alterations in tumorigenesis.
PMID:34021236
Multiscale-omic assessment of EWSR1-NFATc2 fusion positive sarcomas identifies the mTOR pathway as a potential therapeutic target.
PMID:34021224
Meta-omics Reveal Gallionellaceae and Rhodanobacter Species as Interdependent Key Players for Fe(II) Oxidation and Nitrate Reduction in the Autotrophic Enrichment Culture KS.
PMID:34020935
The gutSMASH web server: automated identification of primary metabolic gene clusters from the gut microbiota.
PMID:34019648
Rcl1 depletion impairs 18S pre-rRNA processing at the A1-site and up-regulates a cohort of ribosome biogenesis genes in zebrafish.
PMID:34019640
Ultra-high Magnification Endocytoscopy and Molecular Markers for Defining Endoscopic and Histologic Remission in Ulcerative Colitis-An Exploratory Study to Define Deep Remission.
PMID:34019073
Upregulated functional gene expression programmes in tumour pericytes mark progression in patients with low-grade glioma.
PMID:34018679
Identification of potential diagnostic and prognostic biomarkers for LUAD based on TCGA and GEO databases.
PMID:34017995
Evaluation of Quantitative Structure Property Relationship Algorithms for Predicting Plasma Protein Binding in Humans.
PMID:34017929
The Zinc Nutritional Immunity of Epinephelus coioides Contributes to the Importance of znuC During Pseudomonas plecoglossicida Infection.
PMID:34017347
Genome-Wide Transcriptional Responses of Marine Nematode Litoditis marina to Hyposaline and Hypersaline Stresses.
PMID:34017268
Whole transcriptome RNA-seq reveals key regulatory factors involved in type 2 diabetes pathology in peripheral fat of Asian Indians.
PMID:34017037
Examination of gender differences in patients with takotsubo syndrome according to left ventricular biopsy: two case reports.
PMID:34016184
Platelets orchestrate the resolution of pulmonary inflammation in mice by T reg cell repositioning and macrophage education.
PMID:34014253
Targeted 16S rRNA gene and ITS2 amplicon sequencing of leaf and spike tissues of Piper longum identifies new candidates for bioprospecting of bioactive compounds.
PMID:34013420
The protective effect and mechanism of epidermal growth factor on necrotizing enterocolitis in a neonatal rat model.
PMID:34012839
Genome variation in colorectal cancer patient with liver metastasis measured by whole-exome sequencing.
PMID:34012644
Midgut bacterial diversity of a leaf-mining beetle, Dactylispa xanthospila (Gestro) (Coleoptera: Chrysomelidae: Cassidinae).
PMID:34012315
PIF4 negatively modulates cold tolerance in tomato anthers via temperature-dependent regulation of tapetal cell death.
PMID:34009394
DNA Methylation in Babies Born to Nonsmoking Mothers Exposed to Secondhand Smoke during Pregnancy: An Epigenome-Wide Association Study.
PMID:34009014
Sex-specific nicotine sensitization and imprinting of self-administration in rats inform GWAS findings on human addiction phenotypes.
PMID:34007041
A general non-self response as part of plant immunity.
PMID:34007033
Next-generation sequencing revealed recurrent ZFPM1 mutations in encapsulated papillary carcinoma of the breast.
PMID:34007008
Revealing the developmental dynamics in male strobilus transcriptome of Gnetum luofuense using nanopore sequencing technology.
PMID:34006996
De novo transcriptome assembly and comparative transcriptomic analysis provide molecular insights into low temperature stress response of Canarium album.
PMID:34006894
De novo genome assembly and analysis unveil biosynthetic and metabolic potentials of Pseudomonas fragi A13BB.
PMID:34006216
Analyzing host-viral interactome of SARS-CoV-2 for identifying vulnerable host proteins during COVID-19 pathogenesis.
PMID:34004362
An overview of graph databases and their applications in the biomedical domain.
PMID:34003247
Alternative splicing acts as an independent prognosticator in ovarian carcinoma.
PMID:34001978
Identification of targets of JS-K against HBV-positive human hepatocellular carcinoma HepG2.2.15 cells with iTRAQ proteomics.
PMID:34001947
RcTGA1 and glucosinolate biosynthesis pathway involvement in the defence of rose against the necrotrophic fungus Botrytis cinerea.
PMID:34001006
Impairment of the ER/mitochondria compartment in human cardiomyocytes with PLN p.Arg14del mutation.
PMID:33998164
Evaluating the Consistency of Gene Methylation in Liver Cancer Using Bisulfite Sequencing Data.
PMID:33996828
Transcriptome Analyses Reveal IL6/Stat3 Signaling Involvement in Radial Glia Proliferation After Stab Wound Injury in the Adult Zebrafish Optic Tectum.
PMID:33996824
Genomic and Transcriptomic Investigation of the Physiological Response of the Methylotroph Bacillus methanolicus to 5-Aminovalerate.
PMID:33995329
Metagenomic Insights Into Functional and Taxonomic Compositions of an Activated Sludge Microbial Community Treating Leachate of a Completed Landfill: A Pathway-Based Analysis.
PMID:33995301
Network Pharmacology-Based Strategy for Elucidating the Molecular Basis Forthe Pharmacologic Effects of Licorice (Glycyrrhiza spp.).
PMID:33995004
β-Arrestin2 Inhibits the Apoptosis and Facilitates the Proliferation of Fibroblast-like Synoviocytes in Diffuse-type Tenosynovial Giant Cell Tumor.
PMID:33994368
Structure-based drug repurposing against COVID-19 and emerging infectious diseases: methods, resources and discoveries.
PMID:33993214
Long non-coding RNAs and their targets as potential biomarkers in breast cancer.
PMID:33991433
Transcriptome analysis of ovary tissues from low- and high-yielding Changshun green-shell laying hens.
PMID:33990173
Transcriptomic Analysis of Skin Color in Anole Lizards.
PMID:33988681
An Ensemble Learning-Based Method for Inferring Drug-Target Interactions Combining Protein Sequences and Drug Fingerprints.
PMID:33987446
Centromere protein N may be a novel malignant prognostic biomarker for hepatocellular carcinoma.
PMID:33987018
Transcriptome profiling of Capsicum annuum using Illumina- and PacBio SMRT-based RNA-Seq for in-depth understanding of genes involved in trichome formation.
PMID:33986344
Thymic transcriptome analysis after Newcastle disease virus inoculation in chickens and the influence of host small RNAs on NDV replication.
PMID:33986327
Metabolic classification of bladder cancer based on multi-omics integrated analysis to predict patient prognosis and treatment response.
PMID:33985530
Exploring genetic resistance to infectious salmon anaemia virus in Atlantic salmon by genome-wide association and RNA sequencing.
PMID:33985436
Deconvolution of sarcoma methylomes reveals varying degrees of immune cell infiltrates with association to genomic aberrations.
PMID:33980253
A comprehensive RNA-Seq-based gene expression atlas of the summer squash (Cucurbita pepo) provides insights into fruit morphology and ripening mechanisms.
PMID:33980145
Prediction and analysis of novel key genes ITGAX, LAPTM5, SERPINE1 in clear cell renal cell carcinoma through bioinformatics analysis.
PMID:33976979
Overcoming false-positive gene-category enrichment in the analysis of spatially resolved transcriptomic brain atlas data.
PMID:33976144
Spinal Cord Injury Changes the Structure and Functional Potential of Gut Bacterial and Viral Communities.
PMID:33975974
Rapid Response of Nitrogen Cycling Gene Transcription to Labile Carbon Amendments in a Soil Microbial Community.
PMID:33975966
Human and preclinical studies of the host-gut microbiome co-metabolite hippurate as a marker and mediator of metabolic health.
PMID:33975870
The genome of Nautilus pompilius illuminates eye evolution and biomineralization.
PMID:33972735
Pests, diseases, and aridity have shaped the genome of Corymbia citriodora.
PMID:33972666
Development of genic SSR marker resources from RNA-seq data in Camellia japonica and their application in the genus Camellia.
PMID:33972624
The transcriptional landscape analysis of basal cell carcinomas reveals novel signalling pathways and actionable targets.
PMID:33972406
Discovery and validation of novel protein markers in mucosa of portal hypertensive gastropathy.
PMID:33971821
Transcriptomic analysis reveals pronounced changes in gene expression due to sub-lethal pyrethroid exposure and ageing in insecticide resistance Anopheles coluzzii.
PMID:33971808
Integrative-omics for discovery of network-level disease biomarkers: a case study in Alzheimer's disease.
PMID:33971669
Knowledge bases and software support for variant interpretation in precision oncology.
PMID:33971666
A model of dopamine and serotonin-kynurenine metabolism in cortisolemia: Implications for depression.
PMID:33970902
Genome-Wide Changes of Regulatory Non-Coding RNAs Reveal Pollen Development Initiated at Ecodormancy in Peach.
PMID:33968979
Predict Colon Cancer by Pairing Plasma miRNAs: Establishment of a Normalizer-Free, Cross-Platform Model.
PMID:33968711
Circular RNA expression profiles in the plasma of patients with infantile hemangioma determined using microarray analysis.
PMID:33968165
CBP-JMF: An Improved Joint Matrix Tri-Factorization Method for Characterizing Complex Biological Processes of Diseases.
PMID:33968140
A Population-Specific Major Allele Reference Genome From The United Arab Emirates Population.
PMID:33968136
Medicago sativa and Medicago truncatula Show Contrasting Root Metabolic Responses to Drought.
PMID:33968107
Harnessing the Potential of Native Microbial Communities for Bioremediation of Oil Spills in the Iberian Peninsula NW Coast.
PMID:33967978
Evidence for Selection in the Abundant Accessory Gene Content of a Prokaryote Pangenome.
PMID:33963386
Integration of peripheral transcriptomics, genomics, and interactomics following trauma identifies causal genes for symptoms of post-traumatic stress and major depression.
PMID:33963278
Genome-wide association studies of grain quality traits in maize.
PMID:33963265
Cold-induction of afadin in brown fat supports its thermogenic capacity.
PMID:33963248
A candidate gene identified in converting platycoside E to platycodin D from Platycodon grandiflorus by transcriptome and main metabolites analysis.
PMID:33963244
Ubiquitin-mediated DNA damage response is synthetic lethal with G-quadruplex stabilizer CX-5461.
PMID:33963218
Elevated dimethylarginine, ATP, cytokines, metabolic remodeling involving tryptophan metabolism and potential microglial inflammation characterize primary open angle glaucoma.
PMID:33963197
CXCL1 Clone Evolution Induced by the HDAC Inhibitor Belinostat Might Be a Favorable Prognostic Indicator in Triple-Negative Breast Cancer.
PMID:33959656
Neuronal ApoE upregulates MHC-I expression to drive selective neurodegeneration in Alzheimer's disease.
PMID:33958804
An integrative network analysis framework for identifying molecular functions in complex disorders examining major depressive disorder as a test case.
PMID:33958659
Metabolomic and phenotypic implications of the application of fertilization products containing microcontaminants in lettuce (Lactuca sativa).
PMID:33958645
Histological and transcriptomic analysis of adipose and muscle of dairy calves supplemented with 5-hydroxytryptophan.
PMID:33958639
Computational study of zebrafish immune-targeted microarray data for prediction of preventive drug candidates.
PMID:33953878
Ecologically coherent population structure of uncultivated bacterioplankton.
PMID:33953362
Association of urinary ketamine and APOA1 levels with bladder dysfunction in ketamine abusers revealed via proteomics and targeted metabolite analyses.
PMID:33953300
Network pharmacology approach to decipher signaling pathways associated with target proteins of NSAIDs against COVID-19.
PMID:33953223
A data-independent acquisition-based global phosphoproteomics system enables deep profiling.
PMID:33953186
Potential role of indolelactate and butyrate in multiple sclerosis revealed by integrated microbiome-metabolome analysis.
PMID:33948576
Particulate Metabolites and Transcripts Reflect Diel Oscillations of Microbial Activity in the Surface Ocean.
PMID:33947808
Predicted Metabolic Function of the Gut Microbiota of Drosophila melanogaster.
PMID:33947801
Metabolic Profiling of VOCs Emitted by Bacteria Isolated from Pressure Ulcers and Treated with Different Concentrations of Bio-AgNPs.
PMID:33946710
Integrative Systems Biology Approaches to Identify Potential Biomarkers and Pathways of Cervical Cancer.
PMID:33946372
Untargeted metabolomics for uncovering plasma biological markers of wet age-related macular degeneration.
PMID:33946050
3D heterospecies spheroids of pancreatic stroma and cancer cells demonstrate key phenotypes of pancreatic ductal adenocarcinoma.
PMID:33946033
Longitudinal virological changes and underlying pathogenesis in hospitalized COVID-19 patients in Guangzhou, China.
PMID:33945070
Integrating taxonomic, functional, and strain-level profiling of diverse microbial communities with bioBakery 3.
PMID:33944776
Microbial iron and carbon metabolism as revealed by taxonomy-specific functional diversity in the Southern Ocean.
PMID:33941887
Comparative transcriptome analysis of cells from different areas reveals ROS responsive mechanism at sclerotial initiation stage in Morchella importuna.
PMID:33941791
Prognostic relevance of the hexosamine biosynthesis pathway activation in leiomyosarcoma.
PMID:33941787
COVID-19-related anosmia is associated with viral persistence and inflammation in human olfactory epithelium and brain infection in hamsters.
PMID:33941622
Anna Karenina and the subgingival microbiome associated with periodontitis.
PMID:33941275
Genomic analysis of novel Yarrowia-like yeast symbionts associated with the carrion-feeding burying beetle Nicrophorus vespilloides.
PMID:33941076
RIP1 Perturbation Induces Chondrocyte Necroptosis and Promotes Osteoarthritis Pathogenesis via Targeting BMP7.
PMID:33937236
Transcriptome Based Estrogen Related Genes Biomarkers for Diagnosis and Prognosis in Non-small Cell Lung Cancer.
PMID:33936178
Comparative Small RNA Profiling and Functional Exploration on Wheat With High- and Low-Cadmium Accumulation.
PMID:33936166
Genome-Wide Gene Expression Analysis of Mtb-Infected DC Highlights the Rapamycin-Driven Modulation of Regulatory Cytokines via the mTOR/GSK-3β Axis.
PMID:33936070
Comprehensive RNA-Seq Analysis of Potential Therapeutic Targets of Gan-Dou-Fu-Mu Decoction for Treatment of Wilson Disease Using a Toxic Milk Mouse Model.
PMID:33935715
Phase 1 trial of nelfinavir added to standard cisplatin chemotherapy with concurrent pelvic radiation for locally advanced cervical cancer.
PMID:33932031
Proteomic and phosphoproteomic profiling of shammah induced signaling in oral keratinocytes.
PMID:33931671
Identification of key pseudogenes in nasopharyngeal carcinoma based on RNA-Seq analysis.
PMID:33931030
CladeOScope: functional interactions through the prism of clade-wise co-evolution.
PMID:33928243
Machine Learning Neuroprotective Strategy Reveals a Unique Set of Parkinson Therapeutic Nicotine Analogs.
PMID:33927788
Deep Learning Enables Fast and Accurate Imputation of Gene Expression.
PMID:33927746
An Overview of Biological and Computational Methods for Designing Mechanism-Informed Anti-biofilm Agents.
PMID:33927701
Dinoflagellate symbionts escape vomocytosis by host cell immune suppression.
PMID:33927382
Best practices on the differential expression analysis of multi-species RNA-seq.
PMID:33926528
Genome-wide analyses of the relict gull (Larus relictus): insights and evolutionary implications.
PMID:33926388
Influence of Extraction Solvent on Nontargeted Metabolomics Analysis of Enrichment Reactor Cultures Performing Enhanced Biological Phosphorus Removal (EBPR).
PMID:33925970
Categorization of Orthologous Gene Clusters in 92 Ascomycota Genomes Reveals Functions Important for Phytopathogenicity.
PMID:33925458
Proteomic Charting of Imipenem Adaptive Responses in a Highly Carbapenem Resistant Clinical Enterobacter roggenkampii Isolate.
PMID:33924830
RNA-Seq Reveals Function of Bta-miR-149-5p in the Regulation of Bovine Adipocyte Differentiation.
PMID:33922274
From Proteomic Mapping to Invasion-Metastasis-Cascade Systemic Biomarkering and Targeted Drugging of Mutant BRAF-Dependent Human Cutaneous Melanomagenesis.
PMID:33922182
Connectivity Map Analysis of a Single-Cell RNA-Sequencing -Derived Transcriptional Signature of mTOR Signaling.
PMID:33922083
Analysis of LAGEs Family Gene Signature and Prognostic Relevance in Breast Cancer.
PMID:33921749
Improvement of Torulaspora delbrueckii Genome Annotation: Towards the Exploitation of Genomic Features of a Biotechnologically Relevant Yeast.
PMID:33920164
Key Disease Mechanisms Linked to Alzheimer's Disease in the Entorhinal Cortex.
PMID:33920138
Transcriptome Profiling of Cucumber (Cucumis sativus L.) Early Response to Pseudomonas syringae pv. lachrymans.
PMID:33919557
An Introduction to Next Generation Sequencing Bioinformatic Analysis in Gut Microbiome Studies.
PMID:33918473
Altered microRNA Transcriptome in Cultured Human Liver Cells upon Infection with Ebola Virus.
PMID:33917562
The Protein Interactome of Glycolysis in Escherichia coli.
PMID:33917325
Changes in Bacterial Endophyte Community Following Aspergillus flavus Infection in Resistant and Susceptible Maize Kernels.
PMID:33916873
Phylogenomic Insights into Distribution and Adaptation of Bdellovibrionota in Marine Waters.
PMID:33916768
Sphingosine Promotes Embryo Biomass in Upland Cotton: A Biochemical and Transcriptomic Analysis.
PMID:33915924
Multi-Omics Approaches to Define Calcific Aortic Valve Disease Pathogenesis.
PMID:33914608
Identification of Expression Patterns and Potential Prognostic Significance of m5C-Related Regulators in Head and Neck Squamous Cell Carcinoma.
PMID:33912441
Identification of Molecular Signatures in Mild Intrinsic Atopic Dermatitis by Bioinformatics Analysis.
PMID:33911724
Regulatory role of non-coding RNA in ginseng rusty root symptom tissue.
PMID:33911151
Adulthood blood levels of hsa-miR-29b-3p associate with preterm birth and adult metabolic and cognitive health.
PMID:33911114
Cyanophage Diversity and Community Structure in Dead Zone Sediments.
PMID:33910994
Knock out of specific maternal vitellogenins in zebrafish (Danio rerio) evokes vital changes in egg proteomic profiles that resemble the phenotype of poor quality eggs.
PMID:33910518
Erosion of human X chromosome inactivation causes major remodeling of the iPSC proteome.
PMID:33910018
Gene network and biological pathways associated with susceptibility to differentiated thyroid carcinoma.
PMID:33903625
SCD5 expression correlates with prognosis and response to neoadjuvant chemotherapy in breast cancer.
PMID:33903614
Genome-wide toxicogenomic study of the lanthanides sheds light on the selective toxicity mechanisms associated with critical materials.
PMID:33903247
Drug target ranking for glioblastoma multiforme.
PMID:33902757
Unravelling the effects of tropical land use conversion on the soil microbiome.
PMID:33902736
Tax4Fun2: prediction of habitat-specific functional profiles and functional redundancy based on 16S rRNA gene sequences.
PMID:33902725
Multi-omics integration strategies for animal epigenetic studies - A review.
PMID:33902167
Adrenal Hormone Interactions and Metabolism: A Single Sample Multi-Omics Approach.
PMID:33902135
Time-course transcriptomic analysis of Petunia ×hybrida leaves under water deficit stress using RNA sequencing.
PMID:33901201
Identification of Metastasis-Associated MicroRNAs in Metastatic Melanoma by miRNA Expression Profile and Experimental Validation.
PMID:33897771
Evolution of the Subgroup 6 R2R3-MYB Genes and Their Contribution to Floral Color in the Perianth-Bearing Piperales.
PMID:33897722
The Regulation of Adaptation to Cold and Drought Stresses in Poa crymophila Keng Revealed by Integrative Transcriptomics and Metabolomics Analysis.
PMID:33897721
Thiocyanate and Organic Carbon Inputs Drive Convergent Selection for Specific Autotrophic Afipia and Thiobacillus Strains Within Complex Microbiomes.
PMID:33897653
Assessment of Biological Contribution to Natural Recovery of Anthropized Freshwater Sediments From Argentina: Autochthonous Microbiome Structure and Functional Prediction.
PMID:33897628
Pathway analysis for genome-wide genetic variation data: Analytic principles, latest developments, and new opportunities.
PMID:33896739
Transgenic mice overexpressing the LH receptor in the female reproductive system spontaneously develop endometrial tumour masses.
PMID:33893331
G-Protein-coupled Estrogen Receptor 1 Agonist G-1 Perturbs Sunitinib Resistance-related Phosphoproteomic Signatures in Renal Cell Carcinoma.
PMID:33893075
Reprogramming epiblast stem cells into pre-implantation blastocyst cell-like cells.
PMID:33891866
Exploring the dermotoxicity of the mycotoxin deoxynivalenol: combined morphologic and proteomic profiling of human epidermal cells reveals alteration of lipid biosynthesis machinery and membrane structural integrity relevant for skin barrier function.
PMID:33890134
Reverse vaccinology and subtractive genomics approaches for identifying common therapeutics against Mycobacterium leprae and Mycobacterium lepromatosis.
PMID:33889182
System-Level Analysis of Alzheimer's Disease Prioritizes Candidate Genes for Neurodegeneration.
PMID:33889174
Investigating the effects of chronic perinatal alcohol and combined nicotine and alcohol exposure on dopaminergic and non-dopaminergic neurons in the VTA.
PMID:33888815
The plasminogen protein is associated with high myopia as revealed by the iTRAQ-based proteomic analysis of the aqueous humor.
PMID:33888814
The Chinese mitten crab genome provides insights into adaptive plasticity and developmental regulation.
PMID:33888695
Isolation and genomic characterization of five novel strains of Erysipelotrichaceae from commercial pigs.
PMID:33888068
Transcriptome analysis of early stages of sorghum grain mold disease reveals defense regulators and metabolic pathways associated with resistance.
PMID:33888060
scSensitiveGeneDefine: sensitive gene detection in single-cell RNA sequencing data by Shannon entropy.
PMID:33888056
Expression Profiles Reveal Involvement of VEGF, IGF1, BIRC5, and MMP1 in Vulvar Carcinogenesis.
PMID:33888009
Transcriptome profiling of immune response to Yersinia ruckeri in spleen of rainbow trout (Oncorhynchus mykiss).
PMID:33882827
Transcriptomic alterations in malignant pleural mesothelioma cells in response to long‑term treatment with bullfrog sialic acid‑binding lectin.
PMID:33880588
KEGG2Net: Deducing gene interaction networks and acyclic graphs from KEGG pathways.
PMID:33880340
Identification of key genes and pathways in discoid lupus skin via bioinformatics analysis.
PMID:33879674
Use of RNA Sequencing to Perform Comprehensive Analysis of Long Noncoding RNA Expression Profiles in Macrophages Infected with Trichosporon asahii.
PMID:33877524
Altered metabolic pathways in a transgenic mouse model suggest mechanistic role of amyloid precursor protein overexpression in Alzheimer's disease.
PMID:33876332
Transcriptomic analysis to infer key molecular players involved during host response to NDV challenge in Gallus gallus (Leghorn & Fayoumi).
PMID:33875770
Identification and functional analyses of host factors interacting with the 17-kDa protein of Barley yellow dwarf virus-GAV.
PMID:33875710
Three PilZ Domain Proteins, PlpA, PixA, and PixB, Have Distinct Functions in Regulation of Motility and Development in Myxococcus xanthus.
PMID:33875546
Dynamic Pneumococcal Genetic Adaptations Support Bacterial Growth and Inflammation during Coinfection with Influenza.
PMID:33875471
Identification of the specific long-noncoding RNAs involved in night-break mediated flowering retardation in Chenopodium quinoa.
PMID:33874907
Reverse Plasticity Underlies Rapid Evolution by Clonal Selection within Populations of Fibroblasts Propagated on a Novel Soft Substrate.
PMID:33871606
Urinary Metabolomic and Proteomic Analyses in a Mouse Model of Prostatic Inflammation.
PMID:33870183
A structural analysis of the hypoxia response network.
PMID:33868803
Microglial Nox2 Plays a Key Role in the Pathogenesis of Experimental Autoimmune Encephalomyelitis.
PMID:33868265
Non-Genomic AhR-Signaling Modulates the Immune Response in Endotoxin-Activated Macrophages After Activation by the Environmental Stressor BaP.
PMID:33868237
Halobellus ruber sp. nov., a deep red-pigmented extremely halophilic archaeon isolated from a Korean solar saltern.
PMID:33864546
Silencing SHMT2 inhibits the progression of tongue squamous cell carcinoma through cell cycle regulation.
PMID:33863325
Bioinformatics and survival analysis of glia maturation factor-γ in pan-cancers.
PMID:33863293
Bioinformatic Analysis of Key Genes and Pathways Related to Keloids.
PMID:33860039
Utilizing network pharmacology and molecular docking to explore the underlying mechanism of Guizhi Fuling Wan in treating endometriosis.
PMID:33859874
Disruption of Circadian Transcriptome in Lung by Acute Sleep Deprivation.
PMID:33859677
Transcriptome analysis reveals the encystment-related lncRNA expression profile and coexpressed mRNAs in Pseudourostyla cristata.
PMID:33859278
Novel, non-invasive markers for detecting therapy induced neuroendocrine differentiation in castration-resistant prostate cancer patients.
PMID:33859239
Eudiplozoon nipponicum (Monogenea, Diplozoidae) and its adaptation to haematophagy as revealed by transcriptome and secretome profiling.
PMID:33858339
Comparative physiological and full-length transcriptome analyses reveal the molecular mechanism of melatonin-mediated salt tolerance in okra (Abelmoschus esculentus L.).
PMID:33858330
Interacting impact of maternal inflammatory response and stress on the amygdala transcriptome of pigs.
PMID:33856433
Drug-Target Interaction Prediction via Dual Laplacian Graph Regularized Logistic Matrix Factorization.
PMID:33855072
Unraveling Heterogeneity of Tumor Cells and Microenvironment and Its Clinical Implications for Triple Negative Breast Cancer.
PMID:33854958
Expression analysis of genes related to cold tolerance in Dendroctonus valens.
PMID:33854828
Genomic insights into population history and biological adaptation in Oceania.
PMID:33854233
Genomic characterization of a polyvalent hydrocarbonoclastic bacterium Pseudomonas sp. strain BUN14.
PMID:33854112
Transcriptome-wide study revealed m6A regulation of embryonic muscle development in Dingan goose (Anser cygnoides orientalis).
PMID:33853538
A long non-coding RNAs expression signature to improve prognostic prediction of Wilms tumor in children.
PMID:33850811
Metabolic pathways inferred from a bacterial marker gene illuminate ecological changes across South Pacific frontal boundaries.
PMID:33850115
Identification of genes and pathways involved in malignant pleural mesothelioma using bioinformatics methods.
PMID:33849532
Global RNA profiles show target selectivity and physiological effects of peptide-delivered antisense antibiotics.
PMID:33849070
Genome-wide characterization of human minisatellite VNTRs: population-specific alleles and gene expression differences.
PMID:33849068
Protein acylation by saturated very long chain fatty acids and endocytosis are involved in necroptosis.
PMID:33848465
Identification of differentially expressed miRNAs in human cells infected with different Zika virus strains.
PMID:33847814
Identification and analysis of key genes associated with acute myocardial infarction by integrated bioinformatics methods.
PMID:33847684
Whole-exome sequencing with targeted analysis and epilepsy after acute symptomatic neonatal seizures.
PMID:33846556
Discovering key transcriptomic regulators in pancreatic ductal adenocarcinoma using Dirichlet process Gaussian mixture model.
PMID:33846515
Transcriptomic analysis of human brain microvascular endothelial cells exposed to laminin binding protein (adhesion lipoprotein) and Streptococcus pneumoniae.
PMID:33846455
Interferon-γ Response of Mycobacterium avium subsp. paratuberculosis Infected Goats to Recombinant and Synthetic Mycobacterial Antigens.
PMID:33842578
Overexpression of GINS4 Is Associated With Tumor Progression and Poor Survival in Hepatocellular Carcinoma.
PMID:33842367
Potential targets identified in adenoid cystic carcinoma point out new directions for further research.
PMID:33841642
Integrated Multi-Omic Analyses of the Genomic Modifications by Gut Microbiome-Derived Metabolites of Epicatechin, 5-(4'-Hydroxyphenyl)-γ-Valerolactone, in TNFalpha-Stimulated Primary Human Brain Microvascular Endothelial Cells.
PMID:33841078
MiR-33a plays an crucial role in the proliferation of bovine preadipocytes.
PMID:33840361
Elucidating molecular mechanisms of acquired resistance to BRAF inhibitors in melanoma using a microfluidic device and deep sequencing.
PMID:33840166
Oncogenic KRAS Recruits an Expansive Transcriptional Network through Mutant p53 to Drive Pancreatic Cancer Metastasis.
PMID:33839689
Aging features of the migratory locust at physiological and transcriptional levels.
PMID:33838645
Bayesian estimation of cell type-specific gene expression with prior derived from single-cell data.
PMID:33837133
Identification of co-expression network correlated with different periods of adipogenic and osteogenic differentiation of BMSCs by weighted gene co-expression network analysis (WGCNA).
PMID:33836657
Tumor Microenvironment Proteomics: Lessons From Multiple Myeloma.
PMID:33833982
Molecular mechanisms detected in yak lung tissue via transcriptome-wide analysis provide insights into adaptation to high altitudes.
PMID:33833362
Prediction of Streptococcus uberis clinical mastitis treatment success in dairy herds by means of mass spectrometry and machine-learning.
PMID:33833319
lncRNA C2dat2 facilitates autophagy and apoptosis via the miR-30d-5p/DDIT4/mTOR axis in cerebral ischemia-reperfusion injury.
PMID:33833132
A comparison of shared patterns of differential gene expression and gene ontologies in response to water-stress in roots and leaves of four diverse genotypes of Lolium and Festuca spp. temperate pasture grasses.
PMID:33831050
Prognostic Implication of the Expression Level of PECAM-1 in Non-small Cell Lung Cancer.
PMID:33828969
Comparative Metagenomics Reveals Microbial Signatures of Sugarcane Phyllosphere in Organic Management.
PMID:33828538
Gaussian graphical modeling of the serum exposome and metabolome reveals interactions between environmental chemicals and endogenous metabolites.
PMID:33828161
An order independent algorithm for inferring gene regulatory network using quantile value for conditional independence tests.
PMID:33828122
Genome-Based Targeted Sequencing as a Reproducible Microbial Community Profiling Assay.
PMID:33827913
The draft genome of the specialist flea beetle Altica viridicyanea (Coleoptera: Chrysomelidae).
PMID:33827435
Prediction of biological age and evaluation of genome-wide dynamic methylomic changes throughout human aging.
PMID:33826720
Plasma microrna expression profile for reduced ejection fraction in dilated cardiomyopathy.
PMID:33824379
Children with Autism and Their Typically Developing Siblings Differ in Amplicon Sequence Variants and Predicted Functions of Stool-Associated Microbes.
PMID:33824194
Establishing a consensus for the hallmarks of cancer based on gene ontology and pathway annotations.
PMID:33823788
miRSM: an R package to infer and analyse miRNA sponge modules in heterogeneous data.
PMID:33822666
Gene expression evaluation of antioxidant enzymes in patients with hepatocellular carcinoma: RT-qPCR and bioinformatic analyses.
PMID:33821873
Integrative microbiomics in bronchiectasis exacerbations.
PMID:33820995
The Selenophosphate Synthetase Gene, selD, Is Important for Clostridioides difficile Physiology.
PMID:33820795
The construction and analysis of a ferroptosis-related gene prognostic signature for pancreatic cancer.
PMID:33819918
A bioinformatic analysis of the inhibin-betaglycan-endoglin/CD105 network reveals prognostic value in multiple solid tumors.
PMID:33819300
Glutathionylation chemistry promotes interleukin-1 beta-mediated glycolytic reprogramming and pro-inflammatory signaling in lung epithelial cells.
PMID:33817836
Screening of Hub Genes Associated with Pulmonary Arterial Hypertension by Integrated Bioinformatic Analysis.
PMID:33816621
COVID-19 co-infection mathematical model as guided through signaling structural framework.
PMID:33815692
Effects of Simulated Microgravity on the Proteome and Secretome of the Polyextremotolerant Black Fungus Knufia chersonesos.
PMID:33815472
A Comparison of Differential Gene Expression in Response to the Onset of Water Stress Between Three Hybrid Brachiaria Genotypes.
PMID:33815444
Comparative Analysis of Adelphocoris suturalis Jakovlev (Hemiptera: Miridae) Immune Responses to Fungal and Bacterial Pathogens.
PMID:33815150
Profiling of microRNAs in actinic keratosis and cutaneous squamous cell carcinoma patients.
PMID:33813600
Identification of the molecular regulation of differences in lipid deposition in dedifferentiated preadipocytes from different chicken tissues.
PMID:33812382
Traditional Chinese Medicine (TCM) in the treatment of COVID-19 and other viral infections: Efficacies and mechanisms.
PMID:33811957
A bioactive molecule made by unusual salvage of radical SAM enzyme byproduct 5-deoxyadenosine blurs the boundary of primary and secondary metabolism.
PMID:33811856
Metabolic Capacity of the Antarctic Cyanobacterium Phormidium pseudopriestleyi That Sustains Oxygenic Photosynthesis in the Presence of Hydrogen Sulfide.
PMID:33809699
Strategies to Modulate Specialized Metabolism in Mediterranean Crops: From Molecular Aspects to Field.
PMID:33809189
Metabolome and Transcriptome Analyses Reveal the Regulatory Mechanisms of Photosynthesis in Developing Ginkgo biloba Leaves.
PMID:33807564
Sirtuins-Mediated System-Level Regulation of Mammalian Tissues at the Interface between Metabolism and Cell Cycle: A Systematic Review.
PMID:33806509
Highly Species-Specific Foliar Metabolomes of Diverse Woody Species and Relationships with the Leaf Economics Spectrum.
PMID:33805842
Corynebacterium diphtheriae Proteome Adaptation to Cell Culture Medium and Serum.
PMID:33805816
Withholding of M-CSF Supplement Reprograms Macrophages to M2-Like via Endogenous CSF-1 Activation.
PMID:33805444
The Potential Equivalents of TET2 Mutations.
PMID:33805247
Molecular Pathways and Pigments Underlying the Colors of the Pearl Oyster Pinctada margaritifera var. cumingii (Linnaeus 1758).
PMID:33804186
Candidate Markers of Olaparib Response from Genomic Data Analyses of Human Cancer Cell Lines.
PMID:33803939
Innate Resistance and Phosphite Treatment Affect Both the Pathogen's and Host's Transcriptomes in the Tanoak-Phytophthora ramorum Pathosystem.
PMID:33803362
Indole-3-Acetic Acid Is Synthesized by the Endophyte Cyanodermella asteris via a Tryptophan-Dependent and -Independent Way and Mediates the Interaction with a Non-Host Plant.
PMID:33800748
A Systematic Review of Genomic Regions and Candidate Genes Underlying Behavioral Traits in Farmed Mammals and Their Link with Human Disorders.
PMID:33800722
Retinal Genomic Fabric Remodeling after Optic Nerve Injury.
PMID:33799827
Complete genome sequence of the Pseudomonas oleovorans strain ODT-83 isolated from oyster.
PMID:33797591
Biosyntheses characterization of alkaloids and flavonoids in Sophora flavescens by combining metabolome and transcriptome.
PMID:33795823
Network pharmacology and molecular docking study on the active ingredients of qidengmingmu capsule for the treatment of diabetic retinopathy.
PMID:33795817
Transcriptional circuitry atlas of genetic diverse unstimulated murine and human macrophages define disparity in population-wide innate immunity.
PMID:33795737
Analysis of a photosynthetic cyanobacterium rich in internal membrane systems via gradient profiling by sequencing (Grad-seq).
PMID:33793824
Mass Spectrometry-Based Shotgun Lipidomics for Cancer Research.
PMID:33791973
Weighted Gene Coexpression Network Analysis Uncovers Critical Genes and Pathways for Multiple Brain Regions in Parkinson's Disease.
PMID:33791366
Computational Tumor Infiltration Phenotypes Enable the Spatial and Genomic Analysis of Immune Infiltration in Colorectal Cancer.
PMID:33791196
Construction of a Prognostic Gene Signature Associated with Immune Infiltration in Glioma: A Comprehensive Analysis Based on the CGGA.
PMID:33790966
Longitudinal study of the scalp microbiome suggests coconut oil to enrich healthy scalp commensals.
PMID:33790324
Somatic mutations in lymphocytes in patients with immune-mediated aplastic anemia.
PMID:33785863
Proteomics study on the effect of silybin on cardiomyopathy in obese mice.
PMID:33785854
Delineating proinflammatory microenvironmental signals by ex vivo modeling of the immature intestinal stroma.
PMID:33785826
Representative Diatom and Coccolithophore Species Exhibit Divergent Responses throughout Simulated Upwelling Cycles.
PMID:33785571
Global Transcriptional Regulators Fine-Tune the Translational and Metabolic Efficiency for Optimal Growth of Escherichia coli.
PMID:33785570
Deciphering the transcriptomic regulation of heat stress responses in Nothofagus pumilio.
PMID:33784314
Metabolomic Biomarkers of Healthy Dietary Patterns and Cardiovascular Outcomes.
PMID:33782776
Screening of osteoarthritis diagnostic markers based on immune-related genes and immune infiltration.
PMID:33782454
Insights into Acinetobacter baumannii fatty acid synthesis 3-oxoacyl-ACP reductases.
PMID:33782435
Integrating Systems and Synthetic Biology to Understand and Engineer Microbiomes.
PMID:33781078
Generic injuries are sufficient to induce ectopic Wnt organizers in Hydra.
PMID:33779545
Expansion and persistence of antibiotic-specific resistance genes following antibiotic treatment.
PMID:33779498
The Gut Microbiome Is Altered in Postmenopausal Women With Osteoporosis and Osteopenia.
PMID:33778322
SOCS2 is a potential prognostic marker that suppresses the viability of hepatocellular carcinoma cells.
PMID:33777222
Gene Expression Analysis Suggests Immunological Changes of Peripheral Blood Monocytes in the Progression of Patients With Coronary Artery Disease.
PMID:33777109
Analysis of human total antibody repertoires in TIF1γ autoantibody positive dermatomyositis.
PMID:33772100
The Burkholderia pseudomallei intracellular 'TRANSITome'.
PMID:33772012
RNA sequencing and bioinformatics analysis of human lens epithelial cells in age-related cataract.
PMID:33771123
Prioritization of candidate genes for a South African family with Parkinson's disease using in-silico tools.
PMID:33770142
Pathway-level analysis of genome-wide circadian dynamics in diverse tissues in rat and mouse.
PMID:33768484
Endothelial Jak3 expression enhances pro-hematopoietic angiocrine function in mice.
PMID:33767339
Preliminary functional analysis of the subgingival microbiota of cats with periodontitis and feline chronic gingivostomatitis.
PMID:33767308
Hepatic steatosis and steatohepatitis: a functional meta-analysis of sex-based differences in transcriptomic studies.
PMID:33766130
Comparative proteomics reveals mechanisms that underlie insecticide resistance in Culex pipiens pallens Coquillett.
PMID:33764997
Identification of a Metabolism-Related Signature for the Prediction of Survival in Endometrial Cancer Patients.
PMID:33763366
Fasciola hepatica hijacks host macrophage miRNA machinery to modulate early innate immune responses.
PMID:33762636
Genome-wide impact of hydrogen peroxide on maintenance DNA methylation in replicating cells.
PMID:33761969
A 2 miRNAs-based signature for the diagnosis of atherosclerosis.
PMID:33761890
Deep learning assisted multi-omics integration for survival and drug-response prediction in breast cancer.
PMID:33761889
Mitochondrial genotype alters the impact of rapamycin on the transcriptional response to nutrients in Drosophila.
PMID:33761878
Transcriptome analyses of 7-day-old zebrafish larvae possessing a familial Alzheimer's disease-like mutation in psen1 indicate effects on oxidative phosphorylation, ECM and MCM functions, and iron homeostasis.
PMID:33761877
Weighted gene co-expression network analysis identifies specific modules and hub genes related to coronary artery disease.
PMID:33758323
Herb-target virtual screening and network pharmacology for prediction of molecular mechanism of Danggui Beimu Kushen Wan for prostate cancer.
PMID:33758314
Transcriptomic insight into the translational value of two murine models in human atopic dermatitis.
PMID:33758305
Genome insight and description of antibiotic producing Massilia antibiotica sp. nov., isolated from oil-contaminated soil.
PMID:33758279
Functional annotations of three domestic animal genomes provide vital resources for comparative and agricultural research.
PMID:33758196
Overexpression of CCNE1 confers a poorer prognosis in triple-negative breast cancer identified by bioinformatic analysis.
PMID:33757543
Scarcity of scale-free topology is universal across biochemical networks.
PMID:33753807
Genome-wide identification of MIKC-type genes related to stamen and gynoecium development in Liriodendron.
PMID:33753780
A multiomics approach to identify host-microbe alterations associated with infection severity in diabetic foot infections: a pilot study.
PMID:33753735
The number of catalytic cycles in an enzyme's lifetime and why it matters to metabolic engineering.
PMID:33753504
The evolution of ancestral and species-specific adaptations in snowfinches at the Qinghai-Tibet Plateau.
PMID:33753478
DNA affinity purification sequencing and transcriptional profiling reveal new aspects of nitrogen regulation in a filamentous fungus.
PMID:33753477
Human Corneal Epithelial Cells Internalize Aspergillus flavus Spores by Actin-Mediated Endocytosis.
PMID:33753415
Critical role of the BAF chromatin remodeling complex during murine neural crest development.
PMID:33750945
The identification of circular RNAs from peripheral blood mononuclear cells in systemic lupus erythematosus.
PMID:33750387
Non-coding RNA Identification in Osteonecrosis of the Femoral Head Using Competitive Endogenous RNA Network Analysis.
PMID:33749138
DNA repair pathway activation features in follicular and papillary thyroid tumors, interrogated using 95 experimental RNA sequencing profiles.
PMID:33748479
Stochastic Simulation of Cellular Metabolism.
PMID:33747671
Widely targeted metabolic analysis revealed the changed pigmentation and bioactive compounds in the ripening Berchemia floribunda (Wall.) Brongn. fruit.
PMID:33747452
Transcriptomic Analysis of Inflammatory Cardiomyopathy Identifies Molecular Signatures of Disease and Informs in silico Prediction of a Network-Based Rationale for Therapy.
PMID:33746983
A network pharmacology based approach for predicting active ingredients and potential mechanism of Lianhuaqingwen capsule in treating COVID-19.
PMID:33746604
Identification of key genes and pathways in scleral extracellular matrix remodeling in glaucoma: Potential therapeutic agents discovered using bioinformatics analysis.
PMID:33746571
Comparative transcriptomic analysis of the different developmental stages of ovary in red swamp crayfish Procambarus clarkii.
PMID:33745451
RNA-seq analysis and gene expression dynamics in the salivary glands of the argasid tick Ornithodoros erraticus along the trophogonic cycle.
PMID:33743776
Identification of molecular biomarkers and pathways of NSCLC: insights from a systems biomedicine perspective.
PMID:33742334
Identification of oxytocin-related lncRNAs and assessment of their expression in breast cancer.
PMID:33742056
A computational workflow for the expansion of heterologous biosynthetic pathways to natural product derivatives.
PMID:33741955
Pre-Cambrian roots of novel Antarctic cryptoendolithic bacterial lineages.
PMID:33741058
Identification of regulatory factors promoting embryogenic callus formation in barley through transcriptome analysis.
PMID:33740900
Differential microRNAs expression profiles in liver from three different lifestyle modification mice models.
PMID:33740891
NEK1 deficiency affects mitochondrial functions and the transcriptome of key DNA repair pathways.
PMID:33740813
High expression of COL5A2, a member of COL5 family, indicates the poor survival and facilitates cell migration in gastric cancer.
PMID:33739392
Applications of Machine Learning in Human Microbiome Studies: A Review on Feature Selection, Biomarker Identification, Disease Prediction and Treatment.
PMID:33737920
Specialization of the Reiterated Copies of the Heterodimeric Integration Host Factor Genes in Geobacter sulfurreducens.
PMID:33737919
A ceRNA-associated risk model predicts the poor prognosis for head and neck squamous cell carcinoma patients.
PMID:33737696
Comparative transcriptome analysis during developmental stages of direct somatic embryogenesis in Tilia amurensis Rupr.
PMID:33737673
Global network analysis in Schizosaccharomyces pombe reveals three distinct consequences of the common 1-kb deletion causing juvenile CLN3 disease.
PMID:33737578
Genes for degradation and utilization of uronic acid-containing polysaccharides of a marine bacterium Catenovulum sp. CCB-QB4.
PMID:33732545
Latent Anti-nutrients and Unintentional Breeding Consequences in Australian Sorghum bicolor Varieties.
PMID:33732274
Application of text mining to develop AOP-based mucus hypersecretion genesets and confirmation with in vitro and clinical samples.
PMID:33731770
Potential benefits of L. acidophilus in dyslipidemic rats.
PMID:33731756
Differential gene expression profile between progressive and de novo muscle invasive bladder cancer and its prognostic implication.
PMID:33731721
Ultrafast functional profiling of RNA-seq data for nonmodel organisms.
PMID:33731361
Effects of sevoflurane anesthesia and abdominal surgery on the systemic metabolome: a prospective observational study.
PMID:33731015
Chronic villitis of unknown etiology: Investigations into viral pathogenesis.
PMID:33730616
In-silico structural analysis of Pseudomonas syringae effector HopZ3 reveals ligand binding activity and virulence function.
PMID:33730245
Detection of horizontal gene transfer in the genome of the choanoflagellate Salpingoeca rosetta.
PMID:33727612
Integration of summary data from GWAS and eQTL studies identified novel risk genes for coronary artery disease.
PMID:33725943
Carotenoids produced by the deep-sea bacterium Erythrobacter citreus LAMA 915: detection and proposal of their biosynthetic pathway.
PMID:33723710
Specific microbiome profile in Takayasu's arteritis and giant cell arteritis.
PMID:33723291
COVID-19 patient transcriptomic and genomic profiling reveals comorbidity interactions with psychiatric disorders.
PMID:33723208
Gut microbiota-mediated lysophosphatidylcholine generation promotes colitis in intestinal epithelium-specific Fut2 deficiency.
PMID:33722220
Genome-scale model reconstruction of the methylotrophic yeast Ogataea polymorpha.
PMID:33722219
The characteristics of circRNA as competing endogenous RNA in pathogenesis of acute myeloid leukemia.
PMID:33722210
A systematic analysis of hypermucoviscosity and capsule reveals distinct and overlapping genes that impact Klebsiella pneumoniae fitness.
PMID:33720976
Modeling dynamic correlation in zero-inflated bivariate count data with applications to single-cell RNA sequencing data.
PMID:33720414
Transcriptome Analysis Reveals Photoperiod-Associated Genes Expressed in Rice Anthers.
PMID:33719293
iTRAQ-based comparative proteome analyses of different growth stages revealing the regulatory role of reactive oxygen species in the fruiting body development of Ophiocordyceps sinensis.
PMID:33717691
Microbial Functional Responses in Marine Biofilms Exposed to Deepwater Horizon Spill Contaminants.
PMID:33717029
The Counteracting Effects of Demography on Functional Genomic Variation: The Roma Paradigm.
PMID:33713133
Evolutionary Contribution of Duplicated Genes to Genome Evolution in the Ginseng Species Complex.
PMID:33713106
Nutrient-driven genome evolution revealed by comparative genomics of chrysomonad flagellates.
PMID:33712682
Human milk extracellular vesicle miRNA expression and associations with maternal characteristics in a population-based cohort from the Faroe Islands.
PMID:33712635
Coronary artery disease: differential expression of ceRNAs and interaction analyses.
PMID:33708856
Dysbiosis of Oral Microbiota During Oral Squamous Cell Carcinoma Development.
PMID:33708627
Novel and Transgressive Salinity Tolerance in Recombinant Inbred Lines of Rice Created by Physiological Coupling-Uncoupling and Network Rewiring Effects.
PMID:33708229
Transcriptome Analysis of the Inhibitory Effect of Sennoside A on the Metastasis of Hepatocellular Carcinoma Cells.
PMID:33708105
Transcriptomic responses to aluminum stress in tea plant leaves.
PMID:33707704
Burkholderia cenocepacia transcriptome during the early contacts with giant plasma membrane vesicles derived from live bronchial epithelial cells.
PMID:33707642
The gut microbiota composition of Trichoplusia ni is altered by diet and may influence its polyphagous behavior.
PMID:33707556
Pan-cancer analysis of RNA expression of ANGIOTENSIN-I-CONVERTING ENZYME 2 reveals high variability and possible impact on COVID-19 clinical outcomes.
PMID:33707526
Exovesicular-Shh confers Imatinib resistance by upregulating Bcl2 expression in chronic myeloid leukemia with variant chromosomes.
PMID:33707419
Consumption of High-Fructose Corn Syrup Compared with Sucrose Promotes Adiposity and Increased Triglyceridemia but Comparable NAFLD Severity in Juvenile Iberian Pigs.
PMID:33693900
Phytochrome regulates cellular response plasticity and the basic molecular machinery of leaf development.
PMID:33693822
Reconstruction of the Origin of a Neo-Y Sex Chromosome and Its Evolution in the Spotted Knifejaw, Oplegnathus punctatus.
PMID:33693787
Copper Availability Influences the Transcriptomic Response of Candida albicans to Fluconazole Stress.
PMID:33693623
Calcium-binding and coiled-coil domain 2 promotes the proliferation and suppresses apoptosis of prostate cancer cells.
PMID:33692836
Changes in protein expression due to metformin treatment and hyperinsulinemia in a human endometrial cancer cell line.
PMID:33690729
A functional chromogen gene C from wild rice is involved in a different anthocyanin biosynthesis pathway in indica and japonica.
PMID:33688983
The mRNA-LNP platform's lipid nanoparticle component used in preclinical vaccine studies is highly inflammatory.
PMID:33688649
Long non-coding RNAs ENST00000429730.1 and MSTRG.93125.4 are associated with metabolic activity in tuberculosis lesions of sputum-negative tuberculosis patients.
PMID:33686954
An Update on MRMAssayDB: A Comprehensive Resource for Targeted Proteomics Assays in the Community.
PMID:33683131
Analysis of MicroRNAs Associated With Carotid Atherosclerotic Plaque Rupture With Thrombosis.
PMID:33679879
The Comparative Methylome and Transcriptome After Change of Direction Compared to Straight Line Running Exercise in Human Skeletal Muscle.
PMID:33679435
Physiological and transcriptional response to drought stress among bioenergy grass Miscanthus species.
PMID:33676571
Major ceRNA regulation and key metabolic signature analysis of intervertebral disc degeneration.
PMID:33676464
Key metabolism pathways and regulatory mechanisms of high polysaccharide yielding in Hericium erinaceus.
PMID:33676419
Investigating mechanisms underlying genetic resistance to Salmon Rickettsial Syndrome in Atlantic salmon using RNA sequencing.
PMID:33676414
Association of maternal gut microbiota and plasma metabolism with congenital heart disease in offspring: a multi-omic analysis.
PMID:33674681
Single-cell differential splicing analysis reveals high heterogeneity of liver tumor-infiltrating T cells.
PMID:33674641
Tumor methionine metabolism drives T-cell exhaustion in hepatocellular carcinoma.
PMID:33674593
Germline and Somatic Whole-Exome Sequencing Identifies New Candidate Genes Involved in Familial Predisposition to Serrated Polyposis Syndrome.
PMID:33672345
The Autotrophic Core: An Ancient Network of 404 Reactions Converts H2, CO2, and NH3 into Amino Acids, Bases, and Cofactors.
PMID:33672143
Accumulation of the Auxin Precursor Indole-3-Acetamide Curtails Growth through the Repression of Ribosome-Biogenesis and Development-Related Transcriptional Networks.
PMID:33670805
Comparison of SYK Signaling Networks Reveals the Potential Molecular Determinants of Its Tumor-Promoting and Suppressing Functions.
PMID:33670716
A Pilot Study for Metabolic Profiling of Obesity-Associated Microbial Gut Dysbiosis in Male Wistar Rats.
PMID:33670496
Ranking Metabolite Sets by Their Activity Levels.
PMID:33670102
Gut Microbiome-Based Analysis of Lipid A Biosynthesis in Individuals with Autism Spectrum Disorder: An In Silico Evaluation.
PMID:33669978
Transporters at the Interface between Cytosolic and Mitochondrial Amino Acid Metabolism.
PMID:33669382
Knowledge-Guided "Community Network" Analysis Reveals the Functional Modules and Candidate Targets in Non-Small-Cell Lung Cancer.
PMID:33669233
Comparative Transcriptome Profiling of Human and Pig Intestinal Epithelial Cells after Porcine Deltacoronavirus Infection.
PMID:33668405
Identify potential miRNA-mRNA regulatory networks contributing to high-risk neuroblastoma.
PMID:33666785
Acute Kidney Injury Results in Long-Term Diastolic Dysfunction That Is Prevented by Histone Deacetylase Inhibition.
PMID:33665513
Deletion of hippocampal Glucocorticoid receptors unveils sex-biased microRNA expression and neuronal morphology alterations in mice.
PMID:33665240
Starvation Alters Gut Microbiome in Black Soldier Fly (Diptera: Stratiomyidae) Larvae.
PMID:33664713
Wnt-β-catenin activation epigenetically reprograms Treg cells in inflammatory bowel disease and dysplastic progression.
PMID:33664518
Pharmacological inhibition of tumor anabolism and host catabolism as a cancer therapy.
PMID:33664364
Alterations in skin microbiome mediated by radiotherapy and their potential roles in the prognosis of radiotherapy-induced dermatitis: a pilot study.
PMID:33664352
Bayesian network-driven clustering analysis with feature selection for high-dimensional multi-modal molecular data.
PMID:33664338
Comparative analysis of drought-responsive and -adaptive genes in Chinese wingnut (Pterocarya stenoptera C. DC).
PMID:33663380
The Changes of Leukocytes in Brain and Blood After Intracerebral Hemorrhage.
PMID:33659003
Resequencing and SNP discovery of Amur ide (Leuciscus waleckii) provides insights into local adaptations to extreme environments.
PMID:33658614
B2M overexpression correlates with malignancy and immune signatures in human gliomas.
PMID:33658560
Identification of candidate genes and pathways in retinopathy of prematurity by whole exome sequencing of preterm infants enriched in phenotypic extremes.
PMID:33654115
Human Chorionic Gonadotropin Modulates the Transcriptome of the Myometrium and Cervix in Late Gestation.
PMID:33650091
Complete genome sequencing of Bacillus sp. TK-2, analysis of its cold evolution adaptability.
PMID:33649356
Novel gene signatures for stage classification of the squamous cell carcinoma of the lung.
PMID:33649335
Differential regulation of β-catenin-mediated transcription via N- and C-terminal co-factors governs identity of murine intestinal epithelial stem cells.
PMID:33649334
Genome-wide shifts in climate-related variation underpin responses to selective breeding in a widespread conifer.
PMID:33649218
Effects of non-vascularized adipose tissue transplantation on its genetic profile.
PMID:33648423
Interspecies chimeric conditions affect the developmental rate of human pluripotent stem cells.
PMID:33647016
Gene Size Matters: An Analysis of Gene Length in the Human Genome.
PMID:33643374
Potential Molecular Mechanism of TNF Superfamily-Related Genes in Glioblastoma Multiforme Based on Transcriptome and Epigenome.
PMID:33643183
Robust Physiological Metrics From Sparsely Sampled Networks.
PMID:33643068
Combination of Ginsenosides Rb2 and Rg3 Promotes Angiogenic Phenotype of Human Endothelial Cells via PI3K/Akt and MAPK/ERK Pathways.
PMID:33643049
The Corylus mandshurica genome provides insights into the evolution of Betulaceae genomes and hazelnut breeding.
PMID:33642584
PIWI-interacting RNA sequencing profiles in maternal plasma-derived exosomes reveal novel non-invasive prenatal biomarkers for the early diagnosis of nonsyndromic cleft lip and palate.
PMID:33639402
Response of the ileum transcriptome to probiotic and fructo-oligosaccharides in Taiping chicken.
PMID:33638812
The role of gut microbiota and amino metabolism in the effects of improvement of islet β-cell function after modified jejunoileal bypass.
PMID:33637880
Retroviral integrations contribute to elevated host cancer rates during germline invasion.
PMID:33637755
Dynamic Allocation of Carbon Storage and Nutrient-Dependent Exudation in a Revised Genome-Scale Model of Prochlorococcus.
PMID:33633777
TOXPANEL: A Gene-Set Analysis Tool to Assess Liver and Kidney Injuries.
PMID:33633572
Enhanced Understanding of Molecular Interactions and Function Underlying Pain Processes Through Networks of Transcript Isoforms, Genes, and Gene Families.
PMID:33633454
The evolution of oxygen-utilizing enzymes suggests early biosphere oxygenation.
PMID:33633374
Genetic architectures of proximal and distal colorectal cancer are partly distinct.
PMID:33632709
Genomic insight into diet adaptation in the biological control agent Cryptolaemus montrouzieri.
PMID:33632122
Identification of UBE2C as hub gene in driving prostate cancer by integrated bioinformatics analysis.
PMID:33630978
Uncovering the Anti-Lung-Cancer Mechanisms of the Herbal Drug FDY2004 by Network Pharmacology.
PMID:33628308
A Network Pharmacology Study on the Molecular Mechanisms of FDY003 for Breast Cancer Treatment.
PMID:33628298
An Expanded Gene Catalog of Mouse Gut Metagenomes.
PMID:33627510
Distinct, dosage-sensitive requirements for the autism-associated factor CHD8 during cortical development.
PMID:33627187
Comprehensive Analysis of Gene Expression Changes and Validation in Hepatocellular Carcinoma.
PMID:33623390
Automating parameter selection to avoid implausible biological pathway models.
PMID:33623016
Lysosome repositioning as an autophagy escape mechanism by Mycobacterium tuberculosis Beijing strain.
PMID:33619301
mRNA Transcriptome Analysis of Bone in a Mouse Model of Implant-Associated Staphylococcus aureus Osteomyelitis.
PMID:33619031
Mitonuclear Coevolution, but not Nuclear Compensation, Drives Evolution of OXPHOS Complexes in Bivalves.
PMID:33616640
Identifying Thyroid Carcinoma-Related Genes by Integrating GWAS and eQTL Data.
PMID:33614667
Osmotic stress in banana is relieved by exogenous nitric oxide.
PMID:33614294
Transcriptomic analysis of nonylphenol effect on Saccharomyces cerevisiae.
PMID:33614281
Genetic Diversity and Signatures of Selection for Thermal Stress in Cattle and Other Two Bos Species Adapted to Divergent Climatic Conditions.
PMID:33613634
Identification of biomarkers and pathways for the SARS-CoV-2 infections that make complexities in pulmonary arterial hypertension patients.
PMID:33611340
Modulating the unfolded protein response with ONC201 to impact on radiation response in prostate cancer cells.
PMID:33608585
Laboratory Evolution and Reverse Engineering of Clostridium thermocellum for Growth on Glucose and Fructose.
PMID:33608285
Naked mole rat TRF1 safeguards glycolytic capacity and telomere replication under low oxygen.
PMID:33608273
Novel signaling pathways regulate SARS-CoV and SARS-CoV-2 infectious disease.
PMID:33607766
Transcriptomic Signatures and Functional Network Analysis of Chronic Rhinosinusitis With Nasal Polyps.
PMID:33603773
Cerebrospinal fluid proteome shows disrupted neuronal development in multiple sclerosis.
PMID:33602999
Enrichment analyses of diseases and pathways associated with precocious puberty using PrecocityDB.
PMID:33602974
Identification of biomarkers and pathogenesis in severe asthma by coexpression network analysis.
PMID:33602227
Global transcriptome profile of the developmental principles of in vitro iPSC-to-motor neuron differentiation.
PMID:33602141
Quantitative proteomic analysis of pear (Pyrus pyrifolia cv. "Hosui") flesh provides novel insights about development and quality characteristics of fruit.
PMID:33599839
Gut Microbial and Metabolic Profiling Reveal the Lingering Effects of Infantile Iron Deficiency Unless Treated with Iron.
PMID:33599094
Celastrol inhibits intestinal lipid absorption by reprofiling the gut microbiota to attenuate high-fat diet-induced obesity.
PMID:33598642
Investigation of allele specific expression in various tissues of broiler chickens using the detection tool VADT.
PMID:33597613
Mitochondrial Inhibitor Atovaquone Increases Tumor Oxygenation and Inhibits Hypoxic Gene Expression in Patients with Non-Small Cell Lung Cancer.
PMID:33597271
PathoFact: a pipeline for the prediction of virulence factors and antimicrobial resistance genes in metagenomic data.
PMID:33597026
Ferroptosis-related gene signature as a prognostic marker for lower-grade gliomas.
PMID:33594759
Hepatic connective tissue growth factor expression and regulation differ between non-steatotic and non-alcoholic steatotic livers from brain-dead donor.
PMID:33594198
Digital gene expression analysis of the response to Ralstonia solanacearum between resistant and susceptible tobacco varieties.
PMID:33594109
Genetic characteristics of Bursaphelenchus xylophilus third-stage dispersal juveniles.
PMID:33594100
Genome-scale meta-analysis of breast cancer datasets identifies promising targets for drug development.
PMID:33593445
Creation of a gene expression portrait of depression and its application for identifying potential treatments.
PMID:33589676
Profiling plasma-extracellular vesicle proteins and microRNAs in diabetes onset in middle-aged male participants in the ELSA-Brasil study.
PMID:33587339
GWAS of three molecular traits highlights core genes and pathways alongside a highly polygenic background.
PMID:33587031
SARS-CoV-2 Proteins Exploit Host's Genetic and Epigenetic Mediators for the Annexation of Key Host Signaling Pathways.
PMID:33585554
Hierarchical Microbial Functions Prediction by Graph Aggregated Embedding.
PMID:33584804
Gene Annotation in High Schools: Successful Student Pipeline and Teacher Professional Development in Bioscience Using GENI-ACT.
PMID:33584559
Catalpol Protects Against Pulmonary Fibrosis Through Inhibiting TGF-β1/Smad3 and Wnt/β-Catenin Signaling Pathways.
PMID:33584272
Identification of Potential Biomarkers Associated with Prognosis in Gastric Cancer via Bioinformatics Analysis.
PMID:33582701
In Esophageal Squamous Cells From Eosinophilic Esophagitis Patients, Th2 Cytokines Increase Eotaxin-3 Secretion Through Effects on Intracellular Calcium and a Non-Gastric Proton Pump.
PMID:33581123
Rainfall as a trigger of ecological cascade effects in an Australian groundwater ecosystem.
PMID:33580159
The potential pathways underlying the association of propyl-paraben exposure with aeroallergen sensitization and EASI score using metabolomics analysis.
PMID:33580129
Comparative transcriptome analysis of Rheum australe, an endangered medicinal herb, growing in its natural habitat and those grown in controlled growth chambers.
PMID:33580100
MSN, MWCNT and ZnO nanoparticle-induced CHO-K1 cell polarisation is linked to cytoskeleton ablation.
PMID:33579304
Clinically significant genomic alterations in the Chinese and Western patients with intrahepatic cholangiocarcinoma.
PMID:33579226
Apple Peel and Flesh Contain Pro-neurogenic Compounds.
PMID:33577796
Intermedilysin cytolytic activity depends on heparan sulfates and membrane composition.
PMID:33577603
Effects of glyphosate residues and different concentrate feed proportions in dairy cow rations on hepatic gene expression, liver histology and biochemical blood parameters.
PMID:33577576
MicroRNA‑592 promotes cell proliferation, migration and invasion in colorectal cancer by directly targeting SPARC.
PMID:33576452
CAMAMED: a pipeline for composition-aware mapping-based analysis of metagenomic data.
PMID:33575649
Integration of single-cell datasets reveals novel transcriptomic signatures of β-cells in human type 2 diabetes.
PMID:33575641
gNOMO: a multi-omics pipeline for integrated host and microbiome analysis of non-model organisms.
PMID:33575609
Omics Playground: a comprehensive self-service platform for visualization, analytics and exploration of Big Omics Data.
PMID:33575569
UniProt-Related Documents (UniReD): assisting wet lab biologists in their quest on finding novel counterparts in a protein network.
PMID:33575553
A Multi-Platform Metabolomics Approach Identifies Urinary Metabolite Signatures That Differentiate Ketotic From Healthy Dairy Cows.
PMID:33575283
Comparative analysis of the transcriptomes of two rice subspecies during domestication.
PMID:33574456
Small RNAs and their targets are associated with the transgenerational effects of water-deficit stress in durum wheat.
PMID:33574419
The effect of acute moderate-intensity exercise on the serum and fecal metabolomes and the gut microbiota of cross-country endurance athletes.
PMID:33574413
Transcriptome analysis of genes involved in starch biosynthesis in developing Chinese chestnut (Castanea mollissima Blume) seed kernels.
PMID:33574357
A mixture model to detect edges in sparse co-expression graphs with an application for comparing breast cancer subtypes.
PMID:33571253
Correlation between cortical gene expression and resting-state functional network centrality in healthy young adults.
PMID:33570215
Elucidating the involvement of apoptosis in postmortem proteolysis in porcine muscles from two production cycles using metabolomics approach.
PMID:33568769
Role of PDK1 in skeletal muscle hypertrophy induced by mechanical load.
PMID:33568757
Functionally selective activation of the dopamine receptor D2 is mirrored by the protein expression profiles.
PMID:33568753
Comparative transcriptomic analysis revealed novel potential therapeutic targets of traditional Chinese medicine (Pinggan-Qianyang decoction) on vascular remodeling in spontaneously hypertensive rats.
PMID:33568194
Comparative transcriptome analysis reveals novel insights into transcriptional responses to phosphorus starvation in oil palm (Elaeis guineensis) root.
PMID:33568046
Application of computational approaches to analyze metagenomic data.
PMID:33565054
System Pharmacology-Based Strategy to Decode the Synergistic Mechanism of GanDouLing for Wilson's Disease.
PMID:33564316
Classification of node-positive melanomas into prognostic subgroups using keratin, immune, and melanogenesis expression patterns.
PMID:33564068
RIP-seq reveals LINE-1 ORF1p association with p-body enriched mRNAs.
PMID:33563338
Guild-based analysis for understanding gut microbiome in human health and diseases.
PMID:33563315
Paroxetine-Overview of the Molecular Mechanisms of Action.
PMID:33562229
A functional genomics screen identifying blood cell development genes in Drosophila by undergraduates participating in a course-based research experience.
PMID:33561251
Differential immune signatures in the tumor microenvironment are associated with colon cancer racial disparities.
PMID:33560598
Contribution of horizontal gene transfer to the functionality of microbial biofilm on a macroalgae.
PMID:33558686
Antibiotic-resistant bacteria and gut microbiome communities associated with wild-caught shrimp from the United States versus imported farm-raised retail shrimp.
PMID:33558614
In silico identification of natural products from Traditional Chinese Medicine for cancer immunotherapy.
PMID:33558586
Integrated analysis identifies oxidative stress genes associated with progression and prognosis in gastric cancer.
PMID:33558567
Meta-analysis cum machine learning approaches address the structure and biogeochemical potential of marine copepod associated bacteriobiomes.
PMID:33558540
RNA Sequencing Reveals Distinct Immune Responses in the Chorioamniotic Membranes of Women with Preterm Labor and Microbial or Sterile Intra-amniotic Inflammation.
PMID:33558326
The screening and evaluation of potential clinically significant HIV drug combinations against the SARS-CoV-2 virus.
PMID:33553571
Prior Biological Knowledge Improves Genomic Prediction of Growth-Related Traits in Arabidopsis thaliana.
PMID:33552126
Impact of Processed Food (Canteen and Oil Wastes) on the Development of Black Soldier Fly (Hermetia illucens) Larvae and Their Gut Microbiome Functions.
PMID:33552039
Integrative Analyses of Genes Associated With Osteoporosis in CD16+ Monocyte.
PMID:33551990
Genetic and functional interaction network analysis reveals global enrichment of regulatory T cell genes influencing basal cell carcinoma susceptibility.
PMID:33549134
Identification of S1PR3 gene signature involved in survival of sepsis patients.
PMID:33549110
Inhibitory effect of sodium butyrate on colorectal cancer cells and construction of the related molecular network.
PMID:33549042
Transcriptome comparisons of in vitro intestinal epithelia grown under static and microfluidic gut-on-chip conditions with in vivo human epithelia.
PMID:33547413
Meta-omics characteristics of intestinal microbiota associated to HBeAg seroconversion induced by oral antiviral therapy.
PMID:33547384
N-linked glycosylation enzymes in the diatom Thalassiosira oceanica exhibit a diel cycle in transcript abundance and favor for NXT-type sites.
PMID:33547363
Involvement of the miR156/SPL module in flooding response in Medicago sativa.
PMID:33547346
Detecting survival-associated biomarkers from heterogeneous populations.
PMID:33547332
Integrative molecular characterization of sarcomatoid and rhabdoid renal cell carcinoma.
PMID:33547292
Sialotranscriptomics of the argasid tick Ornithodoros moubata along the trophogonic cycle.
PMID:33544727
Modeling drug response using network-based personalized treatment prediction (NetPTP) with applications to inflammatory bowel disease.
PMID:33544718
Multi-layered network-based pathway activity inference using directed random walks: application to predicting clinical outcomes in urologic cancer.
PMID:33543748
Identification of Genes Universally Differentially Expressed in Gastric Cancer.
PMID:33542925
Identifications of immune-responsive genes for adaptative traits by comparative transcriptome analysis of spleen tissue from Kazakh and Suffolk sheep.
PMID:33542475
Complement and coagulation cascades activation is the main pathophysiological pathway in early-onset severe preeclampsia revealed by maternal proteomics.
PMID:33542402
The Genetics of Sudden Infant Death Syndrome-Towards a Gene Reference Resource.
PMID:33540853
BSGatlas: a unified Bacillus subtilis genome and transcriptome annotation atlas with enhanced information access.
PMID:33539279
Genome annotation of disease-causing microorganisms.
PMID:33537706
Comprehensively Analyzed Macrophage-Regulated Genes Indicate That PSMA2 Promotes Colorectal Cancer Progression.
PMID:33537240
4-Hydroxyphenylpyruvate Dioxygenase-Like Protein Promotes Pancreatic Cancer Cell Progression and Is Associated With Glutamine-Mediated Redox Balance.
PMID:33537239
The acidified drinking water-induced changes in the behavior and gut microbiota of wild-type mice depend on the acidification mode.
PMID:33536529
Parvimonas micra, Peptostreptococcus stomatis, Fusobacterium nucleatum and Akkermansia muciniphila as a four-bacteria biomarker panel of colorectal cancer.
PMID:33536501
Immature symbiotic system between horizontally transmitted green algae and brown hydra.
PMID:33536483
GEOlimma: differential expression analysis and feature selection using pre-existing microarray data.
PMID:33535967
Histone modification dynamics at H3K27 are associated with altered transcription of in planta induced genes in Magnaporthe oryzae.
PMID:33534835
The Genomes of Two Billfishes Provide Insights into the Evolution of Endothermy in Teleosts.
PMID:33533895
Applications of stable isotopes in MALDI imaging: current approaches and an eye on the future.
PMID:33532914
Metabolic dysfunction in pregnancy: Fingerprinting the maternal metabolome using proton nuclear magnetic resonance spectroscopy.
PMID:33532625
Alterations in the gut bacterial microbiome in people with type 2 diabetes mellitus and diabetic retinopathy.
PMID:33531650
A High-Throughput Method for Identifying Novel Genes That Influence Metabolic Pathways Reveals New Iron and Heme Regulation in Pseudomonas aeruginosa.
PMID:33531406
Genomic and functional analyses of fungal and bacterial consortia that enable lignocellulose breakdown in goat gut microbiomes.
PMID:33526884
Functional Signatures in Non-Small-Cell Lung Cancer: A Systematic Review and Meta-Analysis of Sex-Based Differences in Transcriptomic Studies.
PMID:33526761
Known Drugs Identified by Structure-Based Virtual Screening Are Able to Bind Sigma-1 Receptor and Increase Growth of Huntington Disease Patient-Derived Cells.
PMID:33525510
Long-Term Waterlogging as Factor Contributing to Hypoxia Stress Tolerance Enhancement in Cucumber: Comparative Transcriptome Analysis of Waterlogging Sensitive and Tolerant Accessions.
PMID:33525400
Gene expression signatures of target tissues in type 1 diabetes, lupus erythematosus, multiple sclerosis, and rheumatoid arthritis.
PMID:33523973
Transcriptomic and Functional Analyses of Mitochondrial Dysfunction in Pressure Overload-Induced Right Ventricular Failure.
PMID:33522250
Pathway-Based Drug-Repurposing Schemes in Cancer: The Role of Translational Bioinformatics.
PMID:33520715
American lobster postlarvae alter gene regulation in response to ocean warming and acidification.
PMID:33520168
Integrative Analyses of mRNA Expression Profile Reveal SOCS2 and CISH Play Important Roles in GHR Mutation-Induced Excessive Abdominal Fat Deposition in the Sex-Linked Dwarf Chicken.
PMID:33519913
Identification of Key MicroRNAs and Mechanisms in Prostate Cancer Evolution Based on Biomarker Prioritization Model and Carcinogenic Survey.
PMID:33519899
A Qualitative Transcriptional Signature for the Risk Assessment of Precancerous Colorectal Lesions.
PMID:33519891
Quantitative Proteomic Profiling of Marine Diatom Skeletonema dohrnii in Response to Temperature and Silicate Induced Environmental Stress.
PMID:33519723
High Throughput Sequencing of MicroRNA in Rainbow Trout Plasma, Mucus, and Surrounding Water Following Acute Stress.
PMID:33519501
Insights into triterpene synthesis and unsaturated fatty-acid accumulation provided by chromosomal-level genome analysis of Akebia trifoliata subsp. australis.
PMID:33518712
A novel microbiome metabolic modulator improves the growth performance of broiler chickens in multiple trials and modulates targeted energy and amino acid metabolic pathways in the cecal metagenome.
PMID:33518302
Combined genomic, transcriptomic, and metabolomic analyses provide insights into chayote (Sechium edule) evolution and fruit development.
PMID:33517348
Amynthas corticis genome reveals molecular mechanisms behind global distribution.
PMID:33514865
Signalling pathways and mechanistic cues highlighted by transcriptomic analysis of primordial, primary, and secondary ovarian follicles in domestic cat.
PMID:33514822
Comparative gene expression analysis reveals that multiple mechanisms regulate the weeping trait in Prunus mume.
PMID:33514804
Transcriptome analysis reveals the long intergenic noncoding RNAs contributed to skeletal muscle differences between Yorkshire and Tibetan pig.
PMID:33514792
Verifying explainability of a deep learning tissue classifier trained on RNA-seq data.
PMID:33514769
Polycythemia Vera and Essential Thrombocythemia Patients Exhibit Unique Serum Metabolic Profiles Compared to Healthy Individuals and Secondary Thrombocytosis Patients.
PMID:33513807
CTD: An information-theoretic algorithm to interpret sets of metabolomic and transcriptomic perturbations in the context of graphical models.
PMID:33513132
Herbicide stress-induced DNA methylation changes in two Zea mays inbred lines differing in Roundup® resistance.
PMID:33512663
Identifying virulence determinants of multidrug-resistant Klebsiella pneumoniae in Galleria mellonella.
PMID:33512418
High-throughput screening in postimplantation haploid epiblast stem cells reveals Hs3st3b1 as a modulator for reprogramming.
PMID:33511777
A control theoretic three timescale model for analyzing energy management in mammalian cancer cells.
PMID:33510857
Gene signature of children with severe respiratory syncytial virus infection.
PMID:33510411
Genome-wide comparative analyses reveal selection signatures underlying adaptation and production in Tibetan and Poll Dorset sheep.
PMID:33510350
Systematic profiling of the effective ingredients and mechanism of Scabiosa comosa and S. tschilliensis against hepatic fibrosis combined with network pharmacology.
PMID:33510287
Inhibition of mitochondrial function by metformin increases glucose uptake, glycolysis and GDF-15 release from intestinal cells.
PMID:33510216
Development and characterization of patient-derived xenografts from non-small cell lung cancer brain metastases.
PMID:33510214
[Pregnancy-preserving and maternal-fetal management in a patient with rare large cell neuroendocrine carcinoma of the uterine cervix].
PMID:33509747
The Epstein-Barr virus deubiquitinase BPLF1 targets SQSTM1/p62 to inhibit selective autophagy.
PMID:33509017
ICN: Extracting interconnected communities in gene Co-expression networks.
PMID:33508087
Vertical sleeve gastrectomy induces distinctive transcriptomic responses in liver, fat and muscle.
PMID:33504853
Integrative analysis of transcriptomic data for identification of T-cell activation-related mRNA signatures indicative of preterm birth.
PMID:33504832
Identifying RNA Biomarkers and Molecular Pathways Involved in Multiple Subtypes of Uveitis.
PMID:33503442
Transcriptomic markers in pediatric septic shock prognosis: an integrative analysis of gene expression profiles.
PMID:33503200
Network pharmacology integrated molecular docking reveals the bioactive components and potential targets of Morinda officinalis-Lycium barbarum coupled-herbs against oligoasthenozoospermia.
PMID:33500463
Seasonal dynamics and starvation impact on the gut microbiome of urochordate ascidian Halocynthia roretzi.
PMID:33499981
Development of the equine hindgut microbiome in semi-feral and domestic conventionally-managed foals.
PMID:33499959
In Silico Inference of Synthetic Cytotoxic Interactions from Paclitaxel Responses.
PMID:33499282
Genome-resolved metagenomics reveals site-specific diversity of episymbiotic CPR bacteria and DPANN archaea in groundwater ecosystems.
PMID:33495623
Clinical Responsiveness to All-trans Retinoic Acid Is Potentiated by LSD1 Inhibition and Associated with a Quiescent Transcriptome in Myeloid Malignancies.
PMID:33495312
A network pharmacology perspective for deciphering potential mechanisms of action of Solanum nigrum L. in bladder cancer.
PMID:33494738
Cancers in Agreement? Exploring the Cross-Talk of Cancer Metabolomic and Transcriptomic Landscapes Using Publicly Available Data.
PMID:33494351
Nanoemulsions of Satureja montana Essential Oil: Antimicrobial and Antibiofilm Activity against Avian Escherichia coli Strains.
PMID:33494240
Cross-platform genomic identification and clinical validation of breast cancer diagnostic biomarkers.
PMID:33493140
Short hairpin RNA attenuates liver fibrosis by regulating the PPAR‑γ and NF‑κB pathways in HBV‑induced liver fibrosis in mice.
PMID:33491741
Propionic acid production from apple pomace in bioreactor using Propionibacterium freudenreichii: an economic analysis of the process.
PMID:33489679
iMPTCE-Hnetwork: A Multilabel Classifier for Identifying Metabolic Pathway Types of Chemicals and Enzymes with a Heterogeneous Network.
PMID:33488764
Transcriptomic and Network Analysis of Minor Salivary Glands of Patients With Primary Sjögren's Syndrome.
PMID:33488608
Gene co-expression network analysis of Trypanosoma brucei in tsetse fly vector.
PMID:33482903
Metagenomic analysis of the cow, sheep, reindeer and red deer rumen.
PMID:33479378
Network analysis of Down syndrome and SARS-CoV-2 identifies risk and protective factors for COVID-19.
PMID:33479353
Multi-omic analysis unveils biological pathways in peripheral immune system associated to minimal hepatic encephalopathy appearance in cirrhotic patients.
PMID:33479266
An empirical meta-analysis of the life sciences linked open data on the web.
PMID:33479214
Discovery and function exploration of microRNA-155 as a molecular biomarker for early detection of breast cancer.
PMID:33475963
MiR-144-3p is associated with pathological inflammation in patients infected with Mycobacteroides abscessus.
PMID:33473145
Global metabolomics profiling of colorectal cancer in Malaysian patients.
PMID:33469506
Review on Databases and Bioinformatic Approaches on Pharmacogenomics of Adverse Drug Reactions.
PMID:33469342
A genomic view of the microbiome of coral reef demosponges.
PMID:33469166
Weighted gene co-expression network analysis identifies molecular pathways and hub genes involved in broiler White Striping and Wooden Breast myopathies.
PMID:33469097
Blood-based protein profiling identifies serum protein c-KIT as a novel biomarker for hypertrophic cardiomyopathy.
PMID:33469076
Chronic exposure of humans to high level natural background radiation leads to robust expression of protective stress response proteins.
PMID:33469066
The relationships between microbiota and the amino acids and organic acids in commercial vegetable pickle fermented in rice-bran beds.
PMID:33469050
Global tissue transcriptomic analysis to improve genome annotation and unravel skin pigmentation in goldfish.
PMID:33469041
BAFF Inhibition Effectively Suppresses the Development of Anti-HLA.A2 Antibody in the Highly Sensitized Mouse Model.
PMID:33467096
Development of prognostic signature based on immune-related genes in muscle-invasive bladder cancer: bioinformatics analysis of TCGA database.
PMID:33465047
A multifaceted cellular damage repair and prevention pathway promotes high-level tolerance to β-lactam antibiotics.
PMID:33463026
RNA-Seq transcriptome analysis of ileum in Taiping chicken supplemented with the dietary probiotic.
PMID:33462736
Genome analysis of a halophilic bacterium Halomonas malpeensis YU-PRIM-29T reveals its exopolysaccharide and pigment producing capabilities.
PMID:33462335
Association of variably methylated tumour DNA regions with overall survival for invasive lobular breast cancer.
PMID:33461604
Prediction and mechanistic analysis of drug-induced liver injury (DILI) based on chemical structure.
PMID:33461600
Pathway crosstalk effects: Shrinkage and disentanglement using a Bayesian hierarchical model.
PMID:33456621
Newly discovered Asgard archaea Hermodarchaeota potentially degrade alkanes and aromatics via alkyl/benzyl-succinate synthase and benzoyl-CoA pathway.
PMID:33452484
Comprehensive computational target fishing approach to identify Xanthorrhizol putative targets.
PMID:33452398
lncRNA expression profiles and associated ceRNA network analyses in epicardial adipose tissue of patients with coronary artery disease.
PMID:33452392
Targeted metabolomics analysis of postoperative delirium.
PMID:33452279
Comprehensive Analysis of Cardiac Xeno-Graft Unveils Rejection Mechanisms.
PMID:33451076
Differentially expressed lncRNAs in liver tissues of TX mice with hepatolenticular degeneration.
PMID:33446761
Combined transcriptomic and lipidomic analysis reveals aberrant lipid metabolism in central nervous system hemangioblastomas.
PMID:33446752
Genomic adaptation of Pseudomonas strains to acidity and antibiotics in hydrothermal vents at Kolumbo submarine volcano, Greece.
PMID:33446715
Omega 3 fatty acids stimulate thermogenesis during torpor in the Arctic Ground Squirrel.
PMID:33446684
Multiscale Regulation of the Intervertebral Disc: Achievements in Experimental, In Silico, and Regenerative Research.
PMID:33445782
Diverse Taxonomies for Diverse Chemistries: Enhanced Representation of Natural Product Metabolism in UniProtKB.
PMID:33445429
Multiple microarray analyses identify key genes associated with the development of Non-Small Cell Lung Cancer from Chronic Obstructive Pulmonary Disease.
PMID:33442399
Transcriptional analysis reveals key insights into seasonal induced anthocyanin degradation and leaf color transition in purple tea (Camellia sinensis (L.) O. Kuntze).
PMID:33441891
Molecular mechanism of the anti-inflammatory effects of Sophorae Flavescentis Aiton identified by network pharmacology.
PMID:33441867
Immune modulation resulting from MR-guided high intensity focused ultrasound in a model of murine breast cancer.
PMID:33441763
MicroRNA expression profiling after recurrent febrile seizures in rat and emerging role of miR-148a-3p/SYNJ1 axis.
PMID:33441699
Structural and functional analysis of the Francisella lysine decarboxylase as a key actor in oxidative stress resistance.
PMID:33441661
TNF-α Regulates Human Plasmacytoid Dendritic Cells by Suppressing IFN-α Production and Enhancing T Cell Activation.
PMID:33441439
Blood-derived mitochondrial DNA copy number is associated with gene expression across multiple tissues and is predictive for incident neurodegenerative disease.
PMID:33441415
Disease severity-specific neutrophil signatures in blood transcriptomes stratify COVID-19 patients.
PMID:33441124
Application of graphical lasso in estimating network structure in gene set.
PMID:33437755
Prognosis Prediction for Colorectal Cancer Patients: A Risk Score Based on The Metabolic-Related Genes.
PMID:33437216
Individual fate and gut microbiome composition in the European wild rabbit (Oryctolagus cuniculus).
PMID:33436896
Alterations observed in the interferon α and β signaling pathway in MDD patients are marginally influenced by cis-acting alleles.
PMID:33436853
Gene expression in blood reflects smoking exposure among cancer-free women in the Norwegian Women and Cancer (NOWAC) postgenome cohort.
PMID:33436844
Transcriptomics analysis for the identification of potential age-related genes and cells associated with three major urogenital cancers.
PMID:33436826
Integrated mRNA and miRNA expression profile analysis of female and male gonads in Hyriopsis cumingii.
PMID:33436779
Genome wide methylation profiling of selected matched soft tissue sarcomas identifies methylation changes in metastatic and recurrent disease.
PMID:33436720
Comparative genomics and metabolomics analysis of Riemerella anatipestifer strain CH-1 and CH-2.
PMID:33436670
A logical network-based drug-screening platform for Alzheimer's disease representing pathological features of human brain organoids.
PMID:33436582
R-2-hydroxyglutarate attenuates aerobic glycolysis in leukemia by targeting the FTO/m6A/PFKP/LDHB axis.
PMID:33434505
Transcriptome profiling of insulin sensitive tissues from GH deficient mice following GH treatment.
PMID:33433889
Distribution of sigma factors delineates segregation of virulent and avirulent Mycobacterium.
PMID:33432378
Novel circRNA discovery in sheep shows evidence of high backsplice junction conservation.
PMID:33432020
Metagenomic analysis of formalin-fixed paraffin-embedded tumor and normal mucosa reveals differences in the microbiome of colorectal cancer patients.
PMID:33432015
The application of a biostimulant based on tannins affects root architecture and improves tolerance to salinity in tomato plants.
PMID:33432010
Ascending dorsal column sensory neurons respond to spinal cord injury and downregulate genes related to lipid metabolism.
PMID:33431991
A systems pharmacology approach to identify the autophagy-inducing effects of Traditional Persian medicinal plants.
PMID:33431946
A review of computational drug repositioning: strategies, approaches, opportunities, challenges, and directions.
PMID:33431024
Multi-responses of O-methyltransferase genes to salt stress and fiber development of Gossypium species.
PMID:33430775
Maternal folic acid impacts DNA methylation profile in male rat offspring implicated in neurodevelopment and learning/memory abilities.
PMID:33430764
MALDI TOF Mass Spectrometry Imaging of Blood Smear: Method Development and Evaluation.
PMID:33430160
Structure-Activity Relationship Modeling and Experimental Validation of the Imidazolium and Pyridinium Based Ionic Liquids as Potential Antibacterials of MDR Acinetobacter Baumannii and Staphylococcus Aureus.
PMID:33429999
TMEM158 May Serve as a Diagnostic Biomarker for Anaplastic Thyroid Carcinoma: An Integrated Bioinformatic Analysis.
PMID:33428142
Metabolites Associated with Early Cognitive Changes Implicated in Alzheimer's Disease.
PMID:33427733
Absence of NLRP3 Inflammasome in Hematopoietic Cells Reduces Adverse Remodeling After Experimental Myocardial Infarction.
PMID:33426377
Discriminating Microbial Community Structure Between Peri-Implantitis and Periodontitis With Integrated Metagenomic, Metatranscriptomic, and Network Analysis.
PMID:33425781
MicroRNAs Regulate Metabolic Phenotypes During Multicellular Tumor Spheroids Progression.
PMID:33425736
Secrete or perish: The role of secretion systems in Xanthomonas biology.
PMID:33425257
Dietary Lipid:Protein Ratio and n-3 Long-Chain Polyunsaturated Fatty Acids Alters the Gut Microbiome of Atlantic Salmon Under Hypoxic and Normoxic Conditions.
PMID:33424792
Saccharibacteria as Organic Carbon Sinks in Hydrocarbon-Fueled Communities.
PMID:33424787
Oyster Calcifying Fluid Harbors Persistent and Dynamic Autochthonous Bacterial Populations That May Aid in Shell Formation.
PMID:33424068
Identification of key modules and hub genes in glioblastoma multiforme based on co-expression network analysis.
PMID:33423377
Re-purposing software for functional characterization of the microbiome.
PMID:33422152
Combined whole cell wall analysis and streamlined in silico carbohydrate-active enzyme discovery to improve biocatalytic conversion of agricultural crop residues.
PMID:33422151
Use of Untargeted Metabolomics to Explore the Air Pollution-Related Disease Continuum.
PMID:33420964
Optimization of metabolite extraction and analytical methods from shrimp intestine for metabolomics profile analysis using LC-HRMS/MS.
PMID:33420663
Spatiotemporal Analysis of the Water and Sediment Nile Microbial Community Along an Urban Metropolis.
PMID:33420624
Gut microbiota impact on the peripheral immune response in non-alcoholic fatty liver disease related hepatocellular carcinoma.
PMID:33420074
Longitudinal evaluation of fecal microbiota transplantation for ameliorating calf diarrhea and improving growth performance.
PMID:33420064
Mammalian cell proliferation requires noncatalytic functions of O-GlcNAc transferase.
PMID:33419956
Gastric Adenocarcinomas and Signet-Ring Cell Carcinoma: Unraveling Gastric Cancer Complexity through Microbiome Analysis-Deepening Heterogeneity for a Personalized Therapy.
PMID:33419357
Transcriptome of nasopharyngeal samples from COVID-19 patients and a comparative analysis with other SARS-CoV-2 infection models reveal disparate host responses against SARS-CoV-2.
PMID:33413422
Temporal changes in DNA methylation and RNA expression in a small song bird: within- and between-tissue comparisons.
PMID:33413102
Genomic imbalances in the placenta are associated with poor fetal growth.
PMID:33413077
Phage infection and sub-lethal antibiotic exposure mediate Enterococcus faecalis type VII secretion system dependent inhibition of bystander bacteria.
PMID:33411815
Integration of gene expression data identifies key genes and pathways in colorectal cancer.
PMID:33411100
Machine Learning Models to Predict Primary Sites of Metastatic Cervical Carcinoma From Unknown Primary.
PMID:33408743
Transcriptome Analysis of the Cerebellum of Mice Fed a Manganese-Deficient Diet.
PMID:33408735
Type 2 diabetes mellitus-associated transcriptome alterations in cortical neurones and associated neurovascular unit cells in the ageing brain.
PMID:33407907
The complete genome sequence of Hafnia alvei A23BA; a potential antibiotic-producing rhizobacterium.
PMID:33407900
Analysis of sex differences in dietary copper-fructose interaction-induced alterations of gut microbial activity in relation to hepatic steatosis.
PMID:33407877
Genome-scale metabolic modeling underscores the potential of Cutaneotrichosporon oleaginosus ATCC 20509 as a cell factory for biofuel production.
PMID:33407779
Bioinformatics analysis of common key genes and pathways of intracranial, abdominal, and thoracic aneurysms.
PMID:33407182
ATAC-Seq identifies regions of open chromatin in the bronchial lymph nodes of dairy calves experimentally challenged with bovine respiratory syncytial virus.
PMID:33407093
Shared Blood Transcriptomic Signatures between Alzheimer's Disease and Diabetes Mellitus.
PMID:33406707
Sequencing, de novo assembly and annotation of Digitalis ferruginea subsp. schischkinii transcriptome.
PMID:33403559
Identification of Seven Cell Cycle-Related Genes with Unfavorable Prognosis and Construction of their TF-miRNA-mRNA regulatory network in Breast Cancer.
PMID:33403032
Temperature modulates immune gene expression in mosquitoes during arbovirus infection.
PMID:33401993
Genome survey sequencing and genetic diversity of cultivated Akebia trifoliata assessed via phenotypes and SSR markers.
PMID:33400074
Computationally predicted SARS-COV-2 encoded microRNAs target NFKB, JAK/STAT and TGFB signaling pathways.
PMID:33398248
Transcriptomic Analysis of a Diabetic Skin-Humanized Mouse Model Dissects Molecular Pathways Underlying the Delayed Wound Healing Response.
PMID:33396192
Effect of Senecio scandens ethanol extract on gut microbiota composition in mice.
PMID:33394080
DYRK1A regulates B cell acute lymphoblastic leukemia through phosphorylation of FOXO1 and STAT3.
PMID:33393494
Epigenome-wide association study (EWAS) for potential transgenerational disease epigenetic biomarkers in sperm following ancestral exposure to the pesticide methoxychlor.
PMID:33391823
Specific MiRNAs in naïve T cells associated with Hepatitis C Virus-induced Hepatocellular Carcinoma.
PMID:33391397
The Large Scale Structure of Human Metabolism Reveals Resilience via Extensive Signaling Crosstalk.
PMID:33391012
Discovery of acquired molecular signature on immune checkpoint inhibitors in paired tumor tissues.
PMID:33389015
Zone of Interaction Between the Parasite and the Host: Protein Profile of the Body Cavity Fluid of Gasterosteus aculeatus L. Infected with the Cestode Schistocephalus solidus (Muller, 1776).
PMID:33387269
SkinBug: an artificial intelligence approach to predict human skin microbiome-mediated metabolism of biotics and xenobiotics.
PMID:33385118
Functional Gene Expression Differentiation of the Notch Signaling Pathway in Female Reproductive Tract Tissues-A Comprehensive Review With Analysis.
PMID:33384996
Seeing the forest for the trees: Retrieving plant secondary biochemical pathways from metabolome networks.
PMID:33384856
Integrated Analysis of Key Pathways and Drug Targets Associated With Vogt-Koyanagi-Harada Disease.
PMID:33384687
Metabolomic Analysis of Response to Nitrogen-Limiting Conditions in Yarrowia spp.
PMID:33383744
Feasible-metabolic-pathway-exploration technique using chemical latent space.
PMID:33381845
A Multi-Pronged Computational Pipeline for Prioritizing Drug Target Strategies for Latent Tuberculosis.
PMID:33381491
Changes in Cecal Microbiota and Short-chain Fatty Acid During Lifespan of the Rat.
PMID:33380558
Transcriptomic Analysis of Naïve Human Embryonic Stem Cells Cultured in Three-Dimensional PEG Scaffolds.
PMID:33379237
Comparing Circadian Rhythmicity in the Human Gut Microbiome.
PMID:33377042
Isobaric tags for relative and absolute quantitation-based proteomics analysis of the effect of ginger oil on bisphenol A-induced breast cancer cell proliferation.
PMID:33376534
Effect of let-7c on the PI3K/Akt/FoxO signaling pathway in hepatocellular carcinoma.
PMID:33376529
A thermodynamic atlas of carbon redox chemical space.
PMID:33376214
The Developmental Transcriptome of Bagworm, Metisa plana (Lepidoptera: Psychidae) and Insights into Chitin Biosynthesis Genes.
PMID:33374651
Proteomic Signatures of Lifestyle Risk Factors for Cardiovascular Disease: A Cross-Sectional Analysis of the Plasma Proteome in the Framingham Heart Study.
PMID:33372532
Multipath: An R Package to Generate Integrated Reproducible Pathway Models.
PMID:33371258
Novel therapeutic compounds for prostate adenocarcinoma treatment: An analysis using bioinformatic approaches and the CMap database.
PMID:33371142
ProkSeq for complete analysis of RNA-Seq data from prokaryotes.
PMID:33367516
Whole Transcriptome Analysis Provides Insights Into the Molecular Mechanisms of Chlamydospore-Like Cell Formation in Phanerochaete chrysosporium.
PMID:33365015
Metabolic Engineering Strategies of Industrial Hemp (Cannabis sativa L.): A Brief Review of the Advances and Challenges.
PMID:33363552
iTRAQ-Based Phosphoproteomic Analysis of Toxoplasma gondii Tachyzoites Provides Insight Into the Role of Phosphorylation for its Invasion and Egress.
PMID:33363051
A Metagenome-Wide Association Study of Gut Microbiome in Patients With Multiple Sclerosis Revealed Novel Disease Pathology.
PMID:33363050
Comparative Transcriptome, Metabolome, and Ionome Analysis of Two Contrasting Common Bean Genotypes in Saline Conditions.
PMID:33362832
A Clinical Extensively-Drug Resistant (XDR) Escherichia coli and Role of Its β-Lactamase Genes.
PMID:33362736
Traditional Human Populations and Nonhuman Primates Show Parallel Gut Microbiome Adaptations to Analogous Ecological Conditions.
PMID:33361321
Effect of dietary oil from Camelina sativa on the growth performance, fillet fatty acid profile and gut microbiome of gilthead Sea bream (Sparus aurata).
PMID:33354421
Identification of key genes and pathways in endometriosis by integrated expression profiles analysis.
PMID:33354413
CHOmics: A web-based tool for multi-omics data analysis and interactive visualization in CHO cell lines.
PMID:33351794
Essential interpretations of bioinformatics in COVID-19 pandemic.
PMID:33349792
CheckV assesses the quality and completeness of metagenome-assembled viral genomes.
PMID:33349699
ARPIR: automatic RNA-Seq pipelines with interactive report.
PMID:33349239
An Integrated Analysis of miRNA and Gene Expression Changes in Response to an Obesogenic Diet to Explore the Impact of Transgenerational Supplementation with Omega 3 Fatty Acids.
PMID:33348802
Recognition of plausible therapeutic agents to combat COVID-19: An omics data based combined approach.
PMID:33346100
Bioinformatics analysis identifies COL1A1, THBS2 and SPP1 as potential predictors of patient prognosis and immunotherapy response in gastric cancer.
PMID:33345281
Identification of Tamoxifen-Resistant Breast Cancer Cell Lines and Drug Response Signature.
PMID:33344500
An Investigation of the Molecular Mechanisms Underlying the Analgesic Effect of Jakyak-Gamcho Decoction: A Network Pharmacology Study.
PMID:33343676
Highly accurate diagnosis of papillary thyroid carcinomas based on personalized pathways coupled with machine learning.
PMID:33341874
An international classification of inherited metabolic disorders (ICIMD).
PMID:33340416
Comparison of thrombus, gut, and oral microbiomes in Korean patients with ST-elevation myocardial infarction: a case-control study.
PMID:33339953
Leaf proteome modulation and cytological features of seagrass Cymodocea nodosa in response to long-term high CO2 exposure in volcanic vents.
PMID:33339849
Impact of Helicobacter pylori Infection and Its Major Virulence Factor CagA on DNA Damage Repair.
PMID:33339161
Identification of a Candidate Starch Utilizing Strain of Prevotella albensis from Bovine Rumen.
PMID:33339094
A structurally unique Fusobacterium nucleatum tannase provides detoxicant activity against gallotannins and pathogen resistance.
PMID:33336898
Aspartame, acesulfame K and sucralose- influence on the metabolism of Escherichia coli.
PMID:33336183
Screening and Identification of Prognostic Tumor-Infiltrating Immune Cells and Genes of Endometrioid Endometrial Adenocarcinoma: Based on The Cancer Genome Atlas Database and Bioinformatics.
PMID:33335850
MicroRNA-451a prevents cutaneous squamous cell carcinoma progression via the 3-phosphoinositide-dependent protein kinase-1-mediated PI3K/AKT signaling pathway.
PMID:33335579
From Glucose to Lactate and Transiting Intermediates Through Mitochondria, Bypassing Pyruvate Kinase: Considerations for Cells Exhibiting Dimeric PKM2 or Otherwise Inhibited Kinase Activity.
PMID:33335484
Cerina: systematic circRNA functional annotation based on integrative analysis of ceRNA interactions.
PMID:33335165
A biomimetic engineered bone platform for advanced testing of prosthetic implants.
PMID:33335113
Impact of Staphylococcus aureus Small Colony Variants on Human Lung Epithelial Cells with Subsequent Influenza Virus Infection.
PMID:33333815
Gene expression profiling of SARS-CoV-2 infections reveal distinct primary lung cell and systemic immune infection responses that identify pathways relevant in COVID-19 disease.
PMID:33333559
A Chromosome-Level Genome Assembly of the Anglerfish Lophius litulon.
PMID:33329719
QTL mapping and candidate gene analysis of seed vigor-related traits during artificial aging in wheat (Triticum aestivum).
PMID:33328518
Genome sequencing and phylogenetic analysis of allotetraploid Salix matsudana Koidz.
PMID:33328474
A chromosome-scale reference genome of Lobularia maritima, an ornamental plant with high stress tolerance.
PMID:33328471
The genome and transcriptome analysis of snake gourd provide insights into its evolution and fruit development and ripening.
PMID:33328440
The de novo genome assembly of Tapiscia sinensis and the transcriptomic and developmental bases of androdioecy.
PMID:33328438
Identification of Hub Genes of Mesio Temporal Lobe Epilepsy and Prognostic Biomarkers of Brain Low-grade Gliomas Based on Bioinformatics Analysis.
PMID:33327771
Long non-coding RNAs expression profile and functional analysis of acute ischemic stroke.
PMID:33327229
Epigenome-wide association study for atrazine induced transgenerational DNA methylation and histone retention sperm epigenetic biomarkers for disease.
PMID:33326428
mTORC1 Transcriptional Regulation of Ribosome Subunits, Protein Synthesis, and Molecular Transport in Primary Human Trophoblast Cells.
PMID:33324640
Comprehensive Transcriptomic Analysis Reveals Dysregulated Competing Endogenous RNA Network in Endocrine Resistant Breast Cancer Cells.
PMID:33324567
NF-κB Signaling Is Regulated by Fucosylation in Metastatic Breast Cancer Cells.
PMID:33322811
Differential Co-Expression Analyses Allow the Identification of Critical Signalling Pathways Altered during Tumour Transformation and Progression.
PMID:33322692
Genome sequencing of deep-sea hydrothermal vent snails reveals adaptions to extreme environments.
PMID:33319911
Different expression of lipid metabolism-related genes in Shandong black cattle and Luxi cattle based on transcriptome analysis.
PMID:33318614
Comparative proteomic analysis reveals novel insights into the interaction between rice and Xanthomonas oryzae pv. oryzae.
PMID:33317452
Statistical Optimisation of Phenol Degradation and Pathway Identification through Whole Genome Sequencing of the Cold-Adapted Antarctic Bacterium, Rhodococcus sp. Strain AQ5-07.
PMID:33316871
Micronutrient supplementation affects transcriptional and epigenetic regulation of lipid metabolism in a dose-dependent manner.
PMID:33315488
Chromosome-level genome assembly of the aphid parasitoid Aphidius gifuensis using Oxford Nanopore sequencing and Hi-C technology.
PMID:33314728
Effect of EZH2 on pulmonary artery smooth muscle cell migration in pulmonary hypertension.
PMID:33313943
Hierarchical Canonical Correlation Analysis Reveals Phenotype, Genotype, and Geoclimate Associations in Plants.
PMID:33313545
Long-term exposure of human endothelial cells to metformin modulates miRNAs and isomiRs.
PMID:33311640
A multivariable miRNA signature delineates the systemic hemodynamic impact of arteriovenous shunt placement in a pilot study.
PMID:33311598
Segregation distortion: high genetic load suggested by a Chinese shrimp family under high-intensity selection.
PMID:33311524
A meta-learning approach for genomic survival analysis.
PMID:33311484
Tissue-specific Gene Expression Changes Are Associated with Aging in Mice.
PMID:33309863
Improved risk stratification in younger IDH wild-type glioblastoma patients by combining a 4-miRNA signature with MGMT promoter methylation status.
PMID:33305269
Comparative transcriptome profiling of pomegranate genotypes having resistance and susceptible reaction to Xanthomonas axonopodis pv. punicae.
PMID:33304163
Multi-omic approach provides insights into osmoregulation and osmoconformation of the crab Scylla paramamosain.
PMID:33303836
Probiotic Lactobacillus fermentum strain JDFM216 improves cognitive behavior and modulates immune response with gut microbiota.
PMID:33303803
Understanding Mechanisms Underlying Non-Alcoholic Fatty Liver Disease (NAFLD) in Mental Illness: Risperidone and Olanzapine Alter the Hepatic Proteomic Signature in Mice.
PMID:33302598
A Comparison of Gene Expression Changes in the Blood of Individuals Consuming Diets Supplemented with Olives, Nuts or Long-Chain Omega-3 Fatty Acids.
PMID:33302351
Precision targeting of bacterial pathogen via bi-functional nanozyme activated by biofilm microenvironment.
PMID:33302119
DrivAER: Identification of driving transcriptional programs in single-cell RNA sequencing data.
PMID:33301553
Chromosome-level draft genome of a diploid plum (Prunus salicina).
PMID:33300949
BMP2 induces hMSC osteogenesis and matrix remodeling.
PMID:33300084
Next-generation sequencing analysis of circulating micro-RNA expression in response to parabolic flight as a spaceflight analogue.
PMID:33298968
Integrated Physiological and Transcriptomic Analyses Reveal a Regulatory Network of Anthocyanin Metabolism Contributing to the Ornamental Value in a Novel Hybrid Cultivar of Camellia Japonica.
PMID:33297392
An Integrated Bioinformatic Analysis of the S100 Gene Family for the Prognosis of Colorectal Cancer.
PMID:33294444
Are losartan and imatinib effective against SARS-CoV2 pathogenesis? A pathophysiologic-based in silico study.
PMID:33294307
Reconstruction of a directed acyclic graph with intervention.
PMID:33294093
Network Pharmacology-Based Study on the Mechanism of Gegen Qinlian Decoction against Colorectal Cancer.
PMID:33294000
An animal model study on the gene expression profile of meniscal degeneration.
PMID:33293598
Composition and geographic variation of the bacterial microbiota associated with the coelomic fluid of the sea urchin Paracentrotus lividus.
PMID:33293569
Donkey genomes provide new insights into domestication and selection for coat color.
PMID:33293529
Comprehensive Bioenergetic Evaluation of Microbial Pathway Variants in Syntrophic Propionate Oxidation.
PMID:33293404
LKB1 Differently Regulates Adipogenesis in Intramuscular and Subcutaneous Adipocytes through Metabolic and Cytokine-Related Signaling Pathways.
PMID:33291665
Maternal lipodome across pregnancy is associated with the neonatal DNA methylome.
PMID:33290095
Bioinformatic analysis of key pathways and genes involved in pediatric atopic dermatitis.
PMID:33289509
Hidden in plain sight: The effects of BCG vaccination in the COVID-19 pandemic.
PMID:33289122
Nitrogen recycling buffers against ammonia toxicity from skeletal muscle breakdown in hibernating arctic ground squirrels.
PMID:33288952
Matrix stiffness epigenetically regulates the oncogenic activation of the Yes-associated protein in gastric cancer.
PMID:33288878
TMEA: A Thermodynamically Motivated Framework for Functional Characterization of Biological Responses to System Acclimation.
PMID:33286800
Thermodynamic Limits and Optimality of Microbial Growth.
PMID:33286054
Chronic circadian shift leads to adipose tissue inflammation and fibrosis.
PMID:33285245
Interaction of preimplantation factor with the global bovine endometrial transcriptome.
PMID:33284816
Metabolic Landscape of the Mouse Liver by Quantitative 31 P Nuclear Magnetic Resonance Analysis of the Phosphorome.
PMID:33284502
Assembly of the non-heading pak choi genome and comparison with the genomes of heading Chinese cabbage and the oilseed yellow sarson.
PMID:33283404
Overexpression of exogenous biuret hydrolase in rice plants confers tolerance to biuret toxicity.
PMID:33283141
TTK, CDC25A, and ESPL1 as Prognostic Biomarkers for Endometrial Cancer.
PMID:33282948
A comparative UPLC-Q-Orbitrap-MS untargeted metabolomics investigation of different parts of Clausena lansium (Lour.) Skeels.
PMID:33282233
Identification of miRNA Biomarkers for Diverse Cancer Types Using Statistical Learning Methods at the Whole-Genome Scale.
PMID:33281862
High-Quality Genome-Scale Models From Error-Prone, Long-Read Assemblies.
PMID:33281796
Krüppel-Like Factors 9 and 13 Block Axon Growth by Transcriptional Repression of Key Components of the cAMP Signaling Pathway.
PMID:33281552
Replaying the evolutionary tape to investigate subgenome dominance in allopolyploid Brassica napus.
PMID:33280122
Conserved Epigenetic Regulatory Logic Infers Genes Governing Cell Identity.
PMID:33278344
Transcriptome comparison between pluripotent and non-pluripotent calli derived from mature rice seeds.
PMID:33277567
Transcriptome analysis reveals that exogenous ethylene activates immune and defense responses in a high late blight resistant potato genotype.
PMID:33277549
Complex subsurface hydrothermal fluid mixing at a submarine arc volcano supports distinct and highly diverse microbial communities.
PMID:33277434
The critical role of MetR/MetB/MetC/MetX in cysteine and methionine metabolism, fungal development and virulence of Alternaria alternata.
PMID:33277273
In-depth secretome analysis of Puccinia striiformis f. sp. tritici in infected wheat uncovers effector functions.
PMID:33275764
Screening of T Cell-Related Long Noncoding RNA-MicroRNA-mRNA Regulatory Networks in Non-Small-Cell Lung Cancer.
PMID:33274216
Physiological and transcriptomic analyses reveal the roles of secondary metabolism in the adaptive responses of Stylosanthes to manganese toxicity.
PMID:33272205
MethHC 2.0: information repository of DNA methylation and gene expression in human cancer.
PMID:33270889
Tgfb3 and Mmp13 regulated the initiation of liver fibrosis progression as dynamic network biomarkers.
PMID:33269546
SITC cancer immunotherapy resource document: a compass in the land of biomarker discovery.
PMID:33268350
Candida Species (Volatile) Metabotyping through Advanced Comprehensive Two-Dimensional Gas Chromatography.
PMID:33266330
Deep Learning in LncRNAome: Contribution, Challenges, and Perspectives.
PMID:33266128
Ensemble Estimation of Information Divergence †.
PMID:33265649
YAP/TAZ deficiency reprograms macrophage phenotype and improves infarct healing and cardiac function after myocardial infarction.
PMID:33264286
Gene Transfer Agents in Symbiotic Microbes.
PMID:33263868
Predicting the relationships between gut microbiota and mental disorders with knowledge graphs.
PMID:33262885
Functionally impaired plasmacytoid dendritic cells and non-haematopoietic sources of type I interferon characterize human autoimmunity.
PMID:33262343
A Paradox in Bacterial Pathogenesis: Activation of the Local Macrophage Inflammasome Is Required for Virulence of Streptococcus uberis.
PMID:33260788
Chromosomal assembly of the Antarctic toothfish ( Dissostichus mawsoni) genome using third-generation DNA sequencing and Hi-C technology.
PMID:33258338
Diversification of methanogens into hyperalkaline serpentinizing environments through adaptations to minimize oxidant limitation.
PMID:33257813
Elucidating Essential Genes in Plant-Associated Pseudomonas protegens Pf-5 Using Transposon Insertion Sequencing.
PMID:33257523
MiR-215-5p Reduces Liver Metastasis in an Experimental Model of Colorectal Cancer through Regulation of ECM-Receptor Interactions and Focal Adhesion.
PMID:33255928
Application of Differential Network Enrichment Analysis for Deciphering Metabolic Alterations.
PMID:33255384
Identifying longevity associated genes by integrating gene expression and curated annotations.
PMID:33253142
Evolved bacterial resistance against fluoropyrimidines can lower chemotherapy impact in the Caenorhabditis elegans host.
PMID:33252330
Genome-Scale Metabolic Modeling for Unraveling Molecular Mechanisms of High Threat Pathogens.
PMID:33251208
The Draft Genome of Red Lechwe, Kobus leche leche.
PMID:33250921
Selective Bacterial Colonization of the Murine Larynx in a Gnotobiotic Model.
PMID:33250883
Manganese Depletion Leads to Multisystem Changes in the Transcriptome of the Opportunistic Pathogen Streptococcus sanguinis.
PMID:33250881
iTRAQ-based proteomics reveals serum protein changes in hypertensive rats induced by a high-salt diet.
PMID:33250683
Multi-omics integration in biomedical research - A metabolomics-centric review.
PMID:33248648
Transcriptional response of human articular chondrocytes treated with fibronectin fragments: an in vitro model of the osteoarthritis phenotype.
PMID:33248223
Effects of dietary n-3-PUFA supplementation, post-insemination plane of nutrition and pregnancy status on the endometrial transcriptome of beef heifers.
PMID:33247230
Environmental flexibility does not explain metabolic robustness.
PMID:33247119
Comparative transcriptome analysis of scaled and scaleless skins in Gymnocypris eckloni provides insights into the molecular mechanism of scale degeneration.
PMID:33246415
Does the proteasome inhibitor bortezomib sensitize to DNA-damaging therapy in gastroenteropancreatic neuroendocrine neoplasms? - A preclinical assessment in vitro and in vivo.
PMID:33246310
Single-cell RNA sequencing and lipidomics reveal cell and lipid dynamics of fat infiltration in skeletal muscle.
PMID:33244879
Depthwise microbiome and isotopic profiling of a moderately saline microbial mat in a solar saltern.
PMID:33244085
Salt-responsive transcriptome analysis of triticale reveals candidate genes involved in the key metabolic pathway in response to salt stress.
PMID:33244037
scREAD: A Single-Cell RNA-Seq Database for Alzheimer's Disease.
PMID:33241205
Differential expression between drought-tolerant and drought-sensitive sugarcane under mild and moderate water stress as revealed by a comparative analysis of leaf transcriptome.
PMID:33240580
Polyphyllin VII suppresses cell proliferation, the cell cycle and cell migration in colorectal cancer.
PMID:33240431
Identification of Novel BRCA1 and RAD50 Mutations Associated With Breast Cancer Predisposition in Tunisian Patients.
PMID:33240314
Assessing the Risk of Transfer of Microorganisms at the International Space Station Due to Cargo Delivery by Commercial Resupply Vehicles.
PMID:33240227
Functional characterisation of the transcriptome from leaf tissue of the fluoroacetate-producing plant, Dichapetalum cymosum, in response to mechanical wounding.
PMID:33239700
Single cell profiling of capillary blood enables out of clinic human immunity studies.
PMID:33239690
Integrative genomic meta-analysis reveals novel molecular insights into cystic fibrosis and ΔF508-CFTR rescue.
PMID:33239626
MicroRNAs and Mammarenaviruses: Modulating Cellular Metabolism.
PMID:33238430
Reduced lipolysis in lipoma phenocopies lipid accumulation in obesity.
PMID:33235355
Uncovering the pharmacological mechanism of the effects of the Banxia-Xiakucao Chinese Herb Pair on sleep disorder by a systems pharmacology approach.
PMID:33235305
Transcriptome analyses reveals the dynamic nature of oil accumulation during seed development of Plukenetia volubilis L.
PMID:33235240
Anti-Tick Microbiota Vaccine Impacts Ixodes ricinus Performance during Feeding.
PMID:33233316
Androgen Signaling Regulates SARS-CoV-2 Receptor Levels and Is Associated with Severe COVID-19 Symptoms in Men.
PMID:33232663
Associations of the gut microbiome and clinical factors with acute GVHD in allogeneic HSCT recipients.
PMID:33232475
Investigation of drugs affecting hypertension in bevacizumab-treated patients and examination of the impact on the therapeutic effect.
PMID:33231381
Limits to the cellular control of sequestered cryptophyte prey in the marine ciliate Mesodinium rubrum.
PMID:33230263
Inhibition of 3-phosphoinositide-dependent protein kinase 1 (PDK1) can revert cellular senescence in human dermal fibroblasts.
PMID:33229519
ClpX Is Essential and Activated by Single-Strand DNA Binding Protein in Mycobacteria.
PMID:33229461
Gene Mapping, Genome-Wide Transcriptome Analysis, and WGCNA Reveals the Molecular Mechanism for Triggering Programmed Cell Death in Rice Mutant pir1.
PMID:33228024
In silico identification of effector proteins from generalist herbivore Spodoptera litura.
PMID:33225897
The expression of the acarbose biosynthesis gene cluster in Actinoplanes sp. SE50/110 is dependent on the growth phase.
PMID:33225887
Investigation of the Potential Mechanism Governing the Effect of the Shen Zhu San on COVID-19 by Network Pharmacology.
PMID:33224256
Systems toxicogenomics of prenatal low-dose BPA exposure on liver metabolic pathways, gut microbiota, and metabolic health in mice.
PMID:33221593
MolluscDB: an integrated functional and evolutionary genomics database for the hyper-diverse animal phylum Mollusca.
PMID:33219670
Unique maternal immune and functional microbial profiles during prenatal stress.
PMID:33219314
Identification and quantification of target metabolites combined with transcriptome of two rheum species focused on anthraquinone and flavonoids biosynthesis.
PMID:33219248
Circulating miRNA-181b-5p, miRNA-223-3p, miRNA-210-3p, let 7i-5p, miRNA-21-5p and miRNA-29a-3p in patients with localized scleroderma as potential biomarkers.
PMID:33214624
LOXL2 promotes aggrecan and gender-specific anabolic differences to TMJ cartilage.
PMID:33214607
Variable Selection in Untargeted Metabolomics and the Danger of Sparsity.
PMID:33213095
Proteogenomic Landscape of Breast Cancer Tumorigenesis and Targeted Therapy.
PMID:33212010
BAP1 mutant uveal melanoma is stratified by metabolic phenotypes with distinct vulnerability to metabolic inhibitors.
PMID:33208912
Elevated CO2 and nitrate levels increase wheat root-associated bacterial abundance and impact rhizosphere microbial community composition and function.
PMID:33208893
Machine learning approaches reveal genomic regions associated with sugarcane brown rust resistance.
PMID:33208862
RNA sequencing as an alternative tool for detecting measurable residual disease in core-binding factor acute myeloid leukemia.
PMID:33208771
The effect of hypoxia on the proteomic signature of pig adipose-derived stromal/stem cells (pASCs).
PMID:33208768
Comprehensive ESI-Q TRAP-MS/MS based characterization of metabolome of two mango (Mangifera indica L) cultivars from China.
PMID:33208758
8-Hydroxydaidzein, an Isoflavone from Fermented Soybean, Induces Autophagy, Apoptosis, Differentiation, and Degradation of Oncoprotein BCR-ABL in K562 Cells.
PMID:33207739
BCG Vaccination Induces Long-Term Functional Reprogramming of Human Neutrophils.
PMID:33207187
Evolution of Oxidative Phosphorylation (OXPHOS) Genes Reflecting the Evolutionary and Life Histories of Fig Wasps (Hymenoptera, Chalcidoidea).
PMID:33203150
Microarray expression profile analysis of circular RNAs and their potential regulatory role in bladder carcinoma.
PMID:33200221
Potential virus-mediated nitrogen cycling in oxygen-depleted oceanic waters.
PMID:33199808
Awakening a latent carbon fixation cycle in Escherichia coli.
PMID:33199707
Transcriptional response of Bacillus megaterium FDU301 to PEG200-mediated arid stress.
PMID:33198631
Towards a More Reliable Identification of Isomeric Metabolites Using Pattern Guided Retention Validation.
PMID:33198249
Transcriptome Analysis Identifies SenZfp536, a Sense LncRNA that Suppresses Self-renewal of Cortical Neural Progenitors.
PMID:33196962
A comparison of mRNA and circRNA expression between squamous cell carcinoma and adenocarcinoma of the lungs.
PMID:33196759
CXC Chemokine/Receptor Axis Profile and Metastasis in Prostate Cancer.
PMID:33195424
A Middle-Out Modeling Strategy to Extend a Colon Cancer Logical Model Improves Drug Synergy Predictions in Epithelial-Derived Cancer Cell Lines.
PMID:33195403
Integrated transcriptome meta-analysis of pancreatic ductal adenocarcinoma and matched adjacent pancreatic tissues.
PMID:33194391
Differentially expressed serum proteins in children with or without asthma as determined using isobaric tags for relative and absolute quantitation proteomics.
PMID:33194371
Contributions of Adaptive Plant Architecture to Transgressive Salinity Tolerance in Recombinant Inbred Lines of Rice: Molecular Mechanisms Based on Transcriptional Networks.
PMID:33193743
Transcriptome Analyses of β-Thalassemia -28(A>G) Mutation Using Isogenic Cell Models Generated by CRISPR/Cas9 and Asymmetric Single-Stranded Oligodeoxynucleotides (assODNs).
PMID:33193694
Plant miRNAs Reduce Cancer Cell Proliferation by Targeting MALAT1 and NEAT1: A Beneficial Cross-Kingdom Interaction.
PMID:33193626
Identification of Potential Core Genes Associated With the Progression of Stomach Adenocarcinoma Using Bioinformatic Analysis.
PMID:33193601
Insights Into the Albinism Mechanism for Two Distinct Color Morphs of Northern Snakehead, Channa argus Through Histological and Transcriptome Analyses.
PMID:33193565
The Eruca sativa Genome and Transcriptome: A Targeted Analysis of Sulfur Metabolism and Glucosinolate Biosynthesis Pre and Postharvest.
PMID:33193472
Interpretations of Environmental Microbial Community Studies Are Biased by the Selected 16S rRNA (Gene) Amplicon Sequencing Pipeline.
PMID:33193131
GWAS SNPs Impact Shared Regulatory Pathways Amongst Multimorbid Psychiatric Disorders and Cognitive Functioning.
PMID:33192679
Transcriptome Analysis and Knockdown of the Juvenile Hormone Esterase Gene Reveal Abnormal Feeding Behavior in the Sugarcane Giant Borer.
PMID:33192604
Virtual screening and network pharmacology-based synergistic mechanism identification of multiple components contained in Guanxin V against coronary artery disease.
PMID:33187508
Analysis of miR-9-5p, miR-124-3p, miR-21-5p, miR-138-5p, and miR-1-3p in Glioblastoma Cell Lines and Extracellular Vesicles.
PMID:33187334
Mechanisms of EGFR Resistance in Glioblastoma.
PMID:33187135
Whole-Genome Transcriptome Analyses of Native Symbionts Reveal Host Coral Genomic Novelties for Establishing Coral-Algae Symbioses.
PMID:33185681
LncRNA and mRNA expression profile of peripheral blood mononuclear cells in primary Sjögren's syndrome patients.
PMID:33184486
The effect of Rbfox2 modulation on retinal transcriptome and visual function.
PMID:33184471
Transcriptome profiling and weighted gene co-expression network analysis of early floral development in Aquilegia coerulea.
PMID:33184405
Insights into malaria pathogenesis gained from host metabolomics.
PMID:33180883
TISCH: a comprehensive web resource enabling interactive single-cell transcriptome visualization of tumor microenvironment.
PMID:33179754
Bioinformatic Analysis Identifies Potential Key Genes in the Pathogenesis of Melanoma.
PMID:33178610
Cryptosporidium parvum Infection Depletes Butyrate Producer Bacteria in Goat Kid Microbiome.
PMID:33178145
Transcriptome Profiling and Cytological Assessments for Identifying Regulatory Pathways Associated With Diorcinol N-Induced Autophagy in A3 Cells.
PMID:33178020
A network-based approach to deciphering a dynamic microbiome's response to a subtle perturbation.
PMID:33177547
Changes in transcriptomic and metabolomic profiles of morphotypes of Ophiocordyceps sinensis within the hemocoel of its host larvae, Thitarodes xiaojinensis.
PMID:33176684
MitoCarta3.0: an updated mitochondrial proteome now with sub-organelle localization and pathway annotations.
PMID:33174596
Co‑expression network analysis identified specific miRNAs and genes in association with slow‑transit constipation.
PMID:33174045
Narasin inhibits tumor metastasis and growth of ERα‑positive breast cancer cells by inactivation of the TGF‑β/SMAD3 and IL‑6/STAT3 signaling pathways.
PMID:33174044
Upregulated lnc‑HRK‑2:1 prompts nucleus pulposus cell senescence in intervertebral disc degeneration.
PMID:33174041
Identification of inflammation‑associated circulating long non‑coding RNAs and genes in intracranial aneurysm rupture‑induced subarachnoid hemorrhage.
PMID:33174039
Using mRNA deep sequencing to analyze differentially expressed genes during Panax notoginseng saponin treatment of ischemic stroke.
PMID:33173991
Cytokines CCL2 and CXCL1 may be potential novel predictors of early bone loss.
PMID:33173955
Integrated microarray analysis of key genes and a miRNA‑mRNA regulatory network of early‑onset preeclampsia.
PMID:33173953
Developmental differences in the intestinal microbiota of Chinese 1-year-old infants and 4-year-old children.
PMID:33173227
Lung transcriptome of a COVID-19 patient and systems biology predictions suggest impaired surfactant production which may be druggable by surfactant therapy.
PMID:33173052
Cancer Alters the Metabolic Fingerprint of Extracellular Vesicles.
PMID:33172086
Response of Horticultural Soil Microbiota to Different Fertilization Practices.
PMID:33171888
Differential Expression Profiling Reveals Stress-Induced Cell Fate Divergence in Soybean Microspores.
PMID:33171842
A Novel Aminoacyl-tRNA Synthetase Appended Domain Can Supply the Core Synthetase with Its Amino Acid Substrate.
PMID:33171705
Biological network analysis with deep learning.
PMID:33169146
Deciphering cell-cell interactions and communication from gene expression.
PMID:33168968
Pathway information extracted from 25 years of pathway figures.
PMID:33168034
Identifying genetic variants associated with ritodrine-induced pulmonary edema.
PMID:33166306
Ethnobotany and the Role of Plant Natural Products in Antibiotic Drug Discovery.
PMID:33164487
Comparative Transcriptome Analysis of the Regenerating Zebrafish Telencephalon Unravels a Resource With Key Pathways During Two Early Stages and Activation of Wnt/β-Catenin Signaling at the Early Wound Healing Stage.
PMID:33163496
Metabolic Perturbations Caused by the Over-Expression of mcr-1 in Escherichia coli.
PMID:33162965
Microbial Key Players Involved in P Turnover Differ in Artificial Soil Mixtures Depending on Clay Mineral Composition.
PMID:33161521
Bioinformatics-based identification of miRNA-, lncRNA-, and mRNA-associated ceRNA networks and potential biomarkers for preeclampsia.
PMID:33157942
Drug sensitivity prediction with normal inverse Gaussian shrinkage informed by external data.
PMID:33155717
Omics approaches for conservation biology research on the bivalve Chamelea gallina.
PMID:33154500
RNA Sequencing Reveals Diverse Functions of Amniotic Fluid Neutrophils and Monocytes/Macrophages in Intra-Amniotic Infection.
PMID:33152737
Isolation and sequence-based characterization of a koala symbiont: Lonepinella koalarum.
PMID:33150080
Potential Molecular Mechanisms of Plantain in the Treatment of Gout and Hyperuricemia Based on Network Pharmacology.
PMID:33149752
Desmoglein 3 and Keratin 14 for Distinguishing Between Lung Adenocarcinoma and Lung Squamous Cell Carcinoma.
PMID:33149622
Characterization of somatic mutation-associated microenvironment signatures in acute myeloid leukemia patients based on TCGA analysis.
PMID:33149230
Airway Microbiota-Host Interactions Regulate Secretory Leukocyte Protease Inhibitor Levels and Influence Allergic Airway Inflammation.
PMID:33147448
Metagenomic Analysis Exploring Taxonomic and Functional Diversity of Soil Microbial Communities in Sugarcane Fields Applied with Organic Fertilizer.
PMID:33145361
Exploration in the Mechanism of Kaempferol for the Treatment of Gastric Cancer Based on Network Pharmacology.
PMID:33145355
Comparative physiological and transcriptomic analysis of pear leaves under distinct training systems.
PMID:33144674
Transcriptomic profiling of feline teeth highlights the role of matrix metalloproteinase 9 (MMP9) in tooth resorption.
PMID:33144645
Analysis of a radiation-induced dwarf mutant of a warm-season turf grass reveals potential mechanisms involved in the dwarfing mutant.
PMID:33144613
Broad genic repression domains signify enhanced silencing of oncogenes.
PMID:33144558
Microbiota-Derived Short-Chain Fatty Acids Promote LAMTOR2-Mediated Immune Responses in Macrophages.
PMID:33144310
Seasonal Patterns of Dominant Microbes Involved in Central Nutrient Cycles in the Subsurface.
PMID:33143231
Revealing Alteration in the Hepatic Glucose Metabolism of Genetically Improved Carp, Jayanti Rohu Labeo rohita Fed a High Carbohydrate Diet Using Transcriptome Sequencing.
PMID:33142948
Integrated analysis of phosphoproteome and ubiquitylome in epididymal sperm of buffalo (Bubalus bubalis).
PMID:33140506
β-Barrels covalently link peptidoglycan and the outer membrane in the α-proteobacterium Brucella abortus.
PMID:33139884
Extraction and Integration of Genetic Networks from Short-Profile Omic Data Sets.
PMID:33137869
High Expression of UBB, RAC1, and ITGB1 Predicts Worse Prognosis among Nonsmoking Patients with Lung Adenocarcinoma through Bioinformatics Analysis.
PMID:33134373
Functional and Clinical Characterization of Tumor-Infiltrating T Cell Subpopulations in Hepatocellular Carcinoma.
PMID:33133170
Epigenetic Programming Through Breast Milk and Its Impact on Milk-Siblings Mating.
PMID:33133155
From sequence to information.
PMID:33131436
An in-silico method leads to recognition of hub genes and crucial pathways in survival of patients with breast cancer.
PMID:33128008
Whole transcriptome analysis of adrenal glands from prenatal glucocorticoid programmed hypertensive rodents.
PMID:33127986
LAMP: disease classification derived from layered assessment on modules and pathways in the human gene network.
PMID:33126852
Long non‑coding RNA expression profiles identify lncRNA‑XLOC_I2_006631 as a potential novel blood biomarker for Hashimoto's thyroiditis.
PMID:33125100
Depletion of eukaryotic initiation factor 5B (eIF5B) reprograms the cellular transcriptome and leads to activation of endoplasmic reticulum (ER) stress and c-Jun N-terminal kinase (JNK).
PMID:33123915
The Oncometabolite 5'-Deoxy-5'-Methylthioadenosine Blocks Multiple Signaling Pathways of NK Cell Activation.
PMID:33123121
PUMAA: A Platform for Accessible Microbiome Analysis in the Undergraduate Classroom.
PMID:33123113
Local Conditions Influence the Prokaryotic Communities Associated With the Mesophotic Black Coral Antipathella subpinnata.
PMID:33123099
An Integrative Serum Pharmacology-Based Approach to Study the Anti-Tumor Activity of B. paniculatum Aqueous Bulb Extract on the Human Hepatocellular Carcinoma Cell Line BEL-7404.
PMID:33123002
Functional in vivo and in vitro effects of 20q11.21 genetic aberrations on hPSC differentiation.
PMID:33122739
Feature selection algorithm based on dual correlation filters for cancer-associated somatic variants.
PMID:33121438
The Status of Soil Microbiome as Affected by the Application of Phosphorus Biofertilizer: Fertilizer Enriched with Beneficial Bacterial Strains.
PMID:33121206
Impact of Zika Virus Infection on Human Neural Stem Cell MicroRNA Signatures.
PMID:33121145
Screening and identification of key genes and pathways in metastatic uveal melanoma based on gene expression using bioinformatic analysis.
PMID:33120861
Identification of key genes and pathways for melanoma in the TRIM family.
PMID:33118318
Common Adaptive Strategies Underlie Within-Host Evolution of Bacterial Pathogens.
PMID:33118035
RNA Profiling Reveals a Common Mechanism of Histone Gene Downregulation and Complementary Effects for Radioprotectants in Response to Ionizing Radiation.
PMID:33117095
Identification of Novel Therapeutic Molecular Targets in Inflammatory Bowel Disease by Using Genetic Databases.
PMID:33116744
Analysis of Differential Expression Proteins of Paclitaxel-Treated Lung Adenocarcinoma Cell A549 Using Tandem Mass Tag-Based Quantitative Proteomics.
PMID:33116610
RUNX3 methylation drives hypoxia-induced cell proliferation and antiapoptosis in early tumorigenesis.
PMID:33116296
Dynamic transcriptional response of Saccharomyces cerevisiae cells to copper.
PMID:33116258
Nuclear gene proximity and protein interactions shape transcript covariations in mammalian single cells.
PMID:33116115
Multiplexed Quantitative Assessment of the Fate of Taurine and Sulfoquinovose in the Intestinal Microbiome.
PMID:33114761
Correlation between the Antimicrobial Activity and Metabolic Profiles of Cell Free Supernatants and Membrane Vesicles Produced by Lactobacillus reuteri DSM 17938.
PMID:33114410
Differential Gene Expression in Brain and Liver Tissue of Wistar Rats after Rapid Eye Movement Sleep Deprivation.
PMID:33114225
Parallel Social Information Processing Circuits Are Differentially Impacted in Autism.
PMID:33113347
Genome-wide DNA methylation analysis of Hashimoto's thyroiditis during pregnancy.
PMID:33113271
Cp1/cathepsin L is required for autolysosomal clearance in Drosophila.
PMID:33112206
Mitochondrial gene signature in the prefrontal cortex for differential susceptibility to chronic stress.
PMID:33110158
Transcriptome analysis of chicken intraepithelial lymphocyte natural killer cells infected with very virulent infectious bursal disease virus.
PMID:33110122
Deciphering the Microbial Taxonomy and Functionality of Two Diverse Mangrove Ecosystems and Their Potential Abilities To Produce Bioactive Compounds.
PMID:33109752
Analysing the meta-interaction between pathways by gene set topological impact analysis.
PMID:33109101
Single-cell patterning and axis characterization in the murine and human definitive endoderm.
PMID:33106598
Data on chemical-gene interactions and biological categories enriched with genes sensitive to chemical exposures.
PMID:33102660
Cross-Sectional Transcriptional Analysis of the Aging Murine Heart.
PMID:33102519
Forkhead box P3 promotes breast cancer cell apoptosis by regulating programmed cell death 4 expression.
PMID:33101486
Plasmatic Membrane Expression of Adhesion Molecules in Human Cardiac Progenitor/Stem Cells Might Explain Their Superior Cell Engraftment after Cell Transplantation.
PMID:33101423
Systematic Identification of Hub Genes in Placenta Accreta Spectrum Based on Integrated Transcriptomic and Proteomic Analysis.
PMID:33101378
Genome-wide analysis of therapeutic response uncovers molecular pathways governing tamoxifen resistance in ER+ breast cancer.
PMID:33099086
Dietary Phytase- and Lactic Acid-Treated Cereals Caused Greater Taxonomic Adaptations than Functional Adaptations in the Cecal Metagenome of Growing Pigs.
PMID:33097516
Amino Sugars Reshape Interactions between Streptococcus mutans and Streptococcus gordonii.
PMID:33097515
Similarities and Differences of Photosynthesis Establishment Related mRNAs and Novel lncRNAs in Early Seedlings (Coleoptile/Cotyledon vs. True Leaf) of Rice and Arabidopsis.
PMID:33093843
Systems analysis of avascular necrosis of femoral head using integrative data analysis and literature mining delineates pathways associated with disease.
PMID:33093559
Chronic stress and antidepressant treatment alter purine metabolism and beta oxidation within mouse brain and serum.
PMID:33093530
In vivo vaccination with cell line-derived whole tumor lysates: neoantigen quality, not quantity matters.
PMID:33087163
A method for estimating coherence of molecular mechanisms in major human disease and traits.
PMID:33087046
Interferon-Mediated Long Non-Coding RNA Response in Macrophages in the Context of HIV.
PMID:33086748
Microbial community successions and their dynamic functions during harmful cyanobacterial blooms in a freshwater lake.
PMID:33086464
Integrated Proteomic and Glycoproteomic Characterization of Human High-Grade Serous Ovarian Carcinoma.
PMID:33086064
Integrative Analyses of Genes Associated with Fulminant Type 1 Diabetes.
PMID:33083497
Identification of Key Genes Involved in Acute Myocardial Infarction by Comparative Transcriptome Analysis.
PMID:33083450
Network-Based Coexpression Analysis Identifies Functional and Prognostic Long Noncoding RNAs in Hepatocellular Carcinoma.
PMID:33083449
Transcriptome analysis reveals potential immune function-related regulatory genes/pathways of female Lubo goat submandibular glands at different developmental stages.
PMID:33083113
The genome of Chinese flowering cherry (Cerasus serrulata) provides new insights into Cerasus species.
PMID:33082971
Low expression of Talin1 is associated with advanced pathological features in colorectal cancer patients.
PMID:33082414
Insights into the Gryllus bimaculatus Immune-Related Transcriptomic Profiling to Combat Naturally Invading Pathogens.
PMID:33080980
Organophosphorus flame retardants are developmental neurotoxicants in a rat primary brainsphere in vitro model.
PMID:33078273
Finding disease modules for cancer and COVID-19 in gene co-expression networks with the Core&Peel method.
PMID:33077837
Epigenetic regulation of gene expression improves Fusarium head blight resistance in durum wheat.
PMID:33077800
Complementary Tendencies in the Use of Regulatory Elements (Transcription Factors, Sigma Factors, and Riboswitches) in Bacteria and Archaea.
PMID:33077635
Brain transcriptome analysis reveals subtle effects on mitochondrial function and iron homeostasis of mutations in the SORL1 gene implicated in early onset familial Alzheimer's disease.
PMID:33076949
Expression of mitochondrial protein genes encoded by nuclear and mitochondrial genomes correlate with energy metabolism in dairy cattle.
PMID:33076826
Shewanella oneidensis NADH dehydrogenase mutants exhibit an amino acid synthesis defect.
PMID:33072733
Cell Development Deficiency and Gene Expression Dysregulation of Trisomy 21 Retina Revealed by Single-Nucleus RNA Sequencing.
PMID:33072724
Gut Microbiota-Metabolome Changes in Children With Diarrhea by Diarrheagenic E. coli.
PMID:33072619
Alternative Splicing Enhances the Transcriptome Complexity of Liriodendron chinense.
PMID:33072153
Role of BgaA as a Pneumococcal Virulence Factor Elucidated by Molecular Evolutionary Analysis.
PMID:33072054
Transcriptomic Profiling of Various Developmental Stages of Aphis Aurantii to Provide a Genetic Resource for Gene Expression and SSR Analysis.
PMID:33071832
Unpaired data empowers association tests.
PMID:33070196
Distinct expression profiles of peptides in placentae from preeclampsia and normal pregnancies.
PMID:33067549
mRNA and miRNA expression profile reveals the role of miR-31 overexpression in neural stem cell.
PMID:33067542
Integrated genomics analysis highlights important SNPs and genes implicated in moderate-to-severe asthma based on GWAS and eQTL datasets.
PMID:33066754
Combined Transcriptome and Proteome Analysis of Masson Pine (Pinus massoniana Lamb.) Seedling Root in Response to Nitrate and Ammonium Supplementations.
PMID:33066140
Seeding Biochemistry on Other Worlds: Enceladus as a Case Study.
PMID:33064954
A practical guide to mechanistic systems modeling in biology using a logic-based approach.
PMID:33064138
Identification of G2 and S Phase-Expressed-1 as a Potential Biomarker in Patients with Prostate Cancer.
PMID:33061616
Exploration of the Potential Biomarkers of Papillary Thyroid Cancer (PTC) Based on RT2 Profiler PCR Arrays and Bioinformatics Analysis.
PMID:33061614
Identification of epigenetic variation associated with synchronous pod maturity in mungbean (Vigna radiata L.).
PMID:33060755
De novo transcriptome analysis of Chlorella sorokiniana: effect of glucose assimilation, and moderate light intensity.
PMID:33060668
Health and disease markers correlate with gut microbiome composition across thousands of people.
PMID:33060586
What happens after a blood meal? A transcriptome analysis of the main tissues involved in egg production in Rhodnius prolixus, an insect vector of Chagas disease.
PMID:33057354
In vivo estrogenicity of p-phenoxyphenol and p-pentyloxyphenol.
PMID:33057140
Petal abscission in fragrant roses is associated with large scale differential regulation of the abscission zone transcriptome.
PMID:33057097
smORFunction: a tool for predicting functions of small open reading frames and microproteins.
PMID:33054771
Temporal Proteomic Profiling of SH-SY5Y Differentiation with Retinoic Acid Using FAIMS and Real-Time Searching.
PMID:33054241
Effect of Citric Acid Cycle Genetic Variants and Their Interactions with Obesity, Physical Activity and Energy Intake on the Risk of Colorectal Cancer: Results from a Nested Case-Control Study in the UK Biobank.
PMID:33053772
Present and Future of Anti-Glioblastoma Therapies: A Deep Look into Molecular Dependencies/Features.
PMID:33053763
Human oral microbiome dysbiosis as a novel non-invasive biomarker in detection of colorectal cancer.
PMID:33052235
Identification of potential key genes and miRNAs involved in Hepatoblastoma pathogenesis and prognosis.
PMID:33051830
Learning graph representations of biochemical networks and its application to enzymatic link prediction.
PMID:33051674
Proteome Analysis of Walnut Bacterial Blight Disease.
PMID:33050347
Integrating Single-Step GWAS and Bipartite Networks Reconstruction Provides Novel Insights into Yearling Weight and Carcass Traits in Hanwoo Beef Cattle.
PMID:33050182
A Comparative Transcriptome Analysis, Conserved Regulatory Elements and Associated Transcription Factors Related to Accumulation of Fusariotoxins in Grain of Rye (Secale cereale L.) Hybrids.
PMID:33049995
Therapeutic Opportunities for Intestinal Angioectasia- Targeting PPARγ and Oxidative Stress.
PMID:33048460
Inhibition of O-GlcNAc transferase activates tumor-suppressor gene expression in tamoxifen-resistant breast cancer cells.
PMID:33046784
Role of a genetic variation in the microRNA-4421 binding site of ERP29 regarding risk of oropharynx cancer and prognosis.
PMID:33046743
Micro RNA Targets in HIV Latency: Insights into Novel Layers of Latency Control.
PMID:33045840
Perfluorooctanesulfonic Acid-Induced Toxicity on Zebrafish Embryos in the Presence or Absence of the Chorion.
PMID:33044770
SYTL4 downregulates microtubule stability and confers paclitaxel resistance in triple-negative breast cancer.
PMID:33042263
Transcriptome Analysis of Different Tissues Reveals Key Genes Associated With Galanthamine Biosynthesis in Lycoris longituba.
PMID:33042169
VapC21 Toxin Contributes to Drug-Tolerance and Interacts With Non-cognate VapB32 Antitoxin in Mycobacterium tuberculosis.
PMID:33042034
Genomic, proteomic, and systems biology approaches in biomarker discovery for multiple sclerosis.
PMID:33039896
Metformin elicits antitumour effect by modulation of the gut microbiota and rescues Fusobacterium nucleatum-induced colorectal tumourigenesis.
PMID:33039709
Analysis of microRNA-34a expression profile and rs2666433 variant in colorectal cancer: a pilot study.
PMID:33037254
Molecular pathways in patients with systemic lupus erythematosus revealed by gene-centred DNA sequencing.
PMID:33037003
DockCoV2: a drug database against SARS-CoV-2.
PMID:33035337
Gene-set Enrichment with Mathematical Biology (GEMB).
PMID:33034635
A review of protein-protein interaction network alignment: From pathway comparison to global alignment.
PMID:33033584
Identification of Potential Biomarkers for CAD Using Integrated Expression and Methylation Data.
PMID:33033488
Suppression of inflammatory arthritis in human serum paraoxonase 1 transgenic mice.
PMID:33033318
The interplay between host genetics and the gut microbiome reveals common and distinct microbiome features for complex human diseases.
PMID:33032658
Application of compound material alleviates saline and alkaline stress in cotton leaves through regulation of the transcriptome.
PMID:33032521
Data mining of human plasma proteins generates a multitude of highly predictive aging clocks that reflect different aspects of aging.
PMID:33031577
BioLitMine: Advanced Mining of Biomedical and Biological Literature About Human Genes and Genes from Major Model Organisms.
PMID:33028629
Identification of a new pseudogenes/lncRNAs-hsa-miR-26b-5p-COL12A1 competing endogenous RNA network associated with prognosis of pancreatic cancer using bioinformatics analysis.
PMID:33027767
Immunometabolism in the Single-Cell Era.
PMID:33027638
Network-based identification genetic effect of SARS-CoV-2 infections to Idiopathic pulmonary fibrosis (IPF) patients.
PMID:33024988
EAT-UpTF: Enrichment Analysis Tool for Upstream Transcription Factors of a Group of Plant Genes.
PMID:33024441
A glance at the gut microbiota of five experimental animal species through fecal samples.
PMID:33024229
HMGR overexpression and interference affect the expression of steroidogenic genes and cholesterol content in bovine intramuscular adipocytes.
PMID:33024216
Atribacteria Reproducing over Millions of Years in the Atlantic Abyssal Subseafloor.
PMID:33024037
Identification of Parkinson's disease-related pathways and potential risk factors.
PMID:33021140
A genome resource for green millet Setaria viridis enables discovery of agronomically valuable loci.
PMID:33020633
Identification of Key Genes in Gastric Cancer by Bioinformatics Analysis.
PMID:33015179
Putative genome features of relic green alga-derived nuclei in dinoflagellates and future perspectives as model organisms.
PMID:33014260
Cyberlindnera jadinii Yeast as a Protein Source for Weaned Piglets-Impact on Immune Response and Gut Microbiota.
PMID:33013844
Neural Network Deconvolution Method for Resolving Pathway-Level Progression of Tumor Clonal Expression Programs With Application to Breast Cancer Brain Metastases.
PMID:33013452
Mouse Genetic Reference Populations: Cellular Platforms for Integrative Systems Genetics.
PMID:33010949
Genome-wide identification of low phosphorus responsive microRNAs in two soybean genotypes by high-throughput sequencing.
PMID:33009591
Database: web application for visualization of the cumulated RNAseq data against the salicylic acid (SA) and methyl jasmonate (MeJA) treatment of Arabidopsis thaliana.
PMID:33008298
Differential network analysis of bovine muscle reveals changes in gene coexpression patterns in response to changes in maternal nutrition.
PMID:33008289
Oxidative pentose phosphate pathway and glucose anaplerosis support maintenance of mitochondrial NADPH pool under mitochondrial oxidative stress.
PMID:33005744
Molecular study of drought response in the Mediterranean conifer Pinus pinaster Ait.: Differential transcriptomic profiling reveals constitutive water deficit-independent drought tolerance mechanisms.
PMID:33005345
Integrated transcriptomic and metabolomic data reveal the flavonoid biosynthesis metabolic pathway in Perilla frutescens (L.) leaves.
PMID:33004940
Exploring celiac disease candidate pathways by global gene expression profiling and gene network cluster analysis.
PMID:33004927
Expression of fatty acid and triacylglycerol synthesis genes in interspecific hybrids of oil palm.
PMID:33004875
Transcriptomic signatures of cold adaptation and heat stress in the winter ant (Prenolepis imparis).
PMID:33002025
High-quality nuclear genome for Sarcoptes scabiei-A critical resource for a neglected parasite.
PMID:33001992
Uncovering potential differentially expressed miRNAs and targeted mRNAs in myocardial infarction based on integrating analysis.
PMID:33000230
Comparative transcriptome analysis to identify candidate genes involved in 2-methoxy-1,4-naphthoquinone (MNQ) biosynthesis in Impatiens balsamina L.
PMID:32999341
Antimicrobial Peptide Exposure Selects for Resistant and Fit Stenotrophomonas maltophilia Mutants That Show Cross-Resistance to Antibiotics.
PMID:32999081
Efficient Propagation of Circulating Tumor Cells: A First Step for Probing Tumor Metastasis.
PMID:32998338
Identification of the significant pathways of Banxia Houpu decoction in the treatment of depression based on network pharmacology.
PMID:32997725
IL6-mediated HCoV-host interactome regulatory net