mMGE
Names
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mMGE
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:04.247765
mmge
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:04.247765
Names
More detailed information about this field from each metasource.
mMGE
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:04.247765
mmge
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:04.247765
Names
More detailed information about this field from each metasource.
mMGE
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:04.247765
mmge
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:04.247765
Human metagenomic extrachromosomal mobile genetic elements
Description
More detailed information about this field from each metasource.
Human metagenomic extrachromosomal mobile genetic elements
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
A database for human metagenomic extrachromosomal mobile genetic elements. Extrachromosomal mobile genetic elements (eMGEs), including phages and plasmids, that can move across different microbes, play important roles in genome evolution and shaping the structure of microbial communities. However, we still know very little about eMGEs, especially their abundances, distributions and putative functions in microbiomes. Thus, a comprehensive description of eMGEs is of great utility. Here we present mMGE, a comprehensive catalog of 517 251 non-redundant eMGEs, including 92 492 plasmids and 424 759 phages, derived from diverse body sites of 66 425 human metagenomic samples. About half the eMGEs could be further grouped into 70 074 clusters using relaxed criteria (referred as to eMGE clusters below)
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:04.247765
Webpage:
http://mgedb.comp-sysbio.org/Webpage
More detailed information about this field from each metasource.
http://mgedb.comp-sysbio.org/
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
https://mgedb.comp-sysbio.org
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:04.247765
Publications:
Publications
More detailed information about this field from each metasource.
mMGE: a database for human metagenomic extrachromosomal mobile genetic elements
PMID: 33074335
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:04.247765
https://doi.org/10.1093/nar/gkaa869
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
Publications
More detailed information about this field from each metasource.
mMGE: a database for human metagenomic extrachromosomal mobile genetic elements
PMID: 33074335
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:04.247765
https://doi.org/10.1093/nar/gkaa869
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
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mMGE: a database for human metagenomic extrachromosomal mobile genetic elements
PubMed citations: 3.
3 articles citing: mMGE: a database for human metagenomic extrachromosomal mobile genetic elements
PLSDB: advancing a comprehensive database of bacterial plasmids. PMID:34850116
CeDR Atlas: a knowledgebase of cellular drug response. PMID:34634794
Antibiotic resistance: Time of synthesis in a post-genomic age. PMID:34141134 - https://doi.org/10.1093/nar/gkaa869
Tags:
Tags
More detailed information about this field from each metasource.
microbial ecology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:04.247765
metagenomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:04.247765
mobile genetic elements
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:04.247765
genotype and phenotype
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:04.247765
taxonomy
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:04.247765
Tags
More detailed information about this field from each metasource.
microbial ecology
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:04.247765
metagenomics
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:04.247765
mobile genetic elements
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:04.247765
genotype and phenotype
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:04.247765
taxonomy
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:04.247765
microbial ecology metagenomics mobile genetic elements genotype and phenotype taxonomy
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