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phagesdb

The Actinobacteriophage Database.

Description

More detailed information about this field from each metasource.

The Actinobacteriophage Database.

metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:20.048327

Webpage:

http://phagesdb.org

Webpage

More detailed information about this field from each metasource.

http://phagesdb.org

metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:20.048327

Publications:

Publications
More detailed information about this field from each metasource.

PMID:35797343
metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:20.048327

PMID:35797343

Tags:

Tags
More detailed information about this field from each metasource.

mobile genetic elements
metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:20.048327

genomics
metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:20.048327

microbiology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:20.048327

evolutionary biology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:20.048327

mapping
metasource: bio.tools
version: extracted_at: 2022-11-04T11:23:20.048327

mobile genetic elements genomics microbiology evolutionary biology mapping

More to explore:

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A CLAssification of Mobile genetic Elements

ACLAME is a database dedicated to the collection and classification of mobile genetic elements (MGEs) from various sources, comprising all known phage genomes, plasmids and transposons.

mMGE

Human metagenomic extrachromosomal mobile genetic elements

GyDB

Gypsy database of mobile genetic elements

MeGO

MeGO is dedicated to the functions of mobile genetic elements. The terms defined in MeGO are used to annotate phage and plasmid protein families in ACLAME.

resistomedb

Exploring antibiotic resistance gene abundance and distribution in TARA Oceans samples.

mobileOG-db

A Manually Curated Database of Protein Families Mediating the Life Cycle of Bacterial Mobile Genetic Elements.

ConTEdb

Comprehensive database of transposable elements in conifers.

proMGE

proMGE is a resource for the retrieval of 6 Mobile Genetic Element (MGE) categories in 76K genomes (totalling to 2.4 million prokaryotic MGEs) and classification of new ones in user provided protein s ...

CicerSpTEdb

A web-based database for high-resolution genome-wide identification of transposable elements in Cicer species.

Integrative and Conjugative Elements in Bacteria

A web-based resource for integrative and conjugative elements (ICEs) found in bacteria. It collates available data from experimental and bioinformatics analyses, and literature, about known and putati ...

zfishbook

Zfishbook is a real-time database of transposon-labeled mutants in zebrafish. This resource provides services for any size of GBT mutagenesis projects on zebrafish to encourage collaboration in the re ...

XML for evolutionary biology and comparative genomics.

PhyloXML is an XML language designed to describe phylogenetic trees (or networks) and associated data. PhyloXML provides elements for commonly used features, such as taxonomic information, gene names ...

AcrDB

anti-CRISPR operons

Tayside Microbiology Lab

NHS Tayside Microbiology laboratory samples and tests data.

Fife Microbiology Lab

NHS Fife Microbiology laboratory samples and tests data.

EcoliWiki: A Wiki-based community resource for Escherichia coli

EcoliWiki is a community-based resource for the annotation of all non-pathogenic E. coli, its phages, plasmids, and mobile genetic elements.

FARME DB

Antibiotic resistance (AR) is a major global public health threat but little is known about the relationship between AR genes present in the environment and genomic sequences derived from clinical ant ...

GapMind

Automated annotation of amino acid biosynthesis | Abstract GapMind is a web-based tool for annotating amino acid biosynthesis in bacteria and archaea ( http: papers.genomics.lbl gov gaps ). GapMind in ...

Cnidarian Evolutionary Genomics Database

CnidBase, the Cnidarian Evolutionary Genomics Database, is a tool for investigating the evolutionary, developmental and ecological factors that affect gene expression and gene function in cnidarians.