A new phylogenetic data standard for computable clade definitions: the Phyloreference Exchange Format (Phyx).
PMID:35186448
BioHackathon 2015: Semantics of data for life sciences and reproducible research.
PMID:32308977
The Orthology Ontology: development and applications.
PMID:27259657
Evolutionary relationships among barley and Arabidopsis core circadian clock and clock-associated genes.
PMID:25608480
Big data and other challenges in the quest for orthologs.
PMID:25064571
Advancing data reuse in phyloinformatics using an ontology-driven Semantic Web approach.
PMID:24565381
Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient.
PMID:23668630
A semantic model for species description applied to the ensign wasps (hymenoptera: evaniidae) of New Caledonia.
PMID:23652347
EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats.
PMID:23479348
The 3rd DBCLS BioHackathon: improving life science data integration with Semantic Web technologies.
PMID:23398680
Bio.Phylo: a unified toolkit for processing, analyzing and visualizing phylogenetic trees in Biopython.
PMID:22909249
NeXML: rich, extensible, and verifiable representation of comparative data and metadata.
PMID:22357728
CDAO-store: ontology-driven data integration for phylogenetic analysis.
PMID:21496247
BIO::Phylo-phyloinformatic analysis using perl.
PMID:21352572
Next generation models for storage and representation of microbial biological annotation.
PMID:20946598
Phenex: ontological annotation of phenotypic diversity.
PMID:20463926