Other names: genefarm
Structural and functionnal annotation of plant gene and protein families by a network of experts.
gene and protein families plant biology
Clusters of predicted plant proteins
Quercus robur annotation database
WheatMine integrates many types of data for Triticum aestivum including gene model, markers, and scaffolds. You can run flexible queries, export results and analyse lists of data.
An integrated multi-omics database of barley gene families.
RepetDB provides repeat consensus detected and classified by TEdenovo and used by TEannot to annotate copies in genomes.
This database contains data on 105 Arabidopsis transcriptome projects (3262 hybridized samples) in public access out of a total of 172 projects (~6440 hybridized samples).
GrapeMine is dedicated to grapevine data. It provides access to many kind of data types like genomic annotation data as well as SNPs, markers and phenotyping data.
Evolutionary-oriented database of RNA recognition motif sequences.
Families of protein-coding genes from five sequenced plant species
Database and resource of protein families in Arthropod genomes.
Collection of gene and protein names, organized by species that can be used to search for a given gene/protein name, retrieve all synonyms for this entity, and query Medline with a set of user-selecte ...
Gene Ontology-based functional similarity values for proteins and protein families
Peroxibase provides access to peroxidase sequences from all kingdoms of life, and provides a series of bioinformatics tools and facilities suitable for analysing these sequences.
Thioester-active enzymes
Gene annotation portal and a resource on gene and protein function
The purpose of this web portal is to facilitate the discoverability of public data on plant biology managed by different laboratories across the world. The web portal indexes and makes findable any k ...
SulfAtlas describes the family and sub-families of structurally-related sulfatases. Sub-families are created based on phylogenetic analyses and essentially correspond to different substrate specificit ...
Database of proteins classified by their functional surfaces.
Statistical detection of pathogen-associated protein domains.
GreenPhylDB comprises 37 full genomes from the major phylum of plant evolution. Clustering of these genomes was performed to define a consistent and extensive set of homeomorphic plant families.