Other names: cogvic
COGVIC(Catalogue Of Germline Variants In Cancer). A comprehensive database of germline pathogenic variants in East Asian pan-cancer patients.
oncology dna polymorphism gene transcripts rna sequence exome sequencing
CIViC is an expert-crowdsourced knowledgebase for Clinical Interpretation of Variants in Cancer describing the therapeutic, prognostic, diagnostic and predisposing relevance of inherited and somatic v ...
Database of fusion transcripts in Arabidopsis thaliana.
The Catalogue of Somatic Mutations in Cancer (COSMIC) is a database of manually-curated somatic mutation information relating to human cancers. The COSMIC database combines manually-curated data and g ...
An ethnic-specific database of Indian germline variants.
Novel disease-associated variants, common sequence variants, and results from newborn screening. The Pompe disease GAA variant database represents an effort to collect all known variants in the GAA g ...
Barley reference transcript dataset to determine accurate changes in the barley transcriptome using RNA-seq.
Cancer-Specific CircRNA Databse(CSCD) is an integrated interactional database of cancer-specific circular RNAs.
A platform for evidence-based drug annotation for genetic variants in cancer
A database of pan-cancer analysis and systematic functional annotation for lncRNAs from RNA-sequencing data.
The Database of Genomic Variants (DGV) is a publicly accessible, comprehensive curated catalogue of structural variation (SV) found in the genomes of control individuals from worldwide populations.
A database of enhancer-associated insertion and deletion variants by analysis of H3K27ac ChIP-Seq. Cancer hallmarks rely on its specific transcriptional programs, which are dysregulated by multiple m ...
The availability of genetic variants, together with phenotypic annotations from model organisms, facilitates comparing these variants with equivalent variants in humans. However, existing databases an ...
denovo-db is a collection of germline de novo variants identified in the human genome. de novo variants are those present in children but not their parents.
Lnc2Cancer 3.0 includes comprehensive data on experimentally supported long non-coding RNAs (lncRNAs) and circular RNAs (circRNAs) associated with human cancers. In addition, web tools for analyzing l ...
Integrated genome database for lancelet, comparing domain types and combination in orthologues among lancelet and other species.
riboCIRC is a comprehensive database of translatable circRNAs. Translation of circular RNAs (circRNAs) now has drawn increasing attention from researchers due to their emerging roles of the functional ...
An annotated and reviewed database of methylation in cancer. It is based on automated textmining of literature and is afterwards manually curated and annotated.
Dual RNA-seq host-pathogen sequencing
The Cancer Biomarkers database is curated and maintained by several clinical and scientific experts in the field of precision oncology. It contains information on genomic biomarkers (genes, including ...
NHLBI Exome Sequencing Project (ESP): Exome Variant Server (EVS) for browsing single nucleotide variation data from exome sequencing experiments mainly focused on heart, lung and blood disorders.