The Triticeae Toolbox
Names
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The Triticeae Toolbox
metasource: Fairsharing.org
version: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
T3
metasource: Fairsharing.org
version: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
Triticeae Toolbox
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
Names
More detailed information about this field from each metasource.
The Triticeae Toolbox
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
T3
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
Triticeae Toolbox
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
Other names: T3, Triticeae Toolbox
Names
More detailed information about this field from each metasource.
The Triticeae Toolbox
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
T3
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
Triticeae Toolbox
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
The Triticeae Toolbox (T3) is a repository for public wheat data generated by the Wheat Coordinated Agricultural Project (Wheat CAP). Funding is provided by the National Institute for Food and Agriculture (NIFA) and the United States Department of Agriculture (USDA). The current project is funded through NIFA's International Wheat Yield Partnership (IWYP) and part of the Agriculture and Food Research Initiative (AFRI).
Description
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The Triticeae Toolbox (T3) is a repository for public wheat data generated by the Wheat Coordinated Agricultural Project (Wheat CAP). Funding is provided by the National Institute for Food and Agriculture (NIFA) and the United States Department of Agriculture (USDA). The current project is funded through NIFA's International Wheat Yield Partnership (IWYP) and part of the Agriculture and Food Research Initiative (AFRI).
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
A database for plant breeders and researchers to combine, visualize, and interrogate the wealth of phenotype and genotype data generated by the Triticeae Coordinated Agricultural Project (TCAP).
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
Webpage:
https://triticeaetoolbox.org/Webpage
More detailed information about this field from each metasource.
https://triticeaetoolbox.org/
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
https://triticeaetoolbox.org
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
Licence:
Name: 2009 Toronto Statement on Benefits and Best Practices of Rapid Pre-Publication Data ReleaseLicence name
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2009 Toronto Statement on Benefits and Best Practices of Rapid Pre-Publication Data Release
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Copyrights
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
Licence URL
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https://dx.doi.org/10.1038%2F461168a
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
https://triticeaetoolbox.org/wheat/docs/LICENSE
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
Publications:
Publications
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The Triticeae Toolbox: Combining Phenotype and Genotype Data to Advance Small-Grains Breeding
PMID: 27898834
metasource: Fairsharing.org
version: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Publications
More detailed information about this field from each metasource.
The Triticeae Toolbox: Combining Phenotype and Genotype Data to Advance Small-Grains Breeding
PMID: 27898834
metasource: Fairsharing.org
version: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
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The Triticeae Toolbox: Combining Phenotype and Genotype Data to Advance Small-Grains Breeding
PubMed citations: 37.
37 articles citing: The Triticeae Toolbox: Combining Phenotype and Genotype Data to Advance Small-Grains Breeding
Genome-wide association mapping identifies common bunt (Tilletia caries) resistance loci in bread wheat (Triticum aestivum) accessions of the USDA National Small Grains Collection. PMID:35896689
Genome-Wide Association Mapping Identifies Key Genomic Regions for Grain Zinc and Iron Biofortification in Bread Wheat. PMID:35845653
Reliable DNA Markers for a Previously Unidentified, Yet Broadly Deployed Hessian Fly Resistance Gene on Chromosome 6B in Pacific Northwest Spring Wheat Varieties. PMID:35769296
GrainGenes: a data-rich repository for small grains genetics and genomics. PMID:35616118
Genome analysis in Avena sativa reveals hidden breeding barriers and opportunities for oat improvement. PMID:35585176
Genome-Wide Association Mapping Indicates Quantitative Genetic Control of Spot Blotch Resistance in Bread Wheat and the Favorable Effects of Some Spot Blotch Loci on Grain Yield. PMID:35310648
Identification of QTLs for Grain Protein Content in Russian Spring Wheat Varieties. PMID:35161418
Mutations in a barley cytochrome P450 gene enhances pathogen induced programmed cell death and cutin layer instability. PMID:34914713
Genome-Wide Association Mapping for Yield and Related Traits Under Drought Stressed and Non-stressed Environments in Wheat. PMID:34239537
Identification of Main-Effect and Environmental Interaction QTL and Their Candidate Genes for Drought Tolerance in a Wheat RIL Population Between Two Elite Spring Cultivars. PMID:34220939
Improving Genomic Prediction for Seed Quality Traits in Oat (Avena sativa L.) Using Trait-Specific Relationship Matrices. PMID:33868378
Crop breeding for a changing climate: integrating phenomics and genomics with bioinformatics. PMID:33852055
Using precision phenotyping to inform de novo domestication. PMID:33848336
KnetMiner: a comprehensive approach for supporting evidence-based gene discovery and complex trait analysis across species. PMID:33750020
Mapping and Validation of Stem Rust Resistance Loci in Spring Wheat Line CI 14275. PMID:33510752
Applying FAIR Principles to Plant Phenotypic Data Management in GnpIS. PMID:33313522
Global Role of Crop Genomics in the Face of Climate Change. PMID:32765541
Genetic Analysis Using a Multi-Parent Wheat Population Identifies Novel Sources of Septoria Tritici Blotch Resistance. PMID:32759792
Genome-Wide Association Studies in Diverse Spring Wheat Panel for Stripe, Stem, and Leaf Rust Resistance. PMID:32582265
Genetic Characterization of a Wheat Association Mapping Panel Relevant to Brazilian Breeding Using a High-Density Single Nucleotide Polymorphism Array. PMID:32350030
Genome-Wide Discovery of G-Quadruplexes in Wheat: Distribution and Putative Functional Roles. PMID:32295768
A roadmap for gene functional characterisation in crops with large genomes: Lessons from polyploid wheat. PMID:32208137
Multi-trait Improvement by Predicting Genetic Correlations in Breeding Crosses. PMID:31358561
GrainGenes: centralized small grain resources and digital platform for geneticists and breeders. PMID:31210272
From markers to genome-based breeding in wheat. PMID:30673804
DAWN: a resource for yielding insights into the diversity among wheat genomes. PMID:30558550
Applying the latest advances in genomics and phenomics for trait discovery in polyploid wheat. PMID:30407665
Targeted recombination to increase genetic gain in self-pollinated species. PMID:30377704
Bottlenecks for genome-edited crops on the road from lab to farm. PMID:30367679
AgBioData consortium recommendations for sustainable genomics and genetics databases for agriculture. PMID:30239679
QTL Mapping of Fusarium Head Blight and Correlated Agromorphological Traits in an Elite Barley Cultivar Rasmusson. PMID:30233612
Inferring defense-related gene families in Arabidopsis and wheat. PMID:29258426
Assessing and Exploiting Functional Diversity in Germplasm Pools to Enhance Abiotic Stress Adaptation and Yield in Cereals and Food Legumes. PMID:28900432
Prediction and analysis of three gene families related to leaf rust (Puccinia triticina) resistance in wheat (Triticum aestivum L.). PMID:28633642
Knowledge Discovery in Biological Databases for Revealing Candidate Genes Linked to Complex Phenotypes. PMID:28609292
Evaluating Methods of Updating Training Data in Long-Term Genomewide Selection. PMID:28315831
Developing integrated crop knowledge networks to advance candidate gene discovery. PMID:28018846
Tags:
Tags
More detailed information about this field from each metasource.
gene report
metasource: Fairsharing.org
version: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
genotype
metasource: Fairsharing.org
version: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
phenotype
metasource: Fairsharing.org
version: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
protein
metasource: Fairsharing.org
version: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
single nucleotide polymorphism
metasource: Fairsharing.org
version: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
dna marker
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
t3/barley
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
t3/oat
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
t3/wheat
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
the hordeum toolbox - tht
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
breeders datafarm
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
causal polymorphisms
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
genome
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
Tags
More detailed information about this field from each metasource.
gene report
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
genotype
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
phenotype
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
metasource: re3data.org
version: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
protein
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
single nucleotide polymorphism
metasource: Fairsharing.orgversion: FAIRsharing.org: T3; The Triticeae Toolbox; DOI: https://doi.org/10.25504/FAIRsharing.55ev2y; Last edited: Jan. 7, 2020, 4:39 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
dna marker
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
t3/barley
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
t3/oat
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
t3/wheat
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
the hordeum toolbox - tht
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
breeders datafarm
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
causal polymorphisms
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
genome
metasource: re3data.orgversion: re3data.org: Triticeae Toolbox; editing status 2021-10-06; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3QN2M last accessed: 2022-11-04
gene report genotype phenotype protein single nucleotide polymorphism dna marker t3/barley t3/oat t3/wheat the hordeum toolbox - tht breeders datafarm causal polymorphisms genome
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