Nottingham Arabidopsis Stock Centre Seeds Database
Names
More detailed information about this field from each metasource.
Nottingham Arabidopsis Stock Centre Seeds Database
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
NASC
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Nottingham Arabidopsis Stock Centre
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
The European Arabidopsis Stock Centre
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Names
More detailed information about this field from each metasource.
Nottingham Arabidopsis Stock Centre Seeds Database
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
NASC
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Nottingham Arabidopsis Stock Centre
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
The European Arabidopsis Stock Centre
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Other names: NASC, Nottingham Arabidopsis Stock Centre, The European Arabidopsis Stock Centre
Names
More detailed information about this field from each metasource.
Nottingham Arabidopsis Stock Centre Seeds Database
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
NASC
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Nottingham Arabidopsis Stock Centre
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
The European Arabidopsis Stock Centre
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
The Nottingham Arabidopsis Stock Centre (NASC) provides seed and information resources to the International Arabidopsis Genome Programme and the wider research community.
Description
More detailed information about this field from each metasource.
The Nottingham Arabidopsis Stock Centre (NASC) provides seed and information resources to the International Arabidopsis Genome Programme and the wider research community.
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
The Nottingham Arabidopsis Stock Centre (NASC) provides seed and information resources to Europe researchers.
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Webpage:
http://arabidopsis.infoWebpage
More detailed information about this field from each metasource.
http://arabidopsis.info
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
http://arabidopsis.info/
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Licence:
Name: Public DomainLicence name
More detailed information about this field from each metasource.
Public Domain
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Licence URL
More detailed information about this field from each metasource.
https://www.nottingham.ac.uk/biosciences/subject-areas/plantcrop/documents/newsletters/june-newsletter-2014.pdf
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Publications:
Publications
More detailed information about this field from each metasource.
NASCArrays: a repository for microarray data generated by NASC's transcriptomics service
PMID: 14681484
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
Publications
More detailed information about this field from each metasource.
NASCArrays: a repository for microarray data generated by NASC's transcriptomics service
PMID: 14681484
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
-
NASCArrays: a repository for microarray data generated by NASC's transcriptomics service
PubMed citations: 184.
184 articles citing: NASCArrays: a repository for microarray data generated by NASC's transcriptomics service
Prediction and expression analysis of deleterious nonsynonymous SNPs of Arabidopsis ACD11 gene by combining computational algorithms and molecular docking approach. PMID:35709304
Gene coexpression analysis in Arabidopsis thaliana based on public microarray data. PMID:35243384
Arabidopsis Coexpression Tool: a tool for gene coexpression analysis in Arabidopsis thaliana. PMID:34381973
Guard cells control hypocotyl elongation through HXK1, HY5, and PIF4. PMID:34155329
Identification of cis-regulatory motifs in first introns and the prediction of intron-mediated enhancement of gene expression in Arabidopsis thaliana. PMID:34039279
Arabidopsis UGT76B1 glycosylates N-hydroxy-pipecolic acid and inactivates systemic acquired resistance in tomato. PMID:33955491
Functional Implications of Active N6-Methyladenosine in Plants. PMID:32411708
Convergent Loss of an EDS1/PAD4 Signaling Pathway in Several Plant Lineages Reveals Coevolved Components of Plant Immunity and Drought Response. PMID:32409319
Identification of gene expression logical invariants in Arabidopsis. PMID:31245766
A genome-wide scan for correlated mutations detects macromolecular and chromatin interactions in Arabidopsis thaliana. PMID:29986106
Delineation of condition specific Cis- and Trans-acting elements in plant promoters under various Endo- and exogenous stimuli. PMID:29764390
Circadian clock components control daily growth activities by modulating cytokinin levels and cell division-associated gene expression in Populus trees. PMID:29520862
STRESS INDUCED FACTOR 2, a Leucine-Rich Repeat Kinase Regulates Basal Plant Pathogen Defense. PMID:29463771
Transcriptome dynamic of Arabidopsis roots infected with Phytophthora parasitica identifies VQ29, a gene induced during the penetration and involved in the restriction of infection. PMID:29281727
Metabolic Pathway Assignment of Plant Genes based on Phylogenetic Profiling-A Feasibility Study. PMID:29163570
Evolutionary history of callose synthases in terrestrial plants with emphasis on proteins involved in male gametophyte development. PMID:29131847
Utility and Limitations of Using Gene Expression Data to Identify Functional Associations. PMID:27935950
Tandem affinity purification of AtTERT reveals putative interaction partners of plant telomerase in vivo. PMID:27853871
The Plant Cell Wall: A Complex and Dynamic Structure As Revealed by the Responses of Genes under Stress Conditions. PMID:27559336
Recent Advances in Understanding the Molecular Mechanisms Regulating the Root System Response to Phosphate Deficiency in Arabidopsis. PMID:27499680
Keeping Control: The Role of Senescence and Development in Plant Pathogenesis and Defense. PMID:27135337
Genome-Wide Analysis of PAPS1-Dependent Polyadenylation Identifies Novel Roles for Functionally Specialized Poly(A) Polymerases in Arabidopsis thaliana. PMID:26305463
A P-Norm Robust Feature Extraction Method for Identifying Differentially Expressed Genes. PMID:26201006
RNA N6-methyladenosine methylation in post-transcriptional gene expression regulation. PMID:26159994
Molecular Evidence for Functional Divergence and Decay of a Transcription Factor Derived from Whole-Genome Duplication in Arabidopsis thaliana. PMID:26103993
Identification of Arabidopsis candidate genes in response to biotic and abiotic stresses using comparative microarrays. PMID:25933420
EXPath: a database of comparative expression analysis inferring metabolic pathways for plants. PMID:25708775
POEAS: Automated Plant Phenomic Analysis Using Plant Ontology. PMID:25574136
Transcriptome analysis reveals genes commonly induced by Botrytis cinerea infection, cold, drought and oxidative stresses in Arabidopsis. PMID:25422934
Wounding in the plant tissue: the defense of a dangerous passage. PMID:25278948
Characterization of putative cis-regulatory elements in genes preferentially expressed in Arabidopsis male meiocytes. PMID:25250331
Interactions Among Plant Transcription Factors Regulating Expression of Stress-responsive Genes. PMID:25249757
A class-information-based penalized matrix decomposition for identifying plants core genes responding to abiotic stresses. PMID:25180509
Integrating bioinformatic resources to predict transcription factors interacting with cis-sequences conserved in co-regulated genes. PMID:24773781
'In silico expression analysis', a novel PathoPlant web tool to identify abiotic and biotic stress conditions associated with specific cis-regulatory sequences. PMID:24727366
Plant systems biology: insights, advances and challenges. PMID:24671625
Fast retrograde signaling in response to high light involves metabolite export, MITOGEN-ACTIVATED PROTEIN KINASE6, and AP2/ERF transcription factors in Arabidopsis. PMID:24668746
HMA4 expression in tobacco reduces Cd accumulation due to the induction of the apoplastic barrier. PMID:24420575
Characterization and identification of cis-regulatory elements in Arabidopsis based on single-nucleotide polymorphism information. PMID:24204023
Specificity in ROS signaling and transcript signatures. PMID:24180661
Robust PCA based method for discovering differentially expressed genes. PMID:23815087
Identification of genes involved in the response of Arabidopsis to simultaneous biotic and abiotic stresses. PMID:23800991
Mapping gene activity of Arabidopsis root hairs. PMID:23800126
PLANEX: the plant co-expression database. PMID:23688397
Transcriptome Profiling Following Neuronal and Glial Expression of ALS-Linked SOD1 in Drosophila. PMID:23550139
Reverse engineering: a key component of systems biology to unravel global abiotic stress cross-talk. PMID:23293646
PRIMe Update: innovative content for plant metabolomics and integration of gene expression and metabolite accumulation. PMID:23292601
Recent developments in plant zinc homeostasis and the path toward improved biofortification and phytoremediation programs. PMID:23221755
De novo production of the flavonoid naringenin in engineered Saccharomyces cerevisiae. PMID:23216753
The MORPH algorithm: ranking candidate genes for membership in Arabidopsis and tomato pathways. PMID:23204403
Visual analysis of transcriptome data in the context of anatomical structures and biological networks. PMID:23162564
G protein-coupled receptor-type G proteins are required for light-dependent seedling growth and fertility in Arabidopsis. PMID:23001037
The salicylic acid dependent and independent effects of NMD in plants. PMID:22990450
Metabolic module mining based on Independent Component Analysis in Arabidopsis thaliana. PMID:22960738
Computational selection of transcriptomics experiments improves Guilt-by-Association analyses. PMID:22879875
Unique drought resistance functions of the highly ABA-induced clade A protein phosphatase 2Cs. PMID:22829320
Characteristic gene selection via weighting principal components by singular values. PMID:22808018
Frequency-based time-series gene expression recomposition using PRIISM. PMID:22703599
Identification of metagenes and their interactions through large-scale analysis of Arabidopsis gene expression data. PMID:22694750
Tackling drought stress: receptor-like kinases present new approaches. PMID:22693282
Gene regulation by cytokinin in Arabidopsis. PMID:22639635
ArraySearch: A Web-Based Genomic Search Engine. PMID:22474412
A role for nonsense-mediated mRNA decay in plants: pathogen responses are induced in Arabidopsis thaliana NMD mutants. PMID:22384098
Salicylic Acid biosynthesis and metabolism. PMID:22303280
Identification of putative cancer genes through data integration and comparative genomics between plants and humans. PMID:22218400
Gene expression changes in phosphorus deficient potato (Solanum tuberosum L.) leaves and the potential for diagnostic gene expression markers. PMID:21935429
Genome-wide landscape of polyadenylation in Arabidopsis provides evidence for extensive alternative polyadenylation. PMID:21746925
A transcriptional analysis of carotenoid, chlorophyll and plastidial isoprenoid biosynthesis genes during development and osmotic stress responses in Arabidopsis thaliana. PMID:21595952
Evolutionary history of the GH3 family of acyl adenylases in rosids. PMID:21594748
Coordinated gene networks regulating Arabidopsis plant metabolism in response to various stresses and nutritional cues. PMID:21487096
REVEILLE8 and PSEUDO-REPONSE REGULATOR5 form a negative feedback loop within the Arabidopsis circadian clock. PMID:21483796
The predicted Arabidopsis interactome resource and network topology-based systems biology analyses. PMID:21441435
Phylogenetic comparison of F-Box (FBX) gene superfamily within the plant kingdom reveals divergent evolutionary histories indicative of genomic drift. PMID:21297981
Investigating the effect of paralogs on microarray gene-set analysis. PMID:21261946
ATTED-II updates: condition-specific gene coexpression to extend coexpression analyses and applications to a broad range of flowering plants. PMID:21217125
Predicting genome-wide redundancy using machine learning. PMID:21087504
Gene networks for nitrogen sensing, signaling, and response in Arabidopsis thaliana. PMID:20890965
GreenPhylDB v2.0: comparative and functional genomics in plants. PMID:20864446
A Brassica exon array for whole-transcript gene expression profiling. PMID:20862292
LIL3, a light-harvesting-like protein, plays an essential role in chlorophyll and tocopherol biosynthesis. PMID:20823244
Gene Expression Browser: large-scale and cross-experiment microarray data integration, management, search & visualization. PMID:20727159
Coexpression landscape in ATTED-II: usage of gene list and gene network for various types of pathways. PMID:20383554
Toward genome-wide metabolotyping and elucidation of metabolic system: metabolic profiling of large-scale bioresources. PMID:20369372
TobEA: an atlas of tobacco gene expression from seed to senescence. PMID:20187945
Transcriptional profiling of the Arabidopsis iron deficiency response reveals conserved transition metal homeostasis networks. PMID:20181752
Documentation system for plant transformation service and research. PMID:20181025
Coexpression analysis of tomato genes and experimental verification of coordinated expression of genes found in a functionally enriched coexpression module. PMID:20130013
The Arabidopsis wall associated kinase-like 10 gene encodes a functional guanylyl cyclase and is co-expressed with pathogen defense related genes. PMID:20126659
In silico evaluation of predicted regulatory interactions in Arabidopsis thaliana. PMID:20025756
AtMetExpress development: a phytochemical atlas of Arabidopsis development. PMID:20023150
VirtualPlant: a software platform to support systems biology research. PMID:20007449
Plant MetGenMAP: an integrative analysis system for plant systems biology. PMID:19819981
Unsupervised meta-analysis on diverse gene expression datasets allows insight into gene function and regulation. PMID:19812781
Rank of correlation coefficient as a comparable measure for biological significance of gene coexpression. PMID:19767600
From gene expression to gene regulatory networks in Arabidopsis thaliana. PMID:19728870
Lessons from investigation of regulation of APS reductase by salt stress. PMID:19704471
Multi-dimensional correlations for gene coexpression and application to the large-scale data of Arabidopsis. PMID:19620096
Predicting protein-protein interactions in Arabidopsis thaliana through integration of orthology, gene ontology and co-expression. PMID:19563678
HORMONOMETER: a tool for discerning transcript signatures of hormone action in the Arabidopsis transcriptome. PMID:19535475
Internet Resources for Gene Expression Analysis in Arabidopsis thaliana. PMID:19506727
A system biology approach highlights a hormonal enhancer effect on regulation of genes in a nitrate responsive "biomodule". PMID:19500399
Omics-based approaches to methionine side chain elongation in Arabidopsis: characterization of the genes encoding methylthioalkylmalate isomerase and methylthioalkylmalate dehydrogenase. PMID:19493961
Functional analysis of transcription factors in Arabidopsis. PMID:19478073
BAHD superfamily of acyl-CoA dependent acyltransferases in Populus and Arabidopsis: bioinformatics and gene expression. PMID:19343509
Computational identification of condition-specific miRNA targets based on gene expression profiles and sequence information. PMID:19208135
Temporal global expression data reveal known and novel salicylate-impacted processes and regulators mediating powdery mildew growth and reproduction on Arabidopsis. PMID:19176722
Widely targeted metabolomics based on large-scale MS/MS data for elucidating metabolite accumulation patterns in plants. PMID:19054808
KAGIANA: an excel-based tool for retrieving summary information on Arabidopsis genes. PMID:19043069
Arabidopsis At5g39790 encodes a chloroplast-localized, carbohydrate-binding, coiled-coil domain-containing putative scaffold protein. PMID:19038037
ATTED-II provides coexpressed gene networks for Arabidopsis. PMID:18953027
Genes of the most conserved WOX clade in plants affect root and flower development in Arabidopsis. PMID:18950478
SVD-based anatomy of gene expressions for correlation analysis in Arabidopsis thaliana. PMID:18931094
Regulon organization of Arabidopsis. PMID:18826618
The rules of gene expression in plants: organ identity and gene body methylation are key factors for regulation of gene expression in Arabidopsis thaliana. PMID:18811951
The AtrbohD-mediated oxidative burst elicited by oligogalacturonides in Arabidopsis is dispensable for the activation of defense responses effective against Botrytis cinerea. PMID:18790995
Beta-subunits of the SnRK1 complexes share a common ancestral function together with expression and function specificities; physical interaction with nitrate reductase specifically occurs via AKINbeta1-subunit. PMID:18768910
Navigating public microarray databases. PMID:18629145
Articulation of three core metabolic processes in Arabidopsis: fatty acid biosynthesis, leucine catabolism and starch metabolism. PMID:18616834
Arabidopsis reactome: a foundation knowledgebase for plant systems biology. PMID:18591350
Bioinformatic tools for inferring functional information from plant microarray data: tools for the first steps. PMID:18528524
MTA is an Arabidopsis messenger RNA adenosine methylase and interacts with a homolog of a sex-specific splicing factor. PMID:18505803
A plant resource and experiment management system based on the Golm Plant Database as a basic tool for omics research. PMID:18495032
CressExpress: a tool for large-scale mining of expression data from Arabidopsis. PMID:18467456
Disruption of the Arabidopsis circadian clock is responsible for extensive variation in the cold-responsive transcriptome. PMID:18375597
Co-expression and promoter content analyses assign a role in biotic and abiotic stress responses to plant natriuretic peptides. PMID:18307823
Cell-specific nitrogen responses mediate developmental plasticity. PMID:18180456
Arabidopsis UEV1D promotes Lysine-63-linked polyubiquitination and is involved in DNA damage response. PMID:18178771
Evolutionary radiation pattern of novel protein phosphatases revealed by analysis of protein data from the completely sequenced genomes of humans, green algae, and higher plants. PMID:18156295
PlantTribes: a gene and gene family resource for comparative genomics in plants. PMID:18073194
Network inference, analysis, and modeling in systems biology. PMID:18055607
The origin and function of calmodulin regulated Ca2+ pumps in plants. PMID:18000746
An Arabidopsis gene network based on the graphical Gaussian model. PMID:17921353
Optimising the analysis of transcript data using high density oligonucleotide arrays and genomic DNA-based probe selection. PMID:17908303
Combining classifiers to predict gene function in Arabidopsis thaliana using large-scale gene expression measurements. PMID:17888165
Transcript profiling of the hypomethylated hog1 mutant of Arabidopsis. PMID:17786563
Putative cold acclimation pathways in Arabidopsis thaliana identified by a combined analysis of mRNA co-expression patterns, promoter motifs and transcription factors. PMID:17764576
An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets. PMID:17684564
Functional Associations by Response Overlap (FARO), a functional genomics approach matching gene expression phenotypes. PMID:17668056
Arabidopsis Gene Family Profiler (aGFP)--user-oriented transcriptomic database with easy-to-use graphic interface. PMID:17645793
DGEM--a microarray gene expression database for primary human disease tissues. PMID:17570735
Endogenous peptide defense signals in Arabidopsis differentially amplify signaling for the innate immune response. PMID:17566109
The transcription corepressor LEUNIG interacts with the histone deacetylase HDA19 and mediator components MED14 (SWP) and CDK8 (HEN3) to repress transcription. PMID:17526732
The GH3 acyl adenylase family member PBS3 regulates salicylic acid-dependent defense responses in Arabidopsis. PMID:17468220
Integration of Arabidopsis thaliana stress-related transcript profiles, promoter structures, and cell-specific expression. PMID:17408486
Molecular characterisation of the STRUBBELIG-RECEPTOR FAMILY of genes encoding putative leucine-rich repeat receptor-like kinases in Arabidopsis thaliana. PMID:17397538
Conservation, convergence, and divergence of light-responsive, circadian-regulated, and tissue-specific expression patterns during evolution of the Arabidopsis GATA gene family. PMID:17208962
Transcriptional profiling of the Arabidopsis embryo. PMID:17189330
Identification of microspore-active promoters that allow targeted manipulation of gene expression at early stages of microgametogenesis in Arabidopsis. PMID:17184530
PageMan: an interactive ontology tool to generate, display, and annotate overview graphs for profiling experiments. PMID:17176458
AthaMap web tools for the analysis and identification of co-regulated genes. PMID:17148485
AtPTR3, a wound-induced peptide transporter needed for defence against virulent bacterial pathogens in Arabidopsis. PMID:17143616
The plant structure ontology, a unified vocabulary of anatomy and morphology of a flowering plant. PMID:17142475
ATTED-II: a database of co-expressed genes and cis elements for identifying co-regulated gene groups in Arabidopsis. PMID:17130150
PathoPlant: a platform for microarray expression data to analyze co-regulated genes involved in plant defense responses. PMID:17099232
Large-scale cis-element detection by analysis of correlated expression and sequence conservation between Arabidopsis and Brassica oleracea. PMID:17028152
The reactive oxygen species network pathways:an essential prerequisite for perception of pathogen attack and the acquired disease resistance in plants. PMID:17006022
Identifying functional gene sets from hierarchically clustered expression data: map of abiotic stress regulated genes in Arabidopsis thaliana. PMID:17003050
Global comparative transcriptome analysis identifies gene network regulating secondary xylem development in Arabidopsis thaliana. PMID:16969662
Arabidopsis Co-expression Tool (ACT): web server tools for microarray-based gene expression analysis. PMID:16845059
An endogenous peptide signal in Arabidopsis activates components of the innate immune response. PMID:16785434
Integrating membrane transport with male gametophyte development and function through transcriptomics. PMID:16607029
Transcriptomic footprints disclose specificity of reactive oxygen species signaling in Arabidopsis. PMID:16603662
Nonrandom divergence of gene expression following gene and genome duplications in the flowering plant Arabidopsis thaliana. PMID:16507168
The Arabidopsis zinc finger-homeodomain genes encode proteins with unique biochemical properties that are coordinately expressed during floral development. PMID:16428600
MIAME/Plant - adding value to plant microarrray experiments. PMID:16401339
Tomato Expression Database (TED): a suite of data presentation and analysis tools. PMID:16381976
Using genomic DNA-based probe-selection to improve the sensitivity of high-density oligonucleotide arrays when applied to heterologous species. PMID:16280083
Inferring hypotheses on functional relationships of genes: Analysis of the Arabidopsis thaliana subtilase gene family. PMID:16193095
Comparison of transcript profiling on Arabidopsis microarray platform technologies. PMID:16158238
Green sperm. Identification of male gamete promoters in Arabidopsis. PMID:16055690
Extension of the visualization tool MapMan to allow statistical analysis of arrays, display of corresponding genes, and comparison with known responses. PMID:16009995
Natural antisense transcripts with coding capacity in Arabidopsis may have a regulatory role that is not linked to double-stranded RNA degradation. PMID:15960803
Identification of genes required for cellulose synthesis by regression analysis of public microarray data sets. PMID:15932943
Identification of brassinosteroid-related genes by means of transcript co-response analyses. PMID:15891113
The Arabidopsis AtRaptor genes are essential for post-embryonic plant growth. PMID:15845148
Benchmarking the CATMA microarray. A novel tool for Arabidopsis transcriptome analysis. PMID:15710687
BarleyBase--an expression profiling database for plant genomics. PMID:15608273
Transcriptome analysis of haploid male gametophyte development in Arabidopsis. PMID:15535861
Expression of beta-galactosidase and beta-xylosidase genes during microspore and pollen development. PMID:15517348
GENEVESTIGATOR. Arabidopsis microarray database and analysis toolbox. PMID:15375207
Formin homology 2 domains occur in multiple contexts in angiosperms. PMID:15256004
Transcriptional programs of early reproductive stages in Arabidopsis. PMID:15247381
A mutant of Arabidopsis lacking the triose-phosphate/phosphate translocator reveals metabolic regulation of starch breakdown in the light. PMID:15173568
Coexpression of neighboring genes in the genome of Arabidopsis thaliana. PMID:15173112
Tags:
Tags
More detailed information about this field from each metasource.
genome
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
insertion sequence
metasource: Fairsharing.org
version: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
agriculture and energy
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
arabidopsis thaliana
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
bioinformatics
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
gene expression
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seed crops - biotechnology
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seed projects
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seeds
metasource: re3data.org
version: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
Tags
More detailed information about this field from each metasource.
genome
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
insertion sequence
metasource: Fairsharing.orgversion: FAIRsharing.org: NASC; Nottingham Arabidopsis Stock Centre Seeds Database; DOI: https://doi.org/10.25504/FAIRsharing.2sqcxs; Last edited: Jan. 8, 2019, 1:15 p.m.; Last accessed: Jan 03 2022 7:05 p.m.
agriculture and energy
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
arabidopsis thaliana
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
bioinformatics
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
gene expression
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seed crops - biotechnology
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seed projects
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
seeds
metasource: re3data.orgversion: re3data.org: NASC; editing status 2021-07-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R38P7T last accessed: 2022-11-04
genome insertion sequence agriculture and energy bioinformatics gene expression seed crops - biotechnology seed projects seeds
Need help integrating and/or managing biomedical data?