Influenza Virus Database
Names
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Influenza Virus Database
metasource: Fairsharing.org
version: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
IVDB
metasource: Fairsharing.org
version: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
IVDB - Influenza Virus Database
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Names
More detailed information about this field from each metasource.
Influenza Virus Database
metasource: Fairsharing.orgversion: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
IVDB
metasource: Fairsharing.orgversion: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
IVDB - Influenza Virus Database
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Other names: IVDB, IVDB - Influenza Virus Database
Names
More detailed information about this field from each metasource.
Influenza Virus Database
metasource: Fairsharing.orgversion: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
IVDB
metasource: Fairsharing.orgversion: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
IVDB - Influenza Virus Database
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
This source may no longer be available. No known URL could be resolved successfully.
IVDB hosts complete genome sequences of influenza A virus generated by BGI and curates all other published influenza virus sequences after expert annotations. IVDB provides a series of tools and viewers for analyzing the viral genomes, genes, genetic polymorphisms and phylogenetic relationships comparatively.
Description
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IVDB hosts complete genome sequences of influenza A virus generated by BGI and curates all other published influenza virus sequences after expert annotations. IVDB provides a series of tools and viewers for analyzing the viral genomes, genes, genetic polymorphisms and phylogenetic relationships comparatively.
metasource: Fairsharing.orgversion: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Frequent outbreaks of highly pathogenic avian influenza and the increasing data available for comparative analysis require a central database specialized in influenza viruses. We have established the Influenza Virus Database (IVDB) to integrate information and create an analysis platform for genetic, genomic, and phylogenetic studies of the virus. IVDB hosts complete genome sequences of influenza A virus generated by Beijing Institute of Genomics and curates all other published influenza virus sequences after expert annotation. Our Q-Filter system classifies and ranks all nucleotide sequences into 7 categories according to sequence content and integrity. IVDB provides a series of tools and viewers for comparative analysis of the viral genomes, genes, genetic polymorphisms and phylogenetic relationships. A search system has been developed for users to retrieve a combination of different data types by setting search options. To facilitate analysis of global viral transmission and evolution, the IV Sequence Distribution Tool (IVDT) has been developed to display the worldwide geographic distribution of chosen viral genotypes and to couple genomic data with epidemiological data. The BLAST, multiple sequence alignment and phylogenetic analysis tools were integrated for online data analysis. Furthermore, IVDB offers instant access to pre-computed alignments and polymorphisms of influenza virus genes and proteins, and presents the results as SNP distribution plots and minor allele distributions.
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Webpage:
http://influenza.psych.ac.cn/Webpage
More detailed information about this field from each metasource.
http://influenza.psych.ac.cn/
metasource: Fairsharing.orgversion: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications:
Publications
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Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
PMID: 17065465
metasource: Fairsharing.org
version: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
Publications
More detailed information about this field from each metasource.
Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
PMID: 17065465
metasource: Fairsharing.org
version: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
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Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
PubMed citations: 27.
27 articles citing: Influenza Virus Database (IVDB): an integrated information resource and analysis platform for influenza virus research
Monitoring serologic response to single in ovo vaccination with an immune complex vaccine against infectious bursal disease in broilers. PMID:33610895
HopPER: an adaptive model for probability estimation of influenza reassortment through host prediction. PMID:31973709
Phylogenetic Analysis and Characterization of a Sporadic Isolate of Equine Influenza A H3N8 from an Unvaccinated Horse in 2015. PMID:29324680
Virus Database and Online Inquiry System Based on Natural Vectors. PMID:29308007
3DFlu: database of sequence and structural variability of the influenza hemagglutinin at population scale. PMID:27694207
Re-emergence of H3N2 strains carrying potential neutralizing mutations at the N-linked glycosylation site at the hemagglutinin head, post the 2009 H1N1 pandemic. PMID:27503338
A review on computational systems biology of pathogen-host interactions. PMID:25914674
Synthetic lethals in HIV: ways to avoid drug resistance : Running title: Preventing HIV resistance. PMID:25888435
Unraveling the web of viroinformatics: computational tools and databases in virus research. PMID:25428870
Prediction of biological functions on glycosylation site migrations in human influenza H1N1 viruses. PMID:22355413
Variability among the neuraminidase, non-structural 1 and PB1-F2 proteins in the influenza A virus genome. PMID:22261818
Influenza research database: an integrated bioinformatics resource for influenza research and surveillance. PMID:22260278
BFluenza: A Proteomic Database on Bird Flu. PMID:22125386
Glycosylation site alteration in the evolution of influenza A (H1N1) viruses. PMID:21829533
PhyloMap: an algorithm for visualizing relationships of large sequence data sets and its application to the influenza A virus genome. PMID:21689434
BiologicalNetworks--tools enabling the integration of multi-scale data for the host-pathogen studies. PMID:21235794
OpenFluDB, a database for human and animal influenza virus. PMID:20624713
Co-lethality studied as an asset against viral drug escape: the HIV protease case. PMID:20565756
ORION-VIRCAT: a tool for mapping ICTV and NCBI taxonomies. PMID:20157487
In vitro responses to avian influenza H5 by human CD4 T cells. PMID:19841175
Interspecies transmission and host restriction of avian H5N1 influenza virus. PMID:19471865
The Influenza Primer Design Resource: a new tool for translating influenza sequence data into effective diagnostics. PMID:19453490
Cross-protective potential of a novel monoclonal antibody directed against antigenic site B of the hemagglutinin of influenza A viruses. PMID:19300497
MyBASE: a database for genome polymorphism and gene function studies of Mycobacterium. PMID:19228437
Influenza sequence and epitope database. PMID:19015128
The influenza virus resource at the National Center for Biotechnology Information. PMID:17942553
MethyCancer: the database of human DNA methylation and cancer. PMID:17890243
Tags:
Tags
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deoxyribonucleic acid
metasource: Fairsharing.org
version: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
gene
metasource: Fairsharing.org
version: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
genome
metasource: Fairsharing.org
version: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
viral genome databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Tags
More detailed information about this field from each metasource.
deoxyribonucleic acid
metasource: Fairsharing.orgversion: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
gene
metasource: Fairsharing.orgversion: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
genome
metasource: Fairsharing.orgversion: FAIRsharing.org: IVDB; Influenza Virus Database; DOI: https://doi.org/10.25504/FAIRsharing.nmavtd; Last edited: Jan. 8, 2019, 1:16 p.m.; Last accessed: Jan 03 2022 7:08 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
viral genome databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
dna gene genome genomics viral genome
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