Nottingham Arabidopsis Stock Centre Seeds Database
Names
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Nottingham Arabidopsis Stock Centre Seeds Database
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
NASC
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Nottingham Arabidopsis Stock Centre
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
The European Arabidopsis Stock Centre
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Names
More detailed information about this field from each metasource.
Nottingham Arabidopsis Stock Centre Seeds Database
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
NASC
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Nottingham Arabidopsis Stock Centre
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
The European Arabidopsis Stock Centre
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Other names: NASC, Nottingham Arabidopsis Stock Centre, The European Arabidopsis Stock Centre
Names
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Nottingham Arabidopsis Stock Centre Seeds Database
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
NASC
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Nottingham Arabidopsis Stock Centre
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
The European Arabidopsis Stock Centre
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
The Nottingham Arabidopsis Stock Centre (NASC) provides seed and information resources to the International Arabidopsis Genome Programme and the wider research community.
Description
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The Nottingham Arabidopsis Stock Centre (NASC) provides seed and information resources to the International Arabidopsis Genome Programme and the wider research community.
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
The Nottingham Arabidopsis Stock Centre (NASC) provides seed and information resources to Europe researchers.
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Webpage:
http://arabidopsis.infoWebpage
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http://arabidopsis.info
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://arabidopsis.info/
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
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Name: Public DomainLicence name
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Public Domain
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
URL: https://www.nottingham.ac.uk/biosciences/subject-areas/plantcrop/documents/newsletters/june-newsletter-2014.pdf
Licence URL
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https://www.nottingham.ac.uk/biosciences/subject-areas/plantcrop/documents/newsletters/june-newsletter-2014.pdf
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Publications:
Publications
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NASCArrays: a repository for microarray data generated by NASC's transcriptomics service
PMID: 14681484
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Publications
More detailed information about this field from each metasource.
NASCArrays: a repository for microarray data generated by NASC's transcriptomics service
PMID: 14681484
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
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NASCArrays: a repository for microarray data generated by NASC's transcriptomics service
PubMed citations: 184.
184 articles citing: NASCArrays: a repository for microarray data generated by NASC's transcriptomics service
Prediction and expression analysis of deleterious nonsynonymous SNPs of Arabidopsis ACD11 gene by combining computational algorithms and molecular docking approach. PMID:35709304
Gene coexpression analysis in Arabidopsis thaliana based on public microarray data. PMID:35243384
Arabidopsis Coexpression Tool: a tool for gene coexpression analysis in Arabidopsis thaliana. PMID:34381973
Guard cells control hypocotyl elongation through HXK1, HY5, and PIF4. PMID:34155329
Identification of cis-regulatory motifs in first introns and the prediction of intron-mediated enhancement of gene expression in Arabidopsis thaliana. PMID:34039279
Arabidopsis UGT76B1 glycosylates N-hydroxy-pipecolic acid and inactivates systemic acquired resistance in tomato. PMID:33955491
Functional Implications of Active N6-Methyladenosine in Plants. PMID:32411708
Convergent Loss of an EDS1/PAD4 Signaling Pathway in Several Plant Lineages Reveals Coevolved Components of Plant Immunity and Drought Response. PMID:32409319
Identification of gene expression logical invariants in Arabidopsis. PMID:31245766
A genome-wide scan for correlated mutations detects macromolecular and chromatin interactions in Arabidopsis thaliana. PMID:29986106
Delineation of condition specific Cis- and Trans-acting elements in plant promoters under various Endo- and exogenous stimuli. PMID:29764390
Circadian clock components control daily growth activities by modulating cytokinin levels and cell division-associated gene expression in Populus trees. PMID:29520862
STRESS INDUCED FACTOR 2, a Leucine-Rich Repeat Kinase Regulates Basal Plant Pathogen Defense. PMID:29463771
Transcriptome dynamic of Arabidopsis roots infected with Phytophthora parasitica identifies VQ29, a gene induced during the penetration and involved in the restriction of infection. PMID:29281727
Metabolic Pathway Assignment of Plant Genes based on Phylogenetic Profiling-A Feasibility Study. PMID:29163570
Evolutionary history of callose synthases in terrestrial plants with emphasis on proteins involved in male gametophyte development. PMID:29131847
Utility and Limitations of Using Gene Expression Data to Identify Functional Associations. PMID:27935950
Tandem affinity purification of AtTERT reveals putative interaction partners of plant telomerase in vivo. PMID:27853871
The Plant Cell Wall: A Complex and Dynamic Structure As Revealed by the Responses of Genes under Stress Conditions. PMID:27559336
Recent Advances in Understanding the Molecular Mechanisms Regulating the Root System Response to Phosphate Deficiency in Arabidopsis. PMID:27499680
Keeping Control: The Role of Senescence and Development in Plant Pathogenesis and Defense. PMID:27135337
Genome-Wide Analysis of PAPS1-Dependent Polyadenylation Identifies Novel Roles for Functionally Specialized Poly(A) Polymerases in Arabidopsis thaliana. PMID:26305463
A P-Norm Robust Feature Extraction Method for Identifying Differentially Expressed Genes. PMID:26201006
RNA N6-methyladenosine methylation in post-transcriptional gene expression regulation. PMID:26159994
Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. PMID:26103993
Identification of Arabidopsis candidate genes in response to biotic and abiotic stresses using comparative microarrays. PMID:25933420
EXPath: a database of comparative expression analysis inferring metabolic pathways for plants. PMID:25708775
POEAS: Automated Plant Phenomic Analysis Using Plant Ontology. PMID:25574136
Transcriptome analysis reveals genes commonly induced by Botrytis cinerea infection, cold, drought and oxidative stresses in Arabidopsis. PMID:25422934
Wounding in the plant tissue: the defense of a dangerous passage. PMID:25278948
Characterization of putative cis-regulatory elements in genes preferentially expressed in Arabidopsis male meiocytes. PMID:25250331
Interactions Among Plant Transcription Factors Regulating Expression of Stress-responsive Genes. PMID:25249757
A class-information-based penalized matrix decomposition for identifying plants core genes responding to abiotic stresses. PMID:25180509
Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes. PMID:24773781
'In silico expression analysis', a novel PathoPlant web tool to identify abiotic and biotic stress conditions associated with specific cis-regulatory sequences. PMID:24727366
Plant systems biology: insights, advances and challenges. PMID:24671625
Fast retrograde signaling in response to high light involves metabolite export, MITOGEN-ACTIVATED PROTEIN KINASE6, and AP2/ERF transcription factors in Arabidopsis. PMID:24668746
HMA4 expression in tobacco reduces Cd accumulation due to the induction of the apoplastic barrier. PMID:24420575
Characterization and identification of cis-regulatory elements in Arabidopsis based on single-nucleotide polymorphism information. PMID:24204023
Specificity in ROS signaling and transcript signatures. PMID:24180661
Robust PCA based method for discovering differentially expressed genes. PMID:23815087
Identification of genes involved in the response of Arabidopsis to simultaneous biotic and abiotic stresses. PMID:23800991
Mapping gene activity of Arabidopsis root hairs. PMID:23800126
PLANEX: the plant co-expression database. PMID:23688397
Transcriptome Profiling Following Neuronal and Glial Expression of ALS-Linked SOD1 in Drosophila. PMID:23550139
Reverse engineering: a key component of systems biology to unravel global abiotic stress cross-talk. PMID:23293646
PRIMe Update: innovative content for plant metabolomics and integration of gene expression and metabolite accumulation. PMID:23292601
Recent developments in plant zinc homeostasis and the path toward improved biofortification and phytoremediation programs. PMID:23221755
De novo production of the flavonoid naringenin in engineered Saccharomyces cerevisiae. PMID:23216753
The MORPH algorithm: ranking candidate genes for membership in Arabidopsis and tomato pathways. PMID:23204403
Visual analysis of transcriptome data in the context of anatomical structures and biological networks. PMID:23162564
G protein-coupled receptor-type G proteins are required for light-dependent seedling growth and fertility in Arabidopsis. PMID:23001037
The salicylic acid dependent and independent effects of NMD in plants. PMID:22990450
Metabolic module mining based on Independent Component Analysis in Arabidopsis thaliana. PMID:22960738
Computational selection of transcriptomics experiments improves Guilt-by-Association analyses. PMID:22879875
Unique drought resistance functions of the highly ABA-induced clade A protein phosphatase 2Cs. PMID:22829320
Characteristic gene selection via weighting principal components by singular values. PMID:22808018
Frequency-based time-series gene expression recomposition using PRIISM. PMID:22703599
Identification of metagenes and their interactions through large-scale analysis of Arabidopsis gene expression data. PMID:22694750
Tackling drought stress: receptor-like kinases present new approaches. PMID:22693282
Gene regulation by cytokinin in Arabidopsis. PMID:22639635
ArraySearch: A Web-Based Genomic Search Engine. PMID:22474412
A role for nonsense-mediated mRNA decay in plants: pathogen responses are induced in Arabidopsis thaliana NMD mutants. PMID:22384098
Salicylic Acid biosynthesis and metabolism. PMID:22303280
Identification of putative cancer genes through data integration and comparative genomics between plants and humans. PMID:22218400
Gene expression changes in phosphorus deficient potato (Solanum tuberosum L.) leaves and the potential for diagnostic gene expression markers. PMID:21935429
Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation. PMID:21746925
A transcriptional analysis of carotenoid, chlorophyll and plastidial isoprenoid biosynthesis genes during development and osmotic stress responses in Arabidopsis thaliana. PMID:21595952
Evolutionary history of the GH3 family of acyl adenylases in rosids. PMID:21594748
Coordinated gene networks regulating Arabidopsis plant metabolism in response to various stresses and nutritional cues. PMID:21487096
REVEILLE8 and PSEUDO-REPONSE REGULATOR5 form a negative feedback loop within the Arabidopsis circadian clock. PMID:21483796
The predicted Arabidopsis interactome resource and network topology-based systems biology analyses. PMID:21441435
Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift. PMID:21297981
Investigating the effect of paralogs on microarray gene-set analysis. PMID:21261946
ATTED-II updates: condition-specific gene coexpression to extend coexpression analyses and applications to a broad range of flowering plants. PMID:21217125
Predicting genome-wide redundancy using machine learning. PMID:21087504
Gene networks for nitrogen sensing, signaling, and response in Arabidopsis thaliana. PMID:20890965
GreenPhylDB v2.0: comparative and functional genomics in plants. PMID:20864446
A Brassica exon array for whole-transcript gene expression profiling. PMID:20862292
LIL3, a light-harvesting-like protein, plays an essential role in chlorophyll and tocopherol biosynthesis. PMID:20823244
Gene Expression Browser: large-scale and cross-experiment microarray data integration, management, search & visualization. PMID:20727159
Coexpression landscape in ATTED-II: usage of gene list and gene network for various types of pathways. PMID:20383554
Toward genome-wide metabolotyping and elucidation of metabolic system: metabolic profiling of large-scale bioresources. PMID:20369372
TobEA: an atlas of tobacco gene expression from seed to senescence. PMID:20187945
Transcriptional profiling of the Arabidopsis iron deficiency response reveals conserved transition metal homeostasis networks. PMID:20181752
Documentation system for plant transformation service and research. PMID:20181025
Coexpression analysis of tomato genes and experimental verification of coordinated expression of genes found in a functionally enriched coexpression module. PMID:20130013
The Arabidopsis wall associated kinase-like 10 gene encodes a functional guanylyl cyclase and is co-expressed with pathogen defense related genes. PMID:20126659
In silico evaluation of predicted regulatory interactions in Arabidopsis thaliana. PMID:20025756
AtMetExpress development: a phytochemical atlas of Arabidopsis development. PMID:20023150
VirtualPlant: a software platform to support systems biology research. PMID:20007449
Plant MetGenMAP: an integrative analysis system for plant systems biology. PMID:19819981
Unsupervised meta-analysis on diverse gene expression datasets allows insight into gene function and regulation. PMID:19812781
Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression. PMID:19767600
From gene expression to gene regulatory networks in Arabidopsis thaliana. PMID:19728870
Lessons from investigation of regulation of APS reductase by salt stress. PMID:19704471
Multi-dimensional correlations for gene coexpression and application to the large-scale data of Arabidopsis. PMID:19620096
Predicting protein-protein interactions in Arabidopsis thaliana through integration of orthology, gene ontology and co-expression. PMID:19563678
HORMONOMETER: a tool for discerning transcript signatures of hormone action in the Arabidopsis transcriptome. PMID:19535475
Internet Resources for Gene Expression Analysis in Arabidopsis thaliana. PMID:19506727
A system biology approach highlights a hormonal enhancer effect on regulation of genes in a nitrate responsive "biomodule". PMID:19500399
Omics-based approaches to methionine side chain elongation in Arabidopsis: characterization of the genes encoding methylthioalkylmalate isomerase and methylthioalkylmalate dehydrogenase. PMID:19493961
Functional analysis of transcription factors in Arabidopsis. PMID:19478073
BAHD superfamily of acyl-CoA dependent acyltransferases in Populus and Arabidopsis: bioinformatics and gene expression. PMID:19343509
Computational identification of condition-specific miRNA targets based on gene expression profiles and sequence information. PMID:19208135
Temporal global expression data reveal known and novel salicylate-impacted processes and regulators mediating powdery mildew growth and reproduction on Arabidopsis. PMID:19176722
Widely targeted metabolomics based on large-scale MS/MS data for elucidating metabolite accumulation patterns in plants. PMID:19054808
KAGIANA: an excel-based tool for retrieving summary information on Arabidopsis genes. PMID:19043069
Arabidopsis At5g39790 encodes a chloroplast-localized, carbohydrate-binding, coiled-coil domain-containing putative scaffold protein. PMID:19038037
ATTED-II provides coexpressed gene networks for Arabidopsis. PMID:18953027
Genes of the most conserved WOX clade in plants affect root and flower development in Arabidopsis. PMID:18950478
SVD-based anatomy of gene expressions for correlation analysis in Arabidopsis thaliana. PMID:18931094
Regulon organization of Arabidopsis. PMID:18826618
The rules of gene expression in plants: organ identity and gene body methylation are key factors for regulation of gene expression in Arabidopsis thaliana. PMID:18811951
The AtrbohD-mediated oxidative burst elicited by oligogalacturonides in Arabidopsis is dispensable for the activation of defense responses effective against Botrytis cinerea. PMID:18790995
Beta-subunits of the SnRK1 complexes share a common ancestral function together with expression and function specificities; physical interaction with nitrate reductase specifically occurs via AKINbeta1-subunit. PMID:18768910
Navigating public microarray databases. PMID:18629145
Articulation of three core metabolic processes in Arabidopsis: fatty acid biosynthesis, leucine catabolism and starch metabolism. PMID:18616834
Arabidopsis reactome: a foundation knowledgebase for plant systems biology. PMID:18591350
Bioinformatic tools for inferring functional information from plant microarray data: tools for the first steps. PMID:18528524
MTA is an Arabidopsis messenger RNA adenosine methylase and interacts with a homolog of a sex-specific splicing factor. PMID:18505803
A plant resource and experiment management system based on the Golm Plant Database as a basic tool for omics research. PMID:18495032
CressExpress: a tool for large-scale mining of expression data from Arabidopsis. PMID:18467456
Disruption of the Arabidopsis circadian clock is responsible for extensive variation in the cold-responsive transcriptome. PMID:18375597
Co-expression and promoter content analyses assign a role in biotic and abiotic stress responses to plant natriuretic peptides. PMID:18307823
Cell-specific nitrogen responses mediate developmental plasticity. PMID:18180456
Arabidopsis UEV1D promotes Lysine-63-linked polyubiquitination and is involved in DNA damage response. PMID:18178771
Evolutionary radiation pattern of novel protein phosphatases revealed by analysis of protein data from the completely sequenced genomes of humans, green algae, and higher plants. PMID:18156295
PlantTribes: a gene and gene family resource for comparative genomics in plants. PMID:18073194
Network inference, analysis, and modeling in systems biology. PMID:18055607
The origin and function of calmodulin regulated Ca2+ pumps in plants. PMID:18000746
An Arabidopsis gene network based on the graphical Gaussian model. PMID:17921353
Optimising the analysis of transcript data using high density oligonucleotide arrays and genomic DNA-based probe selection. PMID:17908303
Combining classifiers to predict gene function in Arabidopsis thaliana using large-scale gene expression measurements. PMID:17888165
Transcript profiling of the hypomethylated hog1 mutant of Arabidopsis. PMID:17786563
Putative cold acclimation pathways in Arabidopsis thaliana identified by a combined analysis of mRNA co-expression patterns, promoter motifs and transcription factors. PMID:17764576
An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets. PMID:17684564
Functional Associations by Response Overlap (FARO), a functional genomics approach matching gene expression phenotypes. PMID:17668056
Arabidopsis Gene Family Profiler (aGFP)--user-oriented transcriptomic database with easy-to-use graphic interface. PMID:17645793
DGEM--a microarray gene expression database for primary human disease tissues. PMID:17570735
Endogenous peptide defense signals in Arabidopsis differentially amplify signaling for the innate immune response. PMID:17566109
The transcription corepressor LEUNIG interacts with the histone deacetylase HDA19 and mediator components MED14 (SWP) and CDK8 (HEN3) to repress transcription. PMID:17526732
The GH3 acyl adenylase family member PBS3 regulates salicylic acid-dependent defense responses in Arabidopsis. PMID:17468220
Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression. PMID:17408486
Molecular characterisation of the STRUBBELIG-RECEPTOR FAMILY of genes encoding putative leucine-rich repeat receptor-like kinases in Arabidopsis thaliana. PMID:17397538
Conservation, convergence, and divergence of light-responsive, circadian-regulated, and tissue-specific expression patterns during evolution of the Arabidopsis GATA gene family. PMID:17208962
Transcriptional profiling of the Arabidopsis embryo. PMID:17189330
Identification of microspore-active promoters that allow targeted manipulation of gene expression at early stages of microgametogenesis in Arabidopsis. PMID:17184530
PageMan: an interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. PMID:17176458
AthaMap web tools for the analysis and identification of co-regulated genes. PMID:17148485
AtPTR3, a wound-induced peptide transporter needed for defence against virulent bacterial pathogens in Arabidopsis. PMID:17143616
The plant structure ontology, a unified vocabulary of anatomy and morphology of a flowering plant. PMID:17142475
ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis. PMID:17130150
PathoPlant: a platform for microarray expression data to analyze co-regulated genes involved in plant defense responses. PMID:17099232
Large-scale cis-element detection by analysis of correlated expression and sequence conservation between Arabidopsis and Brassica oleracea. PMID:17028152
The reactive oxygen species network pathways:an essential prerequisite for perception of pathogen attack and the acquired disease resistance in plants. PMID:17006022
Identifying functional gene sets from hierarchically clustered expression data: map of abiotic stress regulated genes in Arabidopsis thaliana. PMID:17003050
Global comparative transcriptome analysis identifies gene network regulating secondary xylem development in Arabidopsis thaliana. PMID:16969662
Arabidopsis Co-expression Tool (ACT): web server tools for microarray-based gene expression analysis. PMID:16845059
An endogenous peptide signal in Arabidopsis activates components of the innate immune response. PMID:16785434
Integrating membrane transport with male gametophyte development and function through transcriptomics. PMID:16607029
Transcriptomic footprints disclose specificity of reactive oxygen species signaling in Arabidopsis. PMID:16603662
Nonrandom divergence of gene expression following gene and genome duplications in the flowering plant Arabidopsis thaliana. PMID:16507168
The Arabidopsis zinc finger-homeodomain genes encode proteins with unique biochemical properties that are coordinately expressed during floral development. PMID:16428600
MIAME/Plant - adding value to plant microarrray experiments. PMID:16401339
Tomato Expression Database (TED): a suite of data presentation and analysis tools. PMID:16381976
Using genomic DNA-based probe-selection to improve the sensitivity of high-density oligonucleotide arrays when applied to heterologous species. PMID:16280083
Inferring hypotheses on functional relationships of genes: Analysis of the Arabidopsis thaliana subtilase gene family. PMID:16193095
Comparison of transcript profiling on Arabidopsis microarray platform technologies. PMID:16158238
Green sperm. Identification of male gamete promoters in Arabidopsis. PMID:16055690
Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses. PMID:16009995
Natural antisense transcripts with coding capacity in Arabidopsis may have a regulatory role that is not linked to double-stranded RNA degradation. PMID:15960803
Identification of genes required for cellulose synthesis by regression analysis of public microarray data sets. PMID:15932943
Identification of brassinosteroid-related genes by means of transcript co-response analyses. PMID:15891113
The Arabidopsis AtRaptor genes are essential for post-embryonic plant growth. PMID:15845148
Benchmarking the CATMA microarray. A novel tool for Arabidopsis transcriptome analysis. PMID:15710687
BarleyBase--an expression profiling database for plant genomics. PMID:15608273
Transcriptome analysis of haploid male gametophyte development in Arabidopsis. PMID:15535861
Expression of beta-galactosidase and beta-xylosidase genes during microspore and pollen development. PMID:15517348
GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. PMID:15375207
Formin homology 2 domains occur in multiple contexts in angiosperms. PMID:15256004
Transcriptional programs of early reproductive stages in Arabidopsis. PMID:15247381
A mutant of Arabidopsis lacking the triose-phosphate/phosphate translocator reveals metabolic regulation of starch breakdown in the light. PMID:15173568
Coexpression of neighboring genes in the genome of Arabidopsis thaliana. PMID:15173112
Tags:
Tags
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genome
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
insertion sequence
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
agriculture and energy
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
arabidopsis thaliana
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
bioinformatics
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
gene expression
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seed crops - biotechnology
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seed projects
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seeds
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Tags
More detailed information about this field from each metasource.
genome
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
insertion sequence
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
agriculture and energy
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
arabidopsis thaliana
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
bioinformatics
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
gene expression
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seed crops - biotechnology
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seed projects
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seeds
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
genome insertion sequence agriculture and energy bioinformatics gene expression seed crops - biotechnology seed projects seeds
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