Autophagy Database

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Autophagy Database

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

metasource: re3data.org
version: re3data.org: Autophagy Database; editing status 2017-12-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3J786 last accessed: 2022-11-04

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The Autophagy Database

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:34.231588

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the_autophagy_database

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:34.231588

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Other names: The Autophagy Database, the_autophagy_database

Proteins involved in self-digestion of eukaryotic cells

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Publications

More detailed information about this field from each metasource. ×

The Autophagy Database: an all-inclusive information resource on autophagy that provides nourishment for research
PMID: 20972215

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:34.231588

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http://nar.oxfordjournals.org/content/39/suppl_1/D991

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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• The Autophagy Database: an all-inclusive information resource on autophagy that provides nourishment for research PubMed citations: 47.

  47 articles citing: The Autophagy Database: an all-inclusive information resource on autophagy that provides nourishment for research

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  Low Expression of SLC7A11 Confers Drug Resistance and Worse Survival in Ovarian Cancer via Inhibition of Cell Autophagy as a Competing Endogenous RNA. PMID:34790572

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  Identification of Autophagy- and Ferroptosis-Related lncRNAs Functioned through Immune-Related Pathways in Head and Neck Squamous Carcinoma. PMID:34440579

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  Novel Autophagy-Related Gene Signature Investigation for Patients With Oral Squamous Cell Carcinoma. PMID:34220946

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  An autophagy-related prognostic signature associated with immune microenvironment features of uveal melanoma. PMID:33682883

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  Guidelines for the use and interpretation of assays for monitoring autophagy (4th edition)1. PMID:33634751

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  Kaiso (ZBTB33) subcellular partitioning functionally links LC3A/B, the tumor microenvironment, and breast cancer survival. PMID:33526872

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  Autophagy Regulatory Genes MET and RIPK2 Play a Prognostic Role in Pancreatic Ductal Adenocarcinoma: A Bioinformatic Analysis Based on GEO and TCGA. PMID:33204717

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  Tracing the footsteps of autophagy in computational biology. PMID:33201177

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  Identification of Molecular Network Associated with Neuroprotective Effects of Yashtimadhu (Glycyrrhiza glabra L.) by Quantitative Proteomics of Rotenone-Induced Parkinson's Disease Model. PMID:33110989

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  An autophagy-related model of 4 key genes for predicting prognosis of patients with laryngeal cancer. PMID:32791689

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  Autophagy and Tumor Database: ATdb, a novel database connecting autophagy and tumor. PMID:32681639

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  Using Reactome to build an autophagy mechanism knowledgebase. PMID:32486891

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  Mechanisms of Action of Autophagy Modulators Dissected by Quantitative Systems Pharmacology Analysis. PMID:32325894

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  Autophagy compensates for defects in mitochondrial dynamics. PMID:32191694

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  Rpn4 and proteasome-mediated yeast resistance to ethanol includes regulation of autophagy. PMID:32157425

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  AXL Targeting Abrogates Autophagic Flux and Induces Immunogenic Cell Death in Drug-Resistant Cancer Cells. PMID:32018052

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  Ubenimex induces autophagy inhibition and EMT suppression to overcome cisplatin resistance in GC cells by perturbing the CD13/EMP3/PI3K/AKT/NF-κB axis. PMID:31895687

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  Autophagy protein NRBF2 has reduced expression in Alzheimer's brains and modulates memory and amyloid-beta homeostasis in mice. PMID:31775806

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  Hypoxia-induced autophagy drives colorectal cancer initiation and progression by activating the PRKC/PKC-EZR (ezrin) pathway. PMID:31775562

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  ULK1 and ULK2 Regulate Stress Granule Disassembly Through Phosphorylation and Activation of VCP/p97. PMID:30979586

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  MSGP: the first database of the protein components of the mammalian stress granules. PMID:30820574

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  AutophagySMDB: a curated database of small molecules that modulate protein targets regulating autophagy. PMID:30669929

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  Inferring Novel Autophagy Regulators Based on Transcription Factors and Non-Coding RNAs Coordinated Regulatory Network. PMID:30400235

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  ATD: a comprehensive bioinformatics resource for deciphering the association of autophagy and diseases. PMID:30239683

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  What We Learned From Big Data for Autophagy Research. PMID:30175097

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  HAMdb: a database of human autophagy modulators with specific pathway and disease information. PMID:30066211

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  Exploring autophagy with Gene Ontology. PMID:29455577

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  Divergent N Deficiency-Dependent Senescence and Transcriptome Response in Developmentally Old and Young Brassica napus Leaves. PMID:29449851

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  Redox Regulation of Homeostasis and Proteostasis in Peroxisomes. PMID:29167332

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  THANATOS: an integrative data resource of proteins and post-translational modifications in the regulation of autophagy. PMID:29157087

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  Transcriptional variations in the wider peritumoral tissue environment of pancreatic cancer. PMID:28983920

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  The emergence of noncoding RNAs as Heracles in autophagy. PMID:28441084

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  Network analysis reveals crosstalk between autophagy genes and disease genes. PMID:28295050

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  VaProS: a database-integration approach for protein/genome information retrieval. PMID:28012137

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  Glioblastoma, hypoxia and autophagy: a survival-prone 'ménage-à-trois'. PMID:27787518

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  Guidelines for the use and interpretation of assays for monitoring autophagy (3rd edition). PMID:26799652

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  Lipid Geometry and Bilayer Curvature Modulate LC3/GABARAP-Mediated Model Autophagosomal Elongation. PMID:26789764

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  Autophagy Regulatory Network - a systems-level bioinformatics resource for studying the mechanism and regulation of autophagy. PMID:25635527

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  Potent effects of dioscin against obesity in mice. PMID:25609476

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  Proteomic analysis of the mitochondria from embryonic and postnatal rat brains reveals response to developmental changes in energy demands. PMID:25046836

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  A curated census of autophagy-modulating proteins and small molecules: candidate targets for cancer therapy. PMID:24906121

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  The ubiquitin proteasome system in Caenorhabditis elegans and its regulation. PMID:24563851

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  Regulation of autophagy by the Rab GTPase network. PMID:24440914

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  Autophagy has a key role in the pathophysiology of schizophrenia. PMID:24365867

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  Redox modification of proteins as essential mediators of CNS autophagy and mitophagy. PMID:23773928

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  Autophagy in immunity: implications in etiology of autoimmune/autoinflammatory diseases. PMID:22878595

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  miRDeathDB: a database bridging microRNAs and the programmed cell death. PMID:22743998
• http://nar.oxfordjournals.org/content/39/suppl_1/D991

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Tags

More detailed information about this field from each metasource. ×

human genes and diseases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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gene-, system- or disease-specific databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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autophagocytosis

metasource: re3data.org
version: re3data.org: Autophagy Database; editing status 2017-12-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3J786 last accessed: 2022-11-04

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cell death

metasource: re3data.org
version: re3data.org: Autophagy Database; editing status 2017-12-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3J786 last accessed: 2022-11-04

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cell protection

metasource: re3data.org
version: re3data.org: Autophagy Database; editing status 2017-12-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3J786 last accessed: 2022-11-04

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diseases

metasource: re3data.org
version: re3data.org: Autophagy Database; editing status 2017-12-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3J786 last accessed: 2022-11-04

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eukaryotes

metasource: re3data.org
version: re3data.org: Autophagy Database; editing status 2017-12-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3J786 last accessed: 2022-11-04

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lysosomal degradation pathway

metasource: re3data.org
version: re3data.org: Autophagy Database; editing status 2017-12-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3J786 last accessed: 2022-11-04

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macroautophagy

metasource: re3data.org
version: re3data.org: Autophagy Database; editing status 2017-12-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3J786 last accessed: 2022-11-04

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proteins

metasource: re3data.org
version: re3data.org: Autophagy Database; editing status 2017-12-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3J786 last accessed: 2022-11-04

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:34.231588

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self-digestion

metasource: re3data.org
version: re3data.org: Autophagy Database; editing status 2017-12-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3J786 last accessed: 2022-11-04

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structure analysis

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:34.231588

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sequence analysis

metasource: bio.tools
version: extracted_at: 2022-11-04T11:34:34.231588

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human genes and diseases gene-, system- or disease-specific autophagocytosis cell death cell protection diseases eukaryotes lysosomal degradation pathway macroautophagy proteins self-digestion structure analysis sequence analysis