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NIHR IBD BioResource: Sample holding

NIHR IBD BioResource samples are held at the NIHR National Biosample Centre in Milton Keynes. Metadata on what is available should become available through the UK CRC Tissue Directory, as mandated by Research Tissue Bank status.

Description

More detailed information about this field from each metasource.

NIHR IBD BioResource samples are held at the NIHR National Biosample Centre in Milton Keynes. Metadata on what is available should become available through the UK CRC Tissue Directory, as mandated by Research Tissue Bank status.

metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

Webpage:

https://www.healthdatagateway.org/dataset/04f28919-aa6c-4beb-b186-0ad0043c1c6c

Webpage

More detailed information about this field from each metasource.

https://www.healthdatagateway.org/dataset/04f28919-aa6c-4beb-b186-0ad0043c1c6c

metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

Licence:

Name: HDR UK Innovation Gateway Access

Licence name

More detailed information about this field from each metasource.

HDR UK Innovation Gateway Access

metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

URL: https://www.hdruk.ac.uk/infrastructure/gateway/terms-and-conditions/

Licence URL

More detailed information about this field from each metasource.

https://www.hdruk.ac.uk/infrastructure/gateway/terms-and-conditions/

metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

Tags:

Tags
More detailed information about this field from each metasource.

Crohn's
metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

DNA
metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

IBD
metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

colitis
metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

plasma
metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

recall
metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

samples
metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

sera
metasource: HDR UK
version: extracted_at: 2022-09-05T08:28:24.125862

crohn's dna ibd colitis plasma recall samples sera

More to explore:

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NIHR BioResource: Sample holding

NIHR BioResource samples are held at the NIHR National Biosample Centre in Milton Keynes. Metadata on what is available should become available through the UK CRC Tissue Directory, as mandated by Rese ...

NIHR IBD BioResource: Demographic

The NIHR IBD BioResource acquires broad demographics – e.g. age, sex, ethnicity - from participants at recruitment. This is used to pre-screen or match participants when inviting them to take part in ...

NIHR IBD BioResource: Contact detail

The NIHR IBD BioResource acquires contact details - name, address, email address, phone/mobile number - from participants at recruitment. This is used to re-contact participants to invite them to take ...

NIHR IBD BioResource: SNP imputation data

SNP chip data can be used to impute many of the (non-rare) SNPs not included on the chips. The NIHR IBD BioResource is using a modified version of the UK Biobank protocol to improve the options for r ...

NIHR IBD BioResource: Health and Lifestyle Questionnaire

Most NIHR IBD BioResource participants complete a self-report form on recruitment. Typically this contains e.g. height, weight, smoking history and alcohol consumption, but also includes questions rel ...

NIHR IBD BioResource: Consent records

The NIHR IBD BioResource records consent dates and versions for each and every participant consent event. We also record use of opt-ins and opt-outs including pre-GDPR. This permits us to manage data ...

NIHR IBD BioResource: Case report form

Each participant recruited has an IBD-specific CRF completed by their clinical care team. These are non-exhaustive - we have the chance to ask for more information - but form the basis of analysis and ...

NIHR IBD BioResource: NHS Trust data

10 NHS Trusts have been asked to provide detailed data on participants in their Trust. Categories of data requested include: test results; prescribing; imaging; digital pathology; data from disease-sp ...

NIHR IBD BioResource: SNP chip data

In order to do recall by genotype, participants have their DNA tested using one the SNP chip arrays from eg. Illumina and Affymetrix (now Thermosfisher). The current iteration is the UK Biobank v2.1 ...

Wellcome Sanger Institute: Whole Exome Sequencing

There is a substantial overlap between the NIHR IBD BioResource and the IBD UK Genetics Consortium (IBDGC). The NIHR BioResource provides some DNA samples. IBDGC data is being provided by the Wellcome ...

IBD Registry

The IBD Registry captures longitudinal clinical data on IBD patients from NHS Trusts. The dataset includes demographics; diagnosis and phenotype; medications (greater details on biologics); interventi ...

NIHR BioResource: Returned datasets

The NIHR BioResource asks those collecting data on participants as part of sample-only or recall studies to offer data for re-use by others. These offers may be taken up in future.

Leeds NIHR Biomarker Research Tissue Bank

Collection of samples and data across the following diseases: Cirrhosis of liver (disorder), Fit and well, Malignant tumour of kidney (disorder), Recipient of transplantation (finding). Background: Th ...

NIHR BioResource: Demographic

The NIHR BioResource acquires broad demographics – e.g. age, sex, ethnicity - from participants at recruitment. This is used to pre-screen or match participants when inviting them to take part in exp ...

NIHR BioResource: Contact detail

The NIHR BioResource acquires contact details - name, address, email address, phone/mobile number - from participants at recruitment. This is used to recontact participants to invite them to take part ...

NIHR BioResource: SNP imputation data

SNP chip data can be used to impute many of the (non-rare) SNPs not included on the chips. The NIHR BioResource is using a modified version of the UK Biobank protocol to improve the options for recal ...

NIHR BioResource: Consent records

The NIHR BioResource records consent dates and versions for each and every participant consent event. We also record use of opt-ins and opt-outs including pre-GDPR. This permits us to manage data rel ...

NIHR BioResource: Whole Genome Sequencing

The NIHR BioResource ran the pilot for GEL's 100,000 Genomes Project. Most of the participants with rare disease were recruited on the basis of having no known diagnosis, and have had extensive work u ...

NIHR BioResource: Metabolite data

Some of the general population participants have had sera or plasma measured for metabolites, using Metabolon technology.

NIHR BioResource: Health and Lifestyle Questionnaire

Most NIHR BioResource participants complete a self-report form on recruitment. Typically this contains e.g. height, weight, smoking history and alcohol consumption, but also includes questions relati ...

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Data is amalgamated and only retrieved periodically.
Some of the resources used by the system:

® FAIRsharing.org
® Bioontology/Bioportal Terms
® Nucleic Acid Research - Database
® re3data.org
® bio.tools
® PubMed - Courtesy of the U.S. National Library of Medicine