Gene3D

Other names: gene3d

Gene3D uses the information in CATH to predict the locations of structural domains on millions of protein sequences available in public databases. Sequence data from UniProtKB and Ensembl for domains with no experimentally determined structures are scanned against CATH HMMs to predict domain sequence boundaries and make homologous superfamily assignments.

Webpage:
http://gene3d.biochem.ucl.ac.uk

Publications:

Tags:

gene genome hidden markov model protein domain protein interaction protein structure polypeptide region structure protein folds and structural domains proteins protein structure analysis sequence analysis

More to explore:

1/20




Need help integrating and/or managing biomedical data?