Genomic Diversity of Hospital-Acquired Infections Revealed through Prospective Whole-Genome Sequencing-Based Surveillance.
PMID:35695507
Landscape of mobile genetic elements and their antibiotic resistance cargo in prokaryotic genomes.
PMID:35323968
Population genomics of the food-borne pathogen Vibrio fluvialis reveals lineage associated pathogenicity-related genetic elements.
PMID:35212619
Bacteroidales species in the human gut are a reservoir of antibiotic resistance genes regulated by invertible promoters.
PMID:35013297
Shotgun metagenome sequencing of a Sudanese toombak snuff tobacco: genetic attributes of a high tobacco-specific nitrosamine containing smokeless tobacco product.
PMID:34862647
TnCentral: a Prokaryotic Transposable Element Database and Web Portal for Transposon Analysis.
PMID:34517763
A Novel SXT/R391 Integrative and Conjugative Element Carries Two Copies of the blaNDM-1 Gene in Proteus mirabilis.
PMID:34378988
Genome Sequences of Two Pseudomonas aeruginosa Isolates with Defects in Type III Secretion System Gene Expression from a Chronic Ankle Wound Infection.
PMID:34259549
Identical sequences found in distant genomes reveal frequent horizontal transfer across the bacterial domain.
PMID:34121661
Sequence analysis of tyrosine recombinases allows annotation of mobile genetic elements in prokaryotic genomes.
PMID:34018328
Analysis of Secreted Proteins and Potential Virulence via the ICEs-Mediated Pathway of the Foodborne Pathogen Vibrio parahaemolyticus.
PMID:33763038
A mobile genetic element increases bacterial host fitness by manipulating development.
PMID:33655883
Massive expansion of human gut bacteriophage diversity.
PMID:33606979
A Virulence Associated Siderophore Importer Reduces Antimicrobial Susceptibility of Klebsiella pneumoniae.
PMID:33584611
Predominance of III/ST19 and Ib/ST10 Lineages With High Multidrug Resistance in Fluoroquinolone-Resistant Group B Streptococci Isolates in Which a New Integrative and Conjugative Element Was Identified.
PMID:33569045
Host adaptation and microbial competition drive Ralstonia solanacearum phylotype I evolution in the Republic of Korea.
PMID:33151139
Pathogenicity Factors of Genomic Islands in Intestinal and Extraintestinal Escherichia coli.
PMID:33101219
Genomic Characteristics of Invasive Streptococcus pneumoniae Serotype 1 in New Caledonia Prior to the Introduction of PCV13.
PMID:33088176
Horizontal transmission and recombination maintain forever young bacterial symbiont genomes.
PMID:32841233
Potential evolutionary impact of integrative and conjugative elements (ICEs) and genomic islands in the Ralstonia solanacearum species complex.
PMID:32719415
Mobilization of Antibiotic Resistance: Are Current Approaches for Colocalizing Resistomes and Mobilomes Useful?
PMID:32695079
Emerging coexistence of three PMQR genes on a multiple resistance plasmid with a new surrounding genetic structure of qnrS2 in E. coli in China.
PMID:32293532
Whole Genome Sequencing Differentiates Presumptive Extended Spectrum Beta-Lactamase Producing Escherichia coli along Segments of the One Health Continuum.
PMID:32235751
Antimicrobial Resistance in Veterinary Medicine: An Overview.
PMID:32168903
Comparative genomics of multidrug-resistant Enterococcus spp. isolated from wastewater treatment plants.
PMID:31980014
Urbanization and Waterborne Pathogen Emergence in Low-Income Countries: Where and How to Conduct Surveys?
PMID:31940838
A Novel Arsenate-Resistant Determinant Associated with ICEpMERPH, a Member of the SXT/R391 Group of Mobile Genetic Elements.
PMID:31888308
Comprehensive analysis of chromosomal mobile genetic elements in the gut microbiome reveals phylum-level niche-adaptive gene pools.
PMID:31830054
Characterization of antibiotic resistance genes in the species of the rumen microbiota.
PMID:31748524
Genotypic diversity of Streptococcus suis and the S. suis-like bacterium Streptococcus ruminantium in ruminants.
PMID:31727180
Maintenance of Sympatric and Allopatric Populations in Free-Living Terrestrial Bacteria.
PMID:31662456
ICEKp2: description of an integrative and conjugative element in Klebsiella pneumoniae, co-occurring and interacting with ICEKp1.
PMID:31554924
A Yersinia ruckeri TIR Domain-Containing Protein (STIR-2) Mediates Immune Evasion by Targeting the MyD88 Adaptor.
PMID:31500298
First Report of Integrative Conjugative Elements in Riemerella anatipestifer Isolates From Ducks in China.
PMID:31069241
Non-contiguous finished genome sequencing and description of Enterococcus timonensis sp. nov. isolated from human sputum.
PMID:31011427
Cumulative acquisition of pathogenicity islands has shaped virulence potential and contributed to the emergence of LEE-negative Shiga toxin-producing Escherichia coli strains.
PMID:30924410
Lower Respiratory Tract Microbiome and Resistome of Bovine Respiratory Disease Mortalities.
PMID:30918994
Mobile antibiotic resistome in wastewater treatment plants revealed by Nanopore metagenomic sequencing.
PMID:30898140
The antibiotic resistance and pathogenicity of a multidrug-resistant Elizabethkingia anophelis isolate.
PMID:30891912
Nasal Resistome Development in Infants With Cystic Fibrosis in the First Year of Life.
PMID:30863369
Draft genome sequence of a uropathogenic Escherichia coli isolate (ST38 O1:H15) from Pakistan, an emerging multidrug-resistant sequence type with a high virulence profile.
PMID:30510766
ICEberg 2.0: an updated database of bacterial integrative and conjugative elements.
PMID:30407568
Antibiotics, Resistome and Resistance Mechanisms: A Bacterial Perspective.
PMID:30298054
Pull in and Push Out: Mechanisms of Horizontal Gene Transfer in Bacteria.
PMID:30237794
Role of plasmid plasticity and mobile genetic elements in the entomopathogen Bacillus thuringiensis serovar israelensis.
PMID:30203090
Mobile Genetic Elements Associated with Antimicrobial Resistance.
PMID:30068738
Integrative and Conjugative Elements (ICEs) in Pasteurellaceae Species and Their Detection by Multiplex PCR.
PMID:29997583
Characterization of a Novel SXT/R391 Integrative and Conjugative Element Carrying cfr, blaCTX-M-65, fosA3, and aac(6')-Ib-cr in Proteus mirabilis.
PMID:29967018
Microbial genomic island discovery, visualization and analysis.
PMID:29868902
Distribution and Genetic Characteristics of SXT/R391 Integrative Conjugative Elements in Shewanella spp. From China.
PMID:29867831
Comparative genomic analysis of a naturally competent Elizabethkingia anophelis isolated from an eye infection.
PMID:29855598
A Novel Glaesserella sp. Isolated from Pigs with Severe Respiratory Infections Has a Mosaic Genome with Virulence Factors Putatively Acquired by Horizontal Transfer.
PMID:29572210
Transposase-DNA Complex Structures Reveal Mechanisms for Conjugative Transposition of Antibiotic Resistance.
PMID:29551265
Whole-genome analysis reveals the evolution and transmission of an MDR DH/NAP11/106 Clostridium difficile clone in a paediatric hospital.
PMID:29342270
Comparative genomic analysis of Brevibacterium strains: insights into key genetic determinants involved in adaptation to the cheese habitat.
PMID:29216827
Novel large-scale chromosomal transfer in Bacteroides fragilis contributes to its pan-genome and rapid environmental adaptation.
PMID:29208130
ICESag37, a Novel Integrative and Conjugative Element Carrying Antimicrobial Resistance Genes and Potential Virulence Factors in Streptococcus agalactiae.
PMID:29051752
Characterization of the Actinobacillus pleuropneumoniae SXT-related integrative and conjugative element ICEApl2 and analysis of the encoded FloR protein: hydrophobic residues in transmembrane domains contribute dynamically to florfenicol and chloramphenicol efflux.
PMID:29029160
Genome characterization of two bile-isolated Vibrio fluvialis strains: an insight into pathogenicity and bile salt adaption.
PMID:28928424
In silico analysis of protein toxin and bacteriocins from Lactobacillus paracasei SD1 genome and available online databases.
PMID:28837656
Analysis and comparative genomics of R997, the first SXT/R391 integrative and conjugative element (ICE) of the Indian Sub-Continent.
PMID:28819148
Serotype-specific role of antigen I/II in the initial steps of the pathogenesis of the infection caused by Streptococcus suis.
PMID:28705175
Complete Genome Sequence of the Streptococcus gallolyticus subsp. gallolyticus Strain DSM 16831.
PMID:28428288
A Locus Encoding Variable Defense Systems against Invading DNA Identified in Streptococcus suis.
PMID:28379509
The hidden life of integrative and conjugative elements.
PMID:28369623
Comparative genomics of Enterococcus spp. isolated from bovine feces.
PMID:28270110
Mixed transmission modes and dynamic genome evolution in an obligate animal-bacterial symbiosis.
PMID:28234348
A Clostridium difficile Lineage Endemic to Costa Rican Hospitals Is Multidrug Resistant by Acquisition of Chromosomal Mutations and Novel Mobile Genetic Elements.
PMID:28137804
Networking in microbes: conjugative elements and plasmids in the genus Alteromonas.
PMID:28056800
Characterization of Three Novel SXT/R391 Integrating Conjugative Elements ICEMfuInd1a and ICEMfuInd1b, and ICEMprChn1 Identified in the Genomes of Marinomonas fungiae JCM 18476T and Marinomonas profundimaris Strain D104.
PMID:27933056
SXT/R391 integrative and conjugative elements in Proteus species reveal abundant genetic diversity and multidrug resistance.
PMID:27892525
Evolution and Diversity of the Antimicrobial Resistance Associated Mobilome in Streptococcus suis: A Probable Mobile Genetic Elements Reservoir for Other Streptococci.
PMID:27774436
Comparative genomics of Clostridium bolteae and Clostridium clostridioforme reveals species-specific genomic properties and numerous putative antibiotic resistance determinants.
PMID:27769168
Assembly and transfer of tripartite integrative and conjugative genetic elements.
PMID:27733511
Autonomous Replication of the Conjugative Transposon Tn916.
PMID:27698087
Genomic Analysis Reveals Multi-Drug Resistance Clusters in Group B Streptococcus CC17 Hypervirulent Isolates Causing Neonatal Invasive Disease in Southern Mainland China.
PMID:27574519
SXT/R391 Integrative and Conjugative Elements (ICEs) Encode a Novel 'Trap-Door' Strategy for Mobile Element Escape.
PMID:27303400
Computational methods for predicting genomic islands in microbial genomes.
PMID:27293536
MOCAT2: a metagenomic assembly, annotation and profiling framework.
PMID:27153620
Comparative genomic analysis of six new-found integrative conjugative elements (ICEs) in Vibrio alginolyticus.
PMID:27145747
Genome sequencing and analysis of the first complete genome of Lactobacillus kunkeei strain MP2, an Apis mellifera gut isolate.
PMID:27114887
ICESpy009, a Conjugative Genetic Element Carrying mef(E) in Streptococcus pyogenes.
PMID:27067338
Comparative Genomics of Carriage and Disease Isolates of Streptococcus pneumoniae Serotype 22F Reveals Lineage-Specific Divergence and Niche Adaptation.
PMID:27016484
Zisland Explorer: detect genomic islands by combining homogeneity and heterogeneity properties.
PMID:26992782
Comparative Genomic Analysis of the ICESa2603 Family ICEs and Spread of erm(B)- and tet(O)-Carrying Transferable 89K-Subtype ICEs in Swine and Bovine Isolates in China.
PMID:26870017
Genomic analysis of the nitrate-respiring Sphingopyxis granuli (formerly Sphingomonas macrogoltabida) strain TFA.
PMID:26847793
Characterization of SXT/R391 Integrative and Conjugative Elements in Proteus mirabilis Isolates from Food-Producing Animals in China.
PMID:26824957
New Insights into the Classification and Integration Specificity of Streptococcus Integrative Conjugative Elements through Extensive Genome Exploration.
PMID:26779141
Human microbiomes and their roles in dysbiosis, common diseases, and novel therapeutic approaches.
PMID:26500616
Integrative and Conjugative Elements (ICEs): What They Do and How They Work.
PMID:26473380
Identification of a Single Strand Origin of Replication in the Integrative and Conjugative Element ICEBs1 of Bacillus subtilis.
PMID:26440206
The extended regulatory networks of SXT/R391 integrative and conjugative elements and IncA/C conjugative plasmids.
PMID:26347724
Integrative conjugative elements of the ICEPan family play a potential role in Pantoea ananatis ecological diversification and antibiosis.
PMID:26106378
Databases for Microbiologists.
PMID:26013493
Complete genome sequence and analysis of Lactobacillus hokkaidonensis LOOC260(T), a psychrotrophic lactic acid bacterium isolated from silage.
PMID:25879859
Complete genome sequence of Ornithobacterium rhinotracheale strain ORT-UMN 88.
PMID:25780507
The use of genome wide association methods to investigate pathogenicity, population structure and serovar in Haemophilus parasuis.
PMID:25539682
Functional validation of putative toxin-antitoxin genes from the Gram-positive pathogen Streptococcus pneumoniae: phd-doc is the fourth bona-fide operon.
PMID:25538695
Genomic insights into intrinsic and acquired drug resistance mechanisms in Achromobacter xylosoxidans.
PMID:25487802
Global phylogenomic analysis of nonencapsulated Streptococcus pneumoniae reveals a deep-branching classic lineage that is distinct from multiple sporadic lineages.
PMID:25480686
The genome of the intracellular bacterium of the coastal bivalve, Solemya velum: a blueprint for thriving in and out of symbiosis.
PMID:25342549
The TetR-type MfsR protein of the integrative and conjugative element (ICE) ICEclc controls both a putative efflux system and initiation of ICE transfer.
PMID:25182498
Characterization of the core and accessory genomes of Pseudomonas aeruginosa using bioinformatic tools Spine and AGEnt.
PMID:25168460
Identification of Horizontally-transferred Genomic Islands and Genome Segmentation Points by Using the GC Profile Method.
PMID:24822029
Bacterial insertion sequences: their genomic impact and diversity.
PMID:24499397
Pathogens of bovine respiratory disease in North American feedlots conferring multidrug resistance via integrative conjugative elements.
PMID:24478472
CRISPR-Cas systems target a diverse collection of invasive mobile genetic elements in human microbiomes.
PMID:23628424
A conserved helicase processivity factor is needed for conjugation and replication of an integrative and conjugative element.
PMID:23326247
SecReT4: a web-based bacterial type IV secretion system resource.
PMID:23193298
Characterization of a Streptococcus suis tet(O/W/32/O)-carrying element transferable to major streptococcal pathogens.
PMID:22710115
The Bacillus subtilis conjugative transposon ICEBs1 mobilizes plasmids lacking dedicated mobilization functions.
PMID:22505685
The phn Island: A New Genomic Island Encoding Catabolism of Polynuclear Aromatic Hydrocarbons.
PMID:22493593
Complete genome sequence of Klebsiella pneumoniae subsp. pneumoniae HS11286, a multidrug-resistant strain isolated from human sputum.
PMID:22408243