Other names: coltapp
ColTapp is an automated image analysis application for efficient microbial colony growth dynamics quantification.
imaging genotype and phenotype cytometry physics
The Mammographic Image Analysis Society database of digital mammograms. Contains the original 322 images (161 pairs) at 50 micron resolution in "Portable Gray Map" (PGM) format and associated truth da ...
The Minimum Information about a Flow Cytometry Experiment (MIFlowCyt) establishes criteria for recording and reporting information about the flow cytometry experiment overview, samples, instrumentatio ...
The flow cytometry data file standard provides the specifications needed to completely describe flow cytometry data sets within the confines of the file containing the experimental data.
Integrative database and analysis platform that relates microbiome and phenotypic data. MANTA (Microbiota And pheNotype correlaTion Analysis platform) is an integrative database and analysis platform ...
FlowRepository is a database of flow cytometry experiments where you can query and download data collected and annotated according to the MIFlowCyt standard. Data are generally associated with peer re ...
A structured controlled vocabulary for describing ingredients that constitute microbial growth media used in biological research centers.
CHEMROF is an ontological framework for Chemical Entities Mixtures Reactions Ontological Framework. This OWL ontology is an automated Translation of the source LinkML schema, https://w3id.org/chemr ...
The Ontology of Physics for Biology is a reference of classical physics as applied to the dynamics of biological systems. This resource provides a reference ontology of physical properties (e.g., pres ...
An ontology developed to facilitate information curation in the area of medical devices, experimental scaffolds and biomaterials. The ontology was designed to complement existing medical vocabularies, ...
Phylogenize is a web tool that allows users to link microbial genes to environments, accounting for phylogeny. More specifically, given community composition data, phylogenize links genes in microbia ...
EMODnet-Physics map portal (www.emodnet-physics.eu/map) provides a single point of access to validated in situ datasets, products and their physical parameter metadata of European Seas and global ocea ...
An ontology for describing microbial phenotypes
an adaptive immune receptor genotype and haplotype database. The adaptive immune receptor Genotype and Haplotype database. 11-Oct-2019 *NEW* - VDJbase is described in Nucleic Acids Research. VDJbas ...
This module identifies the minimum information required to report the use of quantification techniques in a proteomics experiment, sufficient to support both the effective interpretation and assessmen ...
Microbial Conditions Ontology contains terms to describe growth conditions in microbiological experiments. The first version is based on gene regulation experiments in Escherichia coli K-12. It is bei ...
Biological Dynamics Markup Language is an open unified format for representing quantitative data of biological dynamics. BDML can describe a wide variety of spatiotemporal dynamics of biological objec ...
FuGEFlow represents a collaborative effort to develop of flow cytometry experimental workflow description based on the FuGE model. The Functional Genomics Experiment data model (FuGE) describes common ...
PICEAdatabase is a web database for Picea omics and phenotypic information.
The Database of Genotypes and Phenotypes (dbGaP) archives and distributes the results of studies that have investigated the interaction of genotype and phenotype. Such studies include genome-wide asso ...
GPCards is an integrated database of genotype-phenotype correlations in human genetic diseases.