Global analysis of cytosine and adenine DNA modifications across the tree of life.
PMID:35900202
It is time for a new type of type to facilitate naming the microbial world.
PMID:35800027
Host control and the evolution of cooperation in host microbiomes.
PMID:35732630
Machine Learning in Antibacterial Drug Design.
PMID:35592425
Opportunities and challenges of using metagenomic data to bring uncultured microbes into cultivation.
PMID:35546409
Deep learning of a bacterial and archaeal universal language of life enables transfer learning and illuminates microbial dark matter.
PMID:35545619
The genus Micromonospora as a model microorganism for bioactive natural product discovery.
PMID:35517724
Physicochemical classification of organisms.
PMID:35500111
Dynamic Microstructure Assembly Driven by Lysinibacillus sp. LF-N1 and Penicillium oxalicum DH-1 Inoculants Corresponds to Composting Performance.
PMID:35456760
Precipitous Increase of Bacterial CRISPR-Cas Abundance at Around 45°C.
PMID:35300480
Species Identification in Plant-Associated Prokaryotes and Fungi Using DNA.
PMID:35265781
Cellular assays identify barriers impeding iron-sulfur enzyme activity in a non-native prokaryotic host.
PMID:35244541
PREGO: A Literature and Data-Mining Resource to Associate Microorganisms, Biological Processes, and Environment Types.
PMID:35208748
The Evolution of Ecological Diversity in Acidobacteria.
PMID:35185839
Associations and recovery dynamics of the nasopharyngeal microbiota during influenza-like illness in the aging population.
PMID:35115596
Inferring microbiota functions from taxonomic genes: a review.
PMID:35022702
Clean room microbiome complexity impacts planetary protection bioburden.
PMID:34861887
PRODORIC: state-of-the-art database of prokaryotic gene regulation.
PMID:34850133
Next steps after 15 stimulating years of human gut microbiome research.
PMID:34818454
Isolation, Biochemical Characterisation and Identification of Thermotolerant and Cellulolytic Paenibacillus lactis and Bacillus licheniformis.
PMID:34759764
Down in the pond: Isolation and characterization of a new Serratia marcescens strain (LVF3) from the surface water near frog's lettuce (Groenlandia densa).
PMID:34748577
BacDive in 2022: the knowledge base for standardized bacterial and archaeal data.
PMID:34718743
Optimization of Fermentation Conditions for Carrageenase Production by Cellulophaga Species: A Comparative Study.
PMID:34681070
TYGS and LPSN: a database tandem for fast and reliable genome-based classification and nomenclature of prokaryotes.
PMID:34634793
Molecular basis of a bacterial-amphibian symbiosis revealed by comparative genomics, modeling, and functional testing.
PMID:34601502
Microbial occurrence in liquid nitrogen storage tanks: a challenge for cryobanking?
PMID:34559283
The Mutational Robustness of the Genetic Code and Codon Usage in Environmental Context: A Non-Extremophilic Preference?
PMID:34440517
Portable and Rapid Sequencing Device with Microbial Community-Guided Culture Strategies for Precious Field and Environmental Samples.
PMID:34427528
The Histidine Biosynthetic Genes in the Superphylum Bacteroidota-Rhodothermota-Balneolota-Chlorobiota: Insights into the Evolution of Gene Structure and Organization.
PMID:34361875
The Role of Gene Duplication in the Divergence of Enzyme Function: A Comparative Approach.
PMID:34335678
Phospholipid N-Methyltransferases Produce Various Methylated Phosphatidylethanolamine Derivatives in Thermophilic Bacteria.
PMID:34288711
Keystone Taxa Lactiplantibacillus and Lacticaseibacillus Directly Improve the Ensiling Performance and Microflora Profile in Co-Ensiling Cabbage Byproduct and Rice Straw.
PMID:34065243
Phylogenetic analysis of mutational robustness based on codon usage supports that the standard genetic code does not prefer extreme environments.
PMID:34040064
The evolution and changing ecology of the African hominid oral microbiome.
PMID:33972424
IND-enzymes: a repository for hydrolytic enzymes derived from thermophilic and psychrophilic bacterial species with potential industrial usage.
PMID:33961119
Microbial and Genetic Resources for Cobalamin (Vitamin B12) Biosynthesis: From Ecosystems to Industrial Biotechnology.
PMID:33926061
Exploring short k-mer profiles in cells and mobile elements from Archaea highlights the major influence of both the ecological niche and evolutionary history.
PMID:33726663
gapseq: informed prediction of bacterial metabolic pathways and reconstruction of accurate metabolic models.
PMID:33691770
Strain-Resolved Dynamics of the Lung Microbiome in Patients with Cystic Fibrosis.
PMID:33688005
Using neural networks to mine text and predict metabolic traits for thousands of microbes.
PMID:33651810
Implementing FAIR data management within the German Network for Bioinformatics Infrastructure (de.NBI) exemplified by selected use cases.
PMID:33589928
Potential of blockchain approach on development and security of microbial databases.
PMID:33517878
A collection of bacterial isolates from the pig intestine reveals functional and taxonomic diversity.
PMID:33319778
The high-energy transition state of the glutamate transporter homologue GltPh.
PMID:33185289
gcType: a high-quality type strain genome database for microbial phylogenetic and functional research.
PMID:33119759
Innovations to culturing the uncultured microbial majority.
PMID:33093661
Phase separation by ssDNA binding protein controlled via protein-protein and protein-DNA interactions.
PMID:33020264
Mapping the bacterial metabolic niche space.
PMID:32985497
Engineering of Thermostable β-Hydroxyacid Dehydrogenase for the Asymmetric Reduction of Imines.
PMID:32939899
A First Insight into the Structural and Functional Comparison of Environmental Microbiota in Freshwater Turtle Chinemys reevesii at Different Growth Stages under Pond and Greenhouse Cultivation.
PMID:32825672
List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ.
PMID:32701423
Complete Genome Sequences and Methylome Analyses of Cutibacterium acnes subsp. acnes Strains DSM 16379 and DSM 1897T.
PMID:32675190
A synthesis of bacterial and archaeal phenotypic trait data.
PMID:32503990
dbPSP 2.0, an updated database of protein phosphorylation sites in prokaryotes.
PMID:32472030
Growth and Behavior of North American Microbes on Phragmites australis Leaves.
PMID:32397325
A complete domain-to-species taxonomy for Bacteria and Archaea.
PMID:32341564
Zebra2: advanced and easy-to-use web-server for bioinformatic analysis of subfamily-specific and conserved positions in diverse protein superfamilies.
PMID:32313959
Ecology of Lactobacilli Present in Italian Cheeses Produced from Raw Milk.
PMID:32303552
Distribution of Bacterial α1,3-Galactosyltransferase Genes in the Human Gut Microbiome.
PMID:31998300
Factors determining microbial colonization of liquid nitrogen storage tanks used for archiving biological samples.
PMID:31781817
Drivers of the composition of active rhizosphere bacterial communities in temperate grasslands.
PMID:31659233
Current Status and Potential Applications of Underexplored Prokaryotes.
PMID:31635256
Yosshi: a web-server for disulfide engineering by bioinformatic analysis of diverse protein families.
PMID:31106356
Successful treatment of peritoneal dialysis-related peritonitis caused by Dermacoccus nishinomiyaensis.
PMID:30830670