ProteomeScout

Description

More detailed information about this field from each metasource.

Proteomics of post-translational modifications

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

dbPTM

dbPTM is a databases which accumulates the biological information related to protein post-translational modification (PTM), such as the catalytic sites, structural information, solvent accessibility o ...

Human Histone Database

HIstome (Human histone database) is a freely available, specialist, electronic database dedicated to display information about human histone variants, sites of their post-translational modifications a ...

proteomics BAM

The proteomics BAM (proBAM) file format is designed for storing and analyzing peptide spectrum matches (PSMs) within the context of the genome. proBAM is built upon the SAM format and its compressed b ...

qPTMplants

An integrative database of quantitative post-translational modifications in plants.

PhosphoSite Plus

PhosphoSite Plus provides extensive information on mammalian post-translational modifications (PTMs). The resource supersedes PhosphoSite a mammalian protein database that provides information about i ...

Open Proteomics Database

Mass-spectrometry-based proteomics data for human, yeast, E.coli and Mycobacterium

PTMcode

PTMCode is a resource of known and predicted functional associations between protein post-translational modifications (PTMs) within and between interacting proteins.

PRoteomics IDEntifications database

The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository that provides protein and peptide identifications together with supporting evidence.

RESID Database of Protein Modifications

The RESID Database of Protein Modifications is a comprehensive collection of annotations and structures for protein modifications including amino-terminal, carboxyl-terminal and peptide chain cross-li ...

ProteomeXchange

The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteomics data to the main existing proteomics repositories, and to encourage the data exchange between th ...

The Encyclopedia of Proteome Dynamics

The EPD has been created and is maintained by the Lamond group in the University of Dundee. It combines a polyglot persistent database and web-application that provides open access to integrated prote ...

OmniPath

A collection of literature-curated human and rodent signalling pathways. Aggregates over 50 sources in total, ~ 32 for PPIs including SigNOR and BioGRID.

Colorectal Cancer Atlas

Colorectral Cancer Atlas is an web-based resource which integrates genomic and proteomic pertaining to colorectal cancer cell lines and tissues. Data catalogued includes, quantitative and non-quantita ...

FAT-PTM

A Functional Analysis Tools for Post-translational Modifications (FAT-PTM) database, which supports data from publicly available proteomic analyses encompassing eight different types of PTMs and over ...

SysPIMP

Platform for Identifying Mutated Proteins

AntigenDB

Sequence, structure, and other data on pathogen antigens

Human Protein Reference Database

The Human Protein Reference Database represents a centralized platform to visually depict and integrate information pertaining to domain architecture, post-translational modifications, interaction net ...

MobiDB

MobiDB is a database of intrinsically disordered regions (IDRs) and related features from various sources and prediction tools. Different levels of reliability and different features are reported as d ...

Proteomics Standards Initiative Extended Fasta Format

The PSI Extended Fasta Format (PEFF) is a unified format for protein and nucleotide sequence databases to be used by sequence search engines and other associated tools (spectra library search tools, s ...

Biological General Repository for Interaction Datasets

The Biological General Repository for Interaction Datasets (BioGRID) is a curated biological database of protein-protein interactions, genetic interactions, chemical interactions, and post-translation ...

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Publications:

Publications
More detailed information about this field from each metasource.

http://dx.doi.org/10.1093/nar/gku1154
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Tags:

Tags
More detailed information about this field from each metasource.

proteomics resources
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

More to explore:

1/20

dbPTM

Human Histone Database

proteomics BAM

qPTMplants

PhosphoSite Plus

Open Proteomics Database

PTMcode

PRoteomics IDEntifications database

RESID Database of Protein Modifications

ProteomeXchange

The Encyclopedia of Proteome Dynamics

OmniPath

Colorectal Cancer Atlas

FAT-PTM

SysPIMP

AntigenDB

Human Protein Reference Database

MobiDB

Proteomics Standards Initiative Extended Fasta Format

Biological General Repository for Interaction Datasets

ProteomeScout

Webpage:

Publications: Publications More detailed information about this field from each metasource. × http://dx.doi.org/10.1093/nar/gku1154 metasource: Nucleic Acid Research database catalogue version: extracted_at: 2022-11-04T11:16:25.468657 Close

Tags: Tags More detailed information about this field from each metasource. × proteomics resources metasource: Nucleic Acid Research database catalogue version: extracted_at: 2022-11-04T11:16:25.468657 Close

More to explore:

1/20

dbPTM

Human Histone Database

proteomics BAM

qPTMplants

PhosphoSite Plus

Open Proteomics Database

PTMcode

PRoteomics IDEntifications database

RESID Database of Protein Modifications

ProteomeXchange

The Encyclopedia of Proteome Dynamics

OmniPath

Colorectal Cancer Atlas

FAT-PTM

SysPIMP

AntigenDB

Human Protein Reference Database

MobiDB

Proteomics Standards Initiative Extended Fasta Format

Biological General Repository for Interaction Datasets

Publications:

Publications
More detailed information about this field from each metasource.

http://dx.doi.org/10.1093/nar/gku1154
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Tags:

Tags
More detailed information about this field from each metasource.

proteomics resources
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657