BioSilico

RNApathwaysDB

A database of RNA processing pathways

PMAP

Proteolysis Map

ECMDB

Escherichia coli Metabolome Database

ClusterMine360

Microbial PKS/NRPS Biosynthesis

CeCaFDB

Carbon flux data of central metabolism in various organisms

MultitaskProtDB-II

Bionemo

Curated information about biodegradation-related genes and proteins

SYSTOMONAS

SYSTOMONAS (SYSTems biology of pseudOMONAS, http://www.systomonas.de) is a database on pseudomonads providing data and tools on metabolic network reconstruction, gene-regulatory networks, visualizatio ...

TCSBN

Pathway Commons

Pathway Commons is a convenient point of access to biological pathway information collected from public pathway databases. Information is sourced from public pathway databases and is readily searched, ...

AgingChart

Pathways of age-related processes

CGDB

Circadian Gene database

MetaCrop 2.0

The MetaCrop resource contains information on the major metabolic pathways mainly in crops of agricultural and economic importance. The database includes manually curated information on reactions and ...

Pathguide

Pathguide: the Pathway Resource List (http://pathguide.org) is a meta-database that provides an overview of more than 190 web-accessible biological pathway and network databases. These include databas ...

BioCyc

The BioCyc collection of Pathway/Genome Databases (PGDBs) provides electronic reference sources on the pathways and genomes of hundreds of organisms with completely sequenced genomes. Each database co ...

Small Molecule Pathway Database

The Small Molecule Pathway Database (SMPDB) contains small molecule pathways found in humans, which are presented visually. All SMPDB pathways include information on the relevant organs, subcellular c ...

KBDOCK

Protein domain interactions and interfaces

pathDIP

Pathway data integration and analysis portal

MetaCyc

MetaCyc is the largest curated collection of metabolic pathways currently available. It provides a comprehensive resource for metabolic pathways and enzymes from all domains of life. The pathways in M ...