R3023M last accessed: 2022-11-04

APD - Antimicrobial Peptide Database
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Other names: APD, APD - Antimicrobial Peptide Database

The Antimicrobial Peptide Database (APD) contains information on antimicrobial peptides from across a wide taxonomic range. It includes a glossary, nomenclature, classification, information search, prediction, design, and statistics of AMPs. The antimicrobial peptides in this database contain less than 100 amino acid residues, are in the mature and active form, and primarily from natural sources, ranging from bacteria, fungi, plants, to animals.

Webpage:

https://wangapd3.com/main.php

Licence:

Name: Public Domain
URL: http://aps.unmc.edu/AP/about.php

Publications:

Publications
More detailed information about this field from each metasource.

APD3: the antimicrobial peptide database as a tool for research and education
PMID: 26602694
metasource: Fairsharing.org
version: FAIRsharing.org: APD; Antimicrobial Peptide Database; DOI: https://doi.org/10.25504/FAIRsharing.ctwd7b; Last edited: June 25, 2021, 2:44 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

APD2: the updated antimicrobial peptide database and its application in peptide design
PMID: 18957441
metasource: Fairsharing.org
version: FAIRsharing.org: APD; Antimicrobial Peptide Database; DOI: https://doi.org/10.25504/FAIRsharing.ctwd7b; Last edited: June 25, 2021, 2:44 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

APD: the Antimicrobial Peptide Database
PMID: 14681488
metasource: Fairsharing.org
version: FAIRsharing.org: APD; Antimicrobial Peptide Database; DOI: https://doi.org/10.25504/FAIRsharing.ctwd7b; Last edited: June 25, 2021, 2:44 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

APD3: the antimicrobial peptide database as a tool for research and education PubMed citations: 545.

545 articles citing: APD3: the antimicrobial peptide database as a tool for research and education

Genomewide Analysis and Biological Characterization of Cathelicidins with Potent Antimicrobial Activity and Low Cytotoxicity from Three Bat Species. PMID:35892379
Lights and Shadows on the Therapeutic Use of Antimicrobial Peptides. PMID:35889455
Host's Immunity and Candida Species Associated with Denture Stomatitis: A Narrative Review. PMID:35889156
Antibacterial Peptide NP-6 Affects Staphylococcus aureus by Multiple Modes of Action. PMID:35887160
Mining Amphibian and Insect Transcriptomes for Antimicrobial Peptide Sequences with rAMPage. PMID:35884206
Emerging Computational Approaches for Antimicrobial Peptide Discovery. PMID:35884190
Scorpion Peptide Smp24 Exhibits a Potent Antitumor Effect on Human Lung Cancer Cells by Damaging the Membrane and Cytoskeleton In Vivo and In Vitro. PMID:35878176
Rational Discovery of Antimicrobial Peptides by Means of Artificial Intelligence. PMID:35877911
Functional Characterization, Antimicrobial Effects, and Potential Antibacterial Mechanisms of NpHM4, a Derived Peptide of Nautilus pompilius Hemocyanin. PMID:35877752
Bioinformatic Prediction and Characterization of Proteins in Porphyra dentata by Shotgun Proteomics. PMID:35873412
PTPAMP: prediction tool for plant-derived antimicrobial peptides. PMID:35864258
Design of a specific peptide against phenolic glycolipid-1 from Mycobacterium leprae and its implications in leprosy bacilli entry. PMID:35857971
Design and modification of frog skin peptide brevinin-1GHa with enhanced antimicrobial activity on Gram-positive bacterial strains. PMID:35852614
In silico identification of two peptides with antibacterial activity against multidrug-resistant Staphylococcus aureus. PMID:35835775
Host Defense Peptides at the Ocular Surface: Roles in Health and Major Diseases, and Therapeutic Potentials. PMID:35783647
Deep generative models for peptide design. PMID:35769205
Legume Plant Peptides as Sources of Novel Antimicrobial Molecules Against Human Pathogens. PMID:35755814
Identification and Characterization of a Potential Antimicrobial Peptide Isolated from Soil Brevibacillus sp. WUL10 and Its Activity against MRSA Pathogens. PMID:35736972
Antimicrobial Properties of a Peptide Derived from the Male Fertility Factor kl2 Protein of Drosophila melanogaster. PMID:35723299
Identification and Functional Characterization of Peptides With Antimicrobial Activity From the Syphilis Spirochete, Treponema pallidum. PMID:35722306
Recombinant human β-defensin130 inhibited the growth of foodborne bacteria through membrane disruption and exerted anti-inflammatory activity. PMID:35720462
Antimicrobial Peptide Analogs From Scorpions: Modifications and Structure-Activity. PMID:35712354
A database of anti-coronavirus peptides. PMID:35697698
Experimental demonstration of highly reliable dynamic memristor for artificial neuron and neuromorphic computing. PMID:35660724
In Vitro Activity of Peptide Antibiotics in Combination With Other Antimicrobials on Extensively Drug-Resistant Acinetobacter baumannii in the Planktonic and Biofilm Cell. PMID:35645826
PDAUG: a Galaxy based toolset for peptide library analysis, visualization, and machine learning modeling. PMID:35643441
In vitro and in vivo Activity of Phibilin Against Candida albicans. PMID:35633688
Influence of the Polysaccharide Capsule on the Bactericidal Activity of Indolicidin on Streptococcus pneumoniae. PMID:35633685
Development of Anticancer Peptides Using Artificial Intelligence and Combinational Therapy for Cancer Therapeutics. PMID:35631583
Amyloidogenic Peptides: New Class of Antimicrobial Peptides with the Novel Mechanism of Activity. PMID:35628272
Evolving and assembling to pierce through: Evolutionary and structural aspects of antimicrobial peptides. PMID:35615024
Machine Learning in Antibacterial Drug Design. PMID:35592425
i2APP: A Two-Step Machine Learning Framework For Antiparasitic Peptides Identification. PMID:35571057
The Role of Antimicrobial Peptides as Antimicrobial and Antibiofilm Agents in Tackling the Silent Pandemic of Antimicrobial Resistance. PMID:35566343
Structure-Activity Predictions From Computational Mining of Protein Databases to Assist Modular Design of Antimicrobial Peptides. PMID:35531270
Characterization of the structure-function relationship of a novel salt-resistant antimicrobial peptide, RR12. PMID:35517355
Editorial: Antimicrobial Peptides: Molecular Design, Structure-Function Relationship, and Biosynthesis Optimization. PMID:35495692
Probing the competitive inhibitor efficacy of frog-skin alpha helical AMPs identified against ACE2 binding to SARS-CoV-2 S1 spike protein as therapeutic scaffold to prevent COVID-19. PMID:35461388
Polymeric Coatings and Antimicrobial Peptides as Efficient Systems for Treating Implantable Medical Devices Associated-Infections. PMID:35458361
The Impacts of Lactiplantibacillus plantarum on the Functional Properties of Fermented Foods: A Review of Current Knowledge. PMID:35456875
Membrane Activity of LL-37 Derived Antimicrobial Peptides against Enterococcus hirae: Superiority of SAAP-148 over OP-145. PMID:35454112
Host Defence Peptides: A Potent Alternative to Combat Antimicrobial Resistance in the Era of the COVID-19 Pandemic. PMID:35453226
Engineering and Structural Insights of a Novel BBI-like Protease Inhibitor Livisin from the Frog Skin Secretion. PMID:35448882
A Cationic Amphipathic Tilapia Piscidin 4 Peptide-Based Antimicrobial Formulation Promotes Eradication of Bacterial Vaginosis-Associated Bacterial Biofilms. PMID:35444633
Targeting Multidrug Resistance With Antimicrobial Peptide-Decorated Nanoparticles and Polymers. PMID:35432230
Profiling hymenopteran venom toxins: Protein families, structural landscape, biological activities, and pharmacological benefits. PMID:35372826
Peptide Toxins as Biothreats and the Potential for AI Systems to Enhance Biosecurity. PMID:35356782
Traditional and Computational Screening of Non-Toxic Peptides and Approaches to Improving Selectivity. PMID:35337121
Novel Antimicrobial Peptides Designed Using a Recurrent Neural Network Reduce Mortality in Experimental Sepsis. PMID:35326874
Antimicrobial Peptides: From Design to Clinical Application. PMID:35326812
New Insights into the Toxin Diversity and Antimicrobial Activity of the "Fire Coral" Millepora complanata. PMID:35324703
Present status and future directions of intracanal medicaments. PMID:35322427
Extraction of antibacterial peptides against Helicobacter pylori from bovine milk casein. PMID:35316909
A review on antimicrobial peptides databases and the computational tools. PMID:35305010
Machine Learning Prediction of Antimicrobial Peptides. PMID:35298806
Using Clustered Regularly Interspaced Short Palindromic Repeats for Recombinant Biosynthesis of Antimicrobial Peptides as Anti-COVID-19 Agents. PMID:35295932
Rewiring host-microbe interactions and barrier function during gastrointestinal inflammation. PMID:35291443
Heterogeneous-Backbone Proteomimetic Analogues of Lasiocepsin, a Disulfide-Rich Antimicrobial Peptide with a Compact Tertiary Fold. PMID:35290019
A Novel Antimicrobial Peptide Derived from Bony Fish IFN1 Exerts Potent Antimicrobial and Anti-Inflammatory Activity in Mammals. PMID:35289673
Design of Oligourea-Based Foldamers with Antibacterial and Antifungal Activities. PMID:35268850
Discovery of antimicrobials by massively parallelized growth assays (Mex). PMID:35260685
Identification of antimicrobial peptides from the human gut microbiome using deep learning. PMID:35241840
HPV infection alters vaginal microbiome through down-regulating host mucosal innate peptides used by Lactobacilli as amino acid sources. PMID:35228537
Antioxidant and Antimicrobial Peptides Derived from Food Proteins. PMID:35209132
Unraveling the Uncharacterized Domain of Carocin S2: A Ribonuclease Pectobacterium carotovorum subsp. carotovorum Bacteriocin. PMID:35208813
Design of Membrane Active Peptides Considering Multi-Objective Optimization for Biomedical Application. PMID:35207101
Antimicrobial Potential of the Genera Geobacillus and Parageobacillus, as Well as Endolysins Biosynthesized by Their Bacteriophages. PMID:35203843
A novel antimicrobial peptide derived from human BPIFA1 protein protects against Candida albicans infection. PMID:35201913
Unveiling the genomic potential of Pseudomonas type strains for discovering new natural products. PMID:35195510
Identification of Distinct Characteristics of Antibiofilm Peptides and Prospection of Diverse Sources for Efficacious Sequences. PMID:35185814
Unifying the classification of antimicrobial peptides in the antimicrobial peptide database. PMID:35168785
Drug Delivery Systems for the Oral Administration of Antimicrobial Peptides: Promising Tools to Treat Infectious Diseases. PMID:35146486
Multiple roles of ribosomal antimicrobial peptides in tackling global antimicrobial resistance. PMID:35116161
The Potential of Modified and Multimeric Antimicrobial Peptide Materials as Superbug Killers. PMID:35083194
AMPlify: attentive deep learning model for discovery of novel antimicrobial peptides effective against WHO priority pathogens. PMID:35078402
Development of Disease-Resistance-Associated Microsatellite DNA Markers for Selective Breeding of Tilapia (Oreochromis spp.) Farmed in Taiwan. PMID:35052439
Antifungal Polymeric Materials and Nanocomposites. PMID:35004642
Viral Prefusion Targeting Using Entry Inhibitor Peptides: The Case of SARS-CoV-2 and Influenza A virus. PMID:35002586
Amaranthus hypochondriacus seeds as a rich source of cysteine rich bioactive peptides. PMID:34995961
A Multiplexed Cell-Free Assay to Screen for Antimicrobial Peptides in Double Emulsion Droplets. PMID:34989471
Identification of Antimicrobial Peptides Isolated From the Skin Mucus of African Catfish, Clarias gariepinus (Burchell, 1822). PMID:34987491
In Vitro Evaluation of Antimicrobial Peptides from the Black Soldier Fly (Hermetia Illucens) against a Selection of Human Pathogens. PMID:34985302
AMPing Up the Search: A Structural and Functional Repository of Antimicrobial Peptides for Biofilm Studies, and a Case Study of Its Application to Corynebacterium striatum, an Emerging Pathogen. PMID:34976872
Stapled Anoplin as an Antibacterial Agent. PMID:34966367
Rational Designed Hybrid Peptides Show up to a 6-Fold Increase in Antimicrobial Activity and Demonstrate Different Ultrastructural Changes as the Parental Peptides Measured by BioSAXS. PMID:34966279
Structure and Activity of a Selective Antibiofilm Peptide SK-24 Derived from the NMR Structure of Human Cathelicidin LL-37. PMID:34959645
Antifungal Peptides and Proteins to Control Toxigenic Fungi and Mycotoxin Biosynthesis. PMID:34948059
How to Combat Gram-Negative Bacteria Using Antimicrobial Peptides: A Challenge or an Unattainable Goal? PMID:34943713
MultiPep: a hierarchical deep learning approach for multi-label classification of peptide bioactivities. PMID:34909478
Effect of human secretory calcium-binding phosphoprotein proline-glutamine rich 1 protein on Porphyromonas gingivalis and identification of its active portions. PMID:34887426
Putative Antimicrobial Peptides Within Bacterial Proteomes Affect Bacterial Predominance: A Network Analysis Perspective. PMID:34867874
Ab initio Designed Antimicrobial Peptides Against Gram-Negative Bacteria. PMID:34867843
Anti-breast cancer synthetic peptides derived from the Anabas testudineus skin mucus fractions. PMID:34848729
Nanotechnology-Based Delivery Systems for Antimicrobial Peptides. PMID:34834210
A Novel Deoxynivalenol-Activated Wheat Arl6ip4 Gene Encodes an Antifungal Peptide with Deoxynivalenol Affinity and Protects Plants against Fusarium Pathogens and Mycotoxins. PMID:34829228
Antihypertensive Peptides from Ultrafiltration and Fermentation of the Ricotta Cheese Exhausted Whey: Design and Characterization of a Functional Ricotta Cheese. PMID:34828854
The Methods of Digging for "Gold" within the Salt: Characterization of Halophilic Prokaryotes and Identification of Their Valuable Biological Products Using Sequencing and Genome Mining Tools. PMID:34828362
AI4AMP: an Antimicrobial Peptide Predictor Using Physicochemical Property-Based Encoding Method and Deep Learning. PMID:34783578
Assessment of in vitro activities of novel modified antimicrobial peptides against clarithromycin resistant Mycobacterium abscessus. PMID:34780520
Antimicrobial Peptides: An Update on Classifications and Databases. PMID:34769122
The Trp-rich Antimicrobial Amphiphiles With Intramolecular Aromatic Interactions for the Treatment of Bacterial Infection. PMID:34721331
Synthetic Oligopeptides Mimicking γ-Core Regions of Cysteine-Rich Peptides of Solanum lycopersicum Possess Antimicrobial Activity against Human and Plant Pathogens. PMID:34698084
A Novel Antimicrobial Peptide Sparamosin26-54 From the Mud Crab Scylla paramamosain Showing Potent Antifungal Activity Against Cryptococcus neoformans. PMID:34690992
Peptides-based therapeutics: Emerging potential therapeutic agents for COVID-19. PMID:34689960
Mechanistic Understanding from Molecular Dynamics in Pharmaceutical Research 2: Lipid Membrane in Drug Design. PMID:34681286
Discovery, Optimization, and Clinical Application of Natural Antimicrobial Peptides. PMID:34680498
PepVAE: Variational Autoencoder Framework for Antimicrobial Peptide Generation and Activity Prediction. PMID:34659152
Novel Antimicrobial Peptides from a Cecropin-Like Region of Heteroscorpine-1 from Heterometrus laoticus Venom with Membrane Disruption Activity. PMID:34641415
Antimicrobial peptides as a feed additive alternative to animal production, food safety and public health implications: An overview. PMID:34632120
Distribution of bacteriocin genes in the lineages of Lactiplantibacillus plantarum. PMID:34625657
PredAPP: Predicting Anti-Parasitic Peptides with Undersampling and Ensemble Approaches. PMID:34608613
Comparative analysis of machine learning-based approaches for identifying therapeutic peptides targeting SARS-CoV-2. PMID:34595489
Membrane-disruptive peptides/peptidomimetics-based therapeutics: Promising systems to combat bacteria and cancer in the drug-resistant era. PMID:34589385
Marine Transcriptomics Analysis for the Identification of New Antimicrobial Peptides. PMID:34564152
The evolution of the antimicrobial peptide database over 18 years: Milestones and new features. PMID:34529321
The Antimicrobial Peptide MK58911-NH2 Acts on Planktonic, Biofilm, and Intramacrophage Cells of Cryptococcus neoformans. PMID:34516241
Identification of Genes Encoding Antimicrobial Proteins in Langerhans Cells. PMID:34512625
Identification and Characterization of Antimicrobial Peptides From Butterflies: An Integrated Bioinformatics and Experimental Study. PMID:34512599
Discovery of a Natural Product with Potent Efficacy Against SARS-CoV-2 by Drug Screening. PMID:34510373
Taxonomic bias in AMP prediction of invertebrate peptides. PMID:34504226
Peptipedia: a user-friendly web application and a comprehensive database for peptide research supported by Machine Learning approach. PMID:34478499
Characterisation of Antiviral Activity of Cathelicidins from Naked Mole Rat and Python bivittatus on Human Herpes Simplex Virus 1. PMID:34451812
Too Hot to Handle: Antibacterial Peptides Identified in Ghost Pepper. PMID:34445876
The Role of Antimicrobial Peptides in Preterm Birth. PMID:34445608
Antimicrobial Peptides from Plants: A cDNA-Library Based Isolation, Purification, Characterization Approach and Elucidating Their Modes of Action. PMID:34445412
Gran1: A Granulysin-Derived Peptide with Potent Activity against Intracellular Mycobacterium tuberculosis. PMID:34445098
Large-Scale Plasma Peptidomic Profiling Reveals a Novel, Nontoxic, Crassostrea hongkongensis-Derived Antimicrobial Peptide against Foodborne Pathogens. PMID:34436258
Bacterial surface properties influence the activity of the TAT-RasGAP317-326 antimicrobial peptide. PMID:34430812
Mechanism of Anti-Inflammatory Activity of TLR4-Interacting SPA4 Peptide. PMID:34429343
APPTEST is a novel protocol for the automatic prediction of peptide tertiary structures. PMID:34396417
DRAMP 3.0: an enhanced comprehensive data repository of antimicrobial peptides. PMID:34390348
New Insect Host Defense Peptides (HDP) From Dung Beetle (Coleoptera: Scarabaeidae) Transcriptomes. PMID:34374763
Machine learning screening of bile acid-binding peptides in a peptide database derived from food proteins. PMID:34373503
CpACpP: In Silico Cell-Penetrating Anticancer Peptide Prediction Using a Novel Bioinformatics Framework. PMID:34368571
Selective Antifungal Activity and Fungal Biofilm Inhibition of Tryptophan Center Symmetrical Short Peptide. PMID:34360998
PhytoAFP: In Silico Approaches for Designing Plant-Derived Antifungal Peptides. PMID:34356736
Activity of Anti-Microbial Peptides (AMPs) against Leishmania and Other Parasites: An Overview. PMID:34356608
Machine learning designs non-hemolytic antimicrobial peptides. PMID:34349895
Bacteriocins Produced by LAB Isolated from Cheeses within the Period 2009-2021: a Review. PMID:34342858
Phage-encoded cationic antimicrobial peptide required for lysis. PMID:34339297
In-silico study of peptide-protein interaction of antimicrobial peptides potentially targeting SARS and SARS-CoV-2 nucleocapsid protein. PMID:34336545
Fine-Tuning of Alkaline Residues on the Hydrophilic Face Provides a Non-toxic Cationic α-Helical Antimicrobial Peptide Against Antibiotic-Resistant ESKAPE Pathogens. PMID:34335511
Antimicrobial Peptides: Novel Source and Biological Function With a Special Focus on Entomopathogenic Nematode/Bacterium Symbiotic Complex. PMID:34335484
Co-AMPpred for in silico-aided predictions of antimicrobial peptides by integrating composition-based features. PMID:34330209
ENNAVIA is a novel method which employs neural networks for antiviral and anti-coronavirus activity prediction for therapeutic peptides. PMID:34297817
MS/MS analysis of four scorpion venoms from Colombia: a descriptive approach. PMID:34290759
Characterising four Sarconesiopsis magellanica (Diptera: Calliphoridae) larval fat body-derived antimicrobial peptides. PMID:34287503
Significance of Endogenous Antimicrobial Peptides on the Health of Food Animals. PMID:34262957
Biosynthesis of a Novel Antibacterial Dipeptide, Using Proteases From South American Native Fruits, Useful as a Food Preservative. PMID:34262924
Antimicrobial Peptides Derived From Insects Offer a Novel Therapeutic Option to Combat Biofilm: A Review. PMID:34248873
Antimicrobial Peptides and Proteins: From Nature's Reservoir to the Laboratory and Beyond. PMID:34222199
Zn-Enhanced Asp-Rich Antimicrobial Peptides: N-Terminal Coordination by Zn(II) and Cu(II), Which Distinguishes Cu(II) Binding to Different Peptides. PMID:34203496
Immunomodulatory Properties of Host Defence Peptides in Skin Wound Healing. PMID:34203393
Comparison of a Short Linear Antimicrobial Peptide with Its Disulfide-Cyclized and Cyclotide-Grafted Variants against Clinically Relevant Pathogens. PMID:34201398
Optimization of the antifungal metabolite production in Streptomyces libani isolated from northern forests soils in Iran. PMID:34195456
Identification of subtypes of anticancer peptides based on sequential features and physicochemical properties. PMID:34193950
The cellular architecture of the antimicrobial response network in human leprosy granulomas. PMID:34168371
Analysis of Antimicrobial Peptide Metabolome of Bacterial Endophyte Isolated From Traditionally Used Medicinal Plant Millettia pachycarpa Benth. PMID:34149644
Acute Experimental Barrier Injury Triggers Ulcerative Colitis-Specific Innate Hyperresponsiveness and Ulcerative Colitis-Type Microbiome Changes in Humans. PMID:34118489
Mining of Gram-Negative Surface-Active Enzybiotic Candidates by Sequence-Based Calculation of Physicochemical Properties. PMID:34113327
BING, a novel antimicrobial peptide isolated from Japanese medaka plasma, targets bacterial envelope stress response by suppressing cpxR expression. PMID:34108601
A Novel Antimicrobial Peptides From Pine Needles of Pinus densiflora Sieb. et Zucc. Against Foodborne Bacteria. PMID:34093476
Membrane partitioning and lipid selectivity of the N-terminal amphipathic H0 helices of endophilin isoforms. PMID:34090873
Prediction of Anticancer Peptides with High Efficacy and Low Toxicity by Hybrid Model Based on 3D Structure of Peptides. PMID:34073203
Utilizing Red Spotted Apollo Butterfly Transcriptome to Identify Antimicrobial Peptide Candidates against Porphyromonas gingivalis. PMID:34069966
Incorporating support vector machine with sequential minimal optimization to identify anticancer peptides. PMID:34051755
Auxiliary rapid identification of pathogenic and antagonistic microorganisms associated with Coptis chinensis root rot by high-throughput sequencing. PMID:34045546
The multifaceted nature of antimicrobial peptides: current synthetic chemistry approaches and future directions. PMID:34042120
Review of antiviral peptides for use against zoonotic and selected non-zoonotic viruses. PMID:34000327
In silico Approaches for the Design and Optimization of Interfering Peptides Against Protein-Protein Interactions. PMID:33996914
Using an Ensemble to Identify and Classify Macroalgae Antimicrobial Peptides. PMID:33978916
Molecular characterization of a novel β-defensin isoform from the red-toothed trigger fish, Odonus niger (Ruppel, 1836). PMID:33978838
Combining genetic algorithm with machine learning strategies for designing potent antimicrobial peptides. PMID:33975547
Amino Acid Reduction Can Help to Improve the Identification of Antimicrobial Peptides and Their Functional Activities. PMID:33959153
Genomic analysis of novel Yarrowia-like yeast symbionts associated with the carrion-feeding burying beetle Nicrophorus vespilloides. PMID:33941076
Promising role of defensins peptides as therapeutics to combat against viral infection. PMID:33933603
An Overview of Biological and Computational Methods for Designing Mechanism-Informed Anti-biofilm Agents. PMID:33927701
Peptides to Tackle Leishmaniasis: Current Status and Future Directions. PMID:33922379
In Silico Selection and Evaluation of Pugnins with Antibacterial and Anticancer Activity Using Skin Transcriptome of Treefrog (Boana pugnax). PMID:33919639
Membrane-Interacting Antifungal Peptides. PMID:33912564
Anaerobic gut fungi are an untapped reservoir of natural products. PMID:33906945
Nanogels: A novel approach in antimicrobial delivery systems and antimicrobial coatings. PMID:33898869
Antiviral peptides from aquatic organisms: Functionality and potential inhibitory effect on SARS-CoV-2. PMID:33883784
The rumen eukaryotome is a source of novel antimicrobial peptides with therapeutic potential. PMID:33832427
Deep Learning for Novel Antimicrobial Peptide Design. PMID:33810011
Prediction and Activity of a Cationic α-Helix Antimicrobial Peptide ZM-804 from Maize. PMID:33807972
Insights into the Action Mechanism of the Antimicrobial Peptide Lasioglossin III. PMID:33799744
The Antimicrobial Peptide Melectin Shows Both Antimicrobial and Antitumor Activity via Membrane Interference and DNA Binding. PMID:33776423
Applications of Discrete Synthetic Macromolecules in Life and Materials Science: Recent and Future Trends. PMID:33747749
Artificial Intelligence for COVID-19 Drug Discovery and Vaccine Development. PMID:33733182
Bioactive Molecules From Native Mexican Avocado Fruit (Persea americana var. drymifolia): A Review. PMID:33704631
Modeling novel Anti-Viral peptides (AVPs) with in-silico docking simulations against corona virus. PMID:33680868
Attacins: A Promising Class of Insect Antimicrobial Peptides. PMID:33672685
Recent Advances in Small Peptides of Marine Origin in Cancer Therapy. PMID:33669851
Identification of LINC00665-miR-let-7b-CCNA2 competing endogenous RNA network associated with prognosis of lung adenocarcinoma. PMID:33627711
Multiple Classes of Antimicrobial Peptides in Amaranthus tricolor Revealed by Prediction, Proteomics, and Mass Spectrometric Characterization. PMID:33576231
Tuning of a Membrane-Perforating Antimicrobial Peptide to Selectively Target Membranes of Different Lipid Composition. PMID:33564914
Sorting out the Superbugs: Potential of Sortase A Inhibitors among Other Antimicrobial Strategies to Tackle the Problem of Antibiotic Resistance. PMID:33562778
Delving Into the Origin of Destructive Inflammation in COVID-19: A Betrayal of Natural Host Defense Peptides? PMID:33552069
Synthetic Biology and Computer-Based Frameworks for Antimicrobial Peptide Discovery. PMID:33538585
Manipulated bio antimicrobial peptides from probiotic bacteria as proposed drugs for COVID-19 disease. PMID:33521241
A proline rich protein from the gingival seal around teeth exhibits antimicrobial properties against Porphyromonas gingivalis. PMID:33504866
Identifying anti-coronavirus peptides by incorporating different negative datasets and imbalanced learning strategies. PMID:33497434
Molecular engineering of antimicrobial peptides: microbial targets, peptide motifs and translation opportunities. PMID:33495702
Ensemble-AMPPred: Robust AMP Prediction and Recognition Using the Ensemble Learning Method with a New Hybrid Feature for Differentiating AMPs. PMID:33494403
Carbapenem-Resistant Klebsiella pneumoniae Clinical Isolates: In Vivo Virulence Assessment in Galleria mellonella and Potential Therapeutics by Polycationic Oligoethyleneimine. PMID:33430101
Propedia: a database for protein-peptide identification based on a hybrid clustering algorithm. PMID:33388027
The Cytotoxicity of RNase-Derived Peptides. PMID:33375305
PACAP is a pathogen-inducible resident antimicrobial neuropeptide affording rapid and contextual molecular host defense of the brain. PMID:33372152
Investigating Active Learning and Meta-Learning for Iterative Peptide Design. PMID:33350829
New Putative Antimicrobial Candidates: In silico Design of Fish-Derived Antibacterial Peptide-Motifs. PMID:33344436
Natural Compounds With Antibacterial Activity Against Cronobacter spp. in Powdered Infant Formula: A Review. PMID:33330595
DRACP: a novel method for identification of anticancer peptides. PMID:33323099
Design and Characterisation of Inhibitory Peptides against Bleg1_2478, an Evolutionary Divergent B3 Metallo-β-lactamase. PMID:33316879
Antibacterial activity of human defensins against Staphylococcus aureus and Escherichia coli. PMID:33304659
Synthetic Peptide ΔM4-Induced Cell Death Associated with Cytoplasmic Membrane Disruption, Mitochondrial Dysfunction and Cell Cycle Arrest in Human Melanoma Cells. PMID:33276536
In Silico Discovery of Antimicrobial Peptides as an Alternative to Control SARS-CoV-2. PMID:33255849
Bacteriocins to Thwart Bacterial Resistance in Gram Negative Bacteria. PMID:33240239
Structural and Functional Enrichment Analyses for Antimicrobial Peptides. PMID:33233636
Isolation of Antimicrobial Genes from Oryza rufipogon Griff by Using a Bacillus subtilis Expression System with Potential Antimicrobial Activities. PMID:33218175
DPL: a comprehensive database on sequences, structures, sources and functions of peptide ligands. PMID:33216893
Interaction of synthetic antimicrobial peptides of the Hylin a1 family with models of eukaryotic structures: Zwitterionic membranes and DNA. PMID:33195825
Resistance Mechanisms to Antimicrobial Peptides in Gram-Positive Bacteria. PMID:33193264
Design of Photosensitizing Agents for Targeted Antimicrobial Photodynamic Therapy. PMID:33182751
Deciphering Novel Antimicrobial Peptides from the Transcriptome of Papilio xuthus. PMID:33182688
Antibiofilm Activity on Candida albicans and Mechanism of Action on Biomembrane Models of the Antimicrobial Peptide Ctn[15-34]. PMID:33172206
Bioinspired multifunctional adhesive system for next generation bio-additively designed dental restorations. PMID:33160267
Better understanding and prediction of antiviral peptides through primary and secondary structure feature importance. PMID:33159146
DBAASP v3: database of antimicrobial/cytotoxic activity and structure of peptides as a resource for development of new therapeutics. PMID:33151284
CancerGram: An Effective Classifier for Differentiating Anticancer from Antimicrobial Peptides. PMID:33142753
Identification of New Ocellatin Antimicrobial Peptides by cDNA Precursor Cloning in the Frame of This Family of Intriguing Peptides. PMID:33138046
Activity of five antimicrobial peptides against periodontal as well as non-periodontal pathogenic strains. PMID:33133417
Identification of New Antimicrobial Peptides from Mediterranean Medical Plant Charybdis pancration (Steinh.) Speta. PMID:33126631
Identification and Purification of Potential Bioactive Peptide of Moringa oleifera Seed Extracts. PMID:33120901
Hevein-Like Antimicrobial Peptides Wamps: Structure-Function Relationship in Antifungal Activity and Sensitization of Plant Pathogenic Fungi to Tebuconazole by WAMP-2-Derived Peptides. PMID:33114433
New Antibacterial Peptides from the Freshwater Mollusk Pomacea poeyana (Pilsbry, 1927). PMID:33113998
Aggregation State of Synergistic Antimicrobial Peptides. PMID:33108730
Spotlight on the Selected New Antimicrobial Innate Immune Peptides Discovered During 2015-2019. PMID:33092508
Respiratory ß-2-Microglobulin exerts pH dependent antimicrobial activity. PMID:33092477
Immunological Aspects of Chytridiomycosis. PMID:33086692
Alternative Anti-Infective Treatments to Traditional Antibiotherapy against Staphylococcal Veterinary Pathogens. PMID:33076497
Molecular and Biological Properties of Snakins: The Foremost Cysteine-Rich Plant Host Defense Peptides. PMID:33053707
Repurposing a peptide toxin from wasp venom into antiinfectives with dual antimicrobial and immunomodulatory properties. PMID:33046640
Implementation of Microfluidics for Antimicrobial Susceptibility Assays: Issues and Optimization Requirements. PMID:33042872
Hybrid Antimicrobial Peptide Targeting Staphylococcus aureus and Displaying Anti-infective Activity in a Murine Model. PMID:33042031
A bioinformatic study of antimicrobial peptides identified in the Black Soldier Fly (BSF) Hermetia illucens (Diptera: Stratiomyidae). PMID:33037295
Transcriptome Analysis of Psacothea hilaris: De Novo Assembly and Antimicrobial Peptide Prediction. PMID:33027983
The Best Peptidomimetic Strategies to Undercover Antibacterial Peptides. PMID:33027928
Machine learning-guided discovery and design of non-hemolytic peptides. PMID:33024236
Discovery of Novel Type II Bacteriocins Using a New High-Dimensional Bioinformatic Algorithm. PMID:33013838
In Silico, Molecular Docking and In Vitro Antimicrobial Activity of the Major Rapeseed Seed Storage Proteins. PMID:33013372
Sequence Permutation Generates Peptides with Different Antimicrobial and Antibiofilm Activities. PMID:32992772
The Hirudo Medicinalis Microbiome Is a Source of New Antimicrobial Peptides. PMID:32992666
Antimicrobial Peptides as Potential Antiviral Factors in Insect Antiviral Immune Response. PMID:32983149
A Safe and Multitasking Antimicrobial Decapeptide: The Road from De Novo Design to Structural and Functional Characterization. PMID:32971824
Designed Antimicrobial Peptides Against Trauma-Related Cutaneous Invasive Fungal Wound Infections. PMID:32971819
Figainin 1, a Novel Amphibian Skin Peptide with Antimicrobial and Antiproliferative Properties. PMID:32967114
Plant Antimicrobial Peptides: State of the Art, In Silico Prediction and Perspectives in the Omics Era. PMID:32952397
Peptides with Dual Antimicrobial-Anticancer Activity: Strategies to Overcome Peptide Limitations and Rational Design of Anticancer Peptides. PMID:32947811
Morphing of Amphipathic Helices to Explore the Activity and Selectivity of Membranolytic Antimicrobial Peptides. PMID:32936629
Functional Characterization of Temporin-SHe, a New Broad-Spectrum Antibacterial and Leishmanicidal Temporin-SH Paralog from the Sahara Frog (Pelophylax saharicus). PMID:32933215
Antimicrobial peptides - Advances in development of therapeutic applications. PMID:32931796
Leveraging orthogonal mass spectrometry based strategies for comprehensive sequencing and characterization of ribosomal antimicrobial peptide natural products. PMID:32929442
Immunity in salamander regeneration: Where are we standing and where are we headed? PMID:32924213
Broad-Spectrum Antiviral Entry Inhibition by Interfacially Active Peptides. PMID:32907984
Variational Autoencoder for Generation of Antimicrobial Peptides. PMID:32875208
Exploring the Diversity of Cysteine-Rich Natural Product Peptides via MS/MS Fingerprint Ions. PMID:32872784
Extension of the Shelf-Life of Fresh Pasta Using Chickpea Flour Fermented with Selected Lactic Acid Bacteria. PMID:32872647
Overview of Global Trends in Classification, Methods of Preparation and Application of Bacteriocins. PMID:32872235
A Novel Peptide Antibiotic, Pro10-1D, Designed from Insect Defensin Shows Antibacterial and Anti-Inflammatory Activities in Sepsis Models. PMID:32867384
ACEP: improving antimicrobial peptides recognition through automatic feature fusion and amino acid embedding. PMID:32859150
A Novel Antimicrobial Peptide Scyreprocin From Mud Crab Scylla paramamosain Showing Potent Antifungal and Anti-biofilm Activity. PMID:32849331
In-Depth In Silico Search for Cuttlefish (Sepia officinalis) Antimicrobial Peptides Following Bacterial Challenge of Haemocytes. PMID:32847054
LAMP2: a major update of the database linking antimicrobial peptides. PMID:32844169
Two Tachykinin-Related Peptides with Antimicrobial Activity Isolated from Triatoma infestans Hemolymph. PMID:32843839
Dissolvable Microneedles Coupled with Nanofiber Dressings Eradicate Biofilms via Effectively Delivering a Database-Designed Antimicrobial Peptide. PMID:32840361
Antimicrobial Peptides of Salmonid Fish: From Form to Function. PMID:32824728
The Potential of Antimicrobial Peptides as an Antiviral Therapy against COVID-19. PMID:32821884
Potential chimeric peptides to block the SARS-CoV-2 spike receptor-binding domain. PMID:32802318
Design, Engineering and Discovery of Novel α-Helical and β-Boomerang Antimicrobial Peptides against Drug Resistant Bacteria. PMID:32796755
Bioinformatic Analysis of 1000 Amphibian Antimicrobial Peptides Uncovers Multiple Length-Dependent Correlations for Peptide Design and Prediction. PMID:32784626
Modification and Targeted Design of N-Terminal Truncates Derived from Brevinin with Improved Therapeutic Efficacy. PMID:32781587
The Spectrum of Design Solutions for Improving the Activity-Selectivity Product of Peptide Antibiotics against Multidrug-Resistant Bacteria and Prostate Cancer PC-3 Cells. PMID:32752241
Proteo-Transcriptomic Analysis Identifies Potential Novel Toxins Secreted by the Predatory, Prey-Piercing Ribbon Worm Amphiporus lactifloreus. PMID:32752210
Mechanisms Protecting Acinetobacter baumannii against Multiple Stresses Triggered by the Host Immune Response, Antibiotics and Outside-Host Environment. PMID:32752093
Antimicrobial Activity of Small Synthetic Peptides Based on the Marine Peptide Turgencin A: Prediction of Antimicrobial Peptide Sequences in a Natural Peptide and Strategy for Optimization of Potency. PMID:32751755
Transcriptome profiling and in silico detection of the antimicrobial peptides of red king crab Paralithodes camtschaticus. PMID:32728087
In silico identification and functional validation of linear cationic α-helical antimicrobial peptides in the ascidian Ciona intestinalis. PMID:32724213
Two distinct amphipathic peptide antibiotics with systemic efficacy. PMID:32723829
Insights into the skin of caecilian amphibians from gene expression profiles. PMID:32718305
Anti-cancer peptides: classification, mechanism of action, reconstruction and modification. PMID:32692959
Lactoferrin-Derived Peptide Lactofungin Is Potently Synergistic with Amphotericin B. PMID:32690642
Molecular Characterization of a Novel Lytic Enzyme LysC from Clostridium intestinale URNW and Its Antibacterial Activity Mediated by Positively Charged N-Terminal Extension. PMID:32664473
Diversity of Oligopeptide Transport in Yeast and Its Impact on Adaptation to Winemaking Conditions. PMID:32587604
ACD: Antimicrobial chemotherapeutics database. PMID:32584882
Proteomics of Galápagos Marine Iguanas Links Function of Femoral Gland Proteins to the Immune System. PMID:32581039
Antimicrobial Peptides as Anticancer Agents: Functional Properties and Biological Activities. PMID:32575664
Antifungal symbiotic peptide NCR044 exhibits unique structure and multifaceted mechanisms of action that confer plant protection. PMID:32571919
Proteomic Screening for Prediction and Design of Antimicrobial Peptides with AmpGram. PMID:32560350
Strategies in Translating the Therapeutic Potentials of Host Defense Peptides. PMID:32528474
Circumventing colistin resistance by combining colistin and antimicrobial peptides to kill colistin-resistant and multidrug-resistant Gram-negative bacteria. PMID:32512236
Utilizing Organoid and Air-Liquid Interface Models as a Screening Method in the Development of New Host Defense Peptides. PMID:32509598
Mitigation of peri-implantitis by rational design of bifunctional peptides with antimicrobial properties. PMID:32467858
The Role and Potential Application of Antimicrobial Peptides in Autoimmune Diseases. PMID:32457759
Antimicrobials from Venomous Animals: An Overview. PMID:32455792
Biological Properties of a Novel Multifunctional Host Defense Peptide from the Skin Secretion of the Chaco Tree Frog, Boana raniceps. PMID:32443921
Antifungal Activity of Antimicrobial Peptides and Proteins against Aspergillus fumigatus. PMID:32443413
Efficient flow synthesis of human antimicrobial peptides. PMID:32431323
Lactobacillus acidophilus Membrane Vesicles as a Vehicle of Bacteriocin Delivery. PMID:32425905
ABC Transporter DerAB of Lactobacillus casei Mediates Resistance against Insect-Derived Defensins. PMID:32414796
Antimicrobial peptides: Application informed by evolution. PMID:32355003
Bacteriocins, Antimicrobial Peptides from Bacterial Origin: Overview of Their Biology and Their Impact against Multidrug-Resistant Bacteria. PMID:32349409
Antimicrobial Peptides as Probes in Biosensors Detecting Whole Bacteria: A Review. PMID:32344585
Are Antimicrobial Peptide Dendrimers an Escape from ESKAPE? PMID:32320368
Human Antimicrobial Peptide Hepcidin 25-Induced Apoptosis in Candida albicans. PMID:32316661
Comprehensive transcriptional changes in the liver of Kanglang white minnow (Anabarilius grahami) in response to the infection of parasite Ichthyophthirius multifiliis. PMID:32295151
Therapeutics and delivery vehicles for local treatment of osteomyelitis. PMID:32285973
BIPEP: Sequence-based Prediction of Biofilm Inhibitory Peptides Using a Combination of NMR and Physicochemical Descriptors. PMID:32280870
Antifungal Peptides as Therapeutic Agents. PMID:32257965
The First Genome Survey of the Antarctic Krill (Euphausia superba) Provides a Valuable Genetic Resource for Polar Biomedical Research. PMID:32244466
Synthetic molecular evolution of host cell-compatible, antimicrobial peptides effective against drug-resistant, biofilm-forming bacteria. PMID:32241895
Insilico Alpha-Helical Structural Recognition of Temporin Antimicrobial Peptides and Its Interactions with Middle East Respiratory Syndrome-Coronavirus. PMID:32206049
Opossum Cathelicidins Exhibit Antimicrobial Activity Against a Broad Spectrum of Pathogens Including West Nile Virus. PMID:32194564
Proteomic Adaptation of Streptococcus pneumoniae to the Human Antimicrobial Peptide LL-37. PMID:32183275
Differential Abilities of Mammalian Cathelicidins to Inhibit Bacterial Biofilm Formation and Promote Multifaceted Immune Functions of Neutrophils. PMID:32182913
Antifungal Activity of Anionic Defense Peptides: Insight into the Action of Galleria mellonella Anionic Peptide 2. PMID:32168818
Effect of helical kink in antimicrobial peptides on membrane pore formation. PMID:32167466
Development and Characterization of the Shortest Anti-Adhesion Peptide Analogue of B49Mod1. PMID:32155736
In vitro and intracellular activities of frog skin temporins against Legionella pneumophila and its eukaryotic hosts. PMID:32132569
Antimicrobial host defence peptides: functions and clinical potential. PMID:32107480
Hemoglobin Reassembly of Antimicrobial Fragments from the Midgut of Triatoma infestans. PMID:32050591
PlantPepDB: A manually curated plant peptide database. PMID:32042035
Computer-Aided Design of Antimicrobial Peptides: Are We Generating Effective Drug Candidates? PMID:32038544
Characterization and Identification of Natural Antimicrobial Peptides on Different Organisms. PMID:32024233
Antimicrobial resistance in livestock: antimicrobial peptides provide a new solution for a growing challenge. PMID:32002215
Comparing Cathelicidin Susceptibility of the Meningitis Pathogens Streptococcus suis and Escherichia coli in Culture Medium in Contrast to Porcine or Human Cerebrospinal Fluid. PMID:31993024
The OPR Protein MTHI1 Controls the Expression of Two Different Subunits of ATP Synthase CFo in Chlamydomonas reinhardtii. PMID:31988263
Development and Challenges of Antimicrobial Peptides for Therapeutic Applications. PMID:31941022
Mechanisms of Action for Antimicrobial Peptides With Antibacterial and Antibiofilm Functions. PMID:31921046
Antibacterial and Antibiofilm Activity of Temporin-GHc and Temporin-GHd Against Cariogenic Bacteria, Streptococcus mutans. PMID:31921036
The antimicrobial activity of protein elicitor AMEP412 against Streptomyces scabiei. PMID:31912374
In Vitro and MD Simulation Study to Explore Physicochemical Parameters for Antibacterial Peptide to Become Potent Anticancer Peptide. PMID:31909181
Characterization of the Jumbo Squid (Dosidicus gigas) Skin By-Product by Shotgun Proteomics and Protein-Based Bioinformatics. PMID:31905758
High-Throughput Identification of Putative Antimicrobial Peptides from Multi-Omics Data of the Lined Seahorse (Hippocampus erectus). PMID:31905755
BioDADPep: A Bioinformatics database for anti diabetic peptides. PMID:31902976
Antifungal Activity and Physicochemical Properties of a Novel Antimicrobial Protein AMP-17 from Musca domestica. PMID:31880884
Expression and Function of Host Defense Peptides at Inflammation Sites. PMID:31877866
Antimicrobial peptide identification using multi-scale convolutional network. PMID:31870282
Host-Microbe Interactions in the Chemosynthetic Riftia pachyptila Symbiosis. PMID:31848270
BIOPEP-UWM Database of Bioactive Peptides: Current Opportunities. PMID:31783634
Insect Cecropins, Antimicrobial Peptides with Potential Therapeutic Applications. PMID:31766730
ADAPTABLE: a comprehensive web platform of antimicrobial peptides tailored to the user's research. PMID:31740563
The origin and evolution of cell-intrinsic antibacterial defenses in eukaryotes. PMID:31731216
Microcins in Enterobacteriaceae: Peptide Antimicrobials in the Eco-Active Intestinal Chemosphere. PMID:31649628
The antimicrobial peptide PFR induces necroptosis mediated by ER stress and elevated cytoplasmic calcium and mitochondrial ROS levels: cooperation with Ara-C to act against acute myeloid leukemia. PMID:31637016
Antimicrobial peptides: new hope in the war against multidrug resistance. PMID:31592585
Integrated evolutionary analysis reveals antimicrobial peptides with limited resistance. PMID:31586049
Computational screening of antimicrobial peptides for Acinetobacter baumannii. PMID:31577808
Natural Occurrence in Venomous Arthropods of Antimicrobial Peptides Active against Protozoan Parasites. PMID:31557900
Chemical and Biological Characteristics of Antimicrobial α-Helical Peptides Found in Solitary Wasp Venoms and Their Interactions with Model Membranes. PMID:31554187
Insight into the Antifungal Mechanism of Action of Human RNase N-terminus Derived Peptides. PMID:31540052
Distinct gut metagenomics and metaproteomics signatures in prediabetics and treatment-naïve type 2 diabetics. PMID:31492563
The Komodo dragon (Varanus komodoensis) genome and identification of innate immunity genes and clusters. PMID:31470795
Worms' Antimicrobial Peptides. PMID:31470685
DRAMP 2.0, an updated data repository of antimicrobial peptides. PMID:31409791
Antiviral Activities of Human Host Defense Peptides. PMID:31385762
FeptideDB: A web application for new bioactive peptides from food protein. PMID:31372542
AtbPpred: A Robust Sequence-Based Prediction of Anti-Tubercular Peptides Using Extremely Randomized Trees. PMID:31372196
Spontaneous and Stress-Induced Pore Formation in Membranes: Theory, Experiments and Simulations. PMID:31363808
The antimicrobial peptide database provides a platform for decoding the design principles of naturally occurring antimicrobial peptides. PMID:31361941
Preclinical studies of toxicity and safety of the AS-48 bacteriocin. PMID:31360546
Peptide-Protein Interaction Studies of Antimicrobial Peptides Targeting Middle East Respiratory Syndrome Coronavirus Spike Protein: An In Silico Approach. PMID:31354813
Antioxidant activities and protective effects of duck embryo peptides against H2O2-induced oxidative damage in HepG2 cells. PMID:31347690
Modulation of antimicrobial potency of human cathelicidin peptides against the ESKAPE pathogens and in vivo efficacy in a murine catheter-associated biofilm model. PMID:31319057
Biofilms: Novel Strategies Based on Antimicrobial Peptides. PMID:31295834
Quantitation of Super Basic Peptides in Biological Matrices by a Generic Perfluoropentanoic Acid-Based Liquid Chromatography-Mass Spectrometry Method. PMID:31250320
Glycine rich proline rich protein from Sorghum bicolor serves as an antimicrobial protein implicated in plant defense response. PMID:31236845
Low cationicity is important for systemic in vivo efficacy of database-derived peptides against drug-resistant Gram-positive pathogens. PMID:31209048
Dietary Nutrients Mediate Intestinal Host Defense Peptide Expression. PMID:31204774
A scorpion venom peptide derivative BmKn‒22 with potent antibiofilm activity against Pseudomonas aeruginosa. PMID:31199859
Toward Autonomous Antibiotic Discovery. PMID:31186311
In Silico Analysis of Bioactive Peptides in Invasive Sea Grass Halophila stipulacea. PMID:31181665
Sub-inhibitory Effects of Antimicrobial Peptides. PMID:31178852
De Novo Design and In Vitro Testing of Antimicrobial Peptides against Gram-Negative Bacteria. PMID:31163671
Epinecidin-1, a highly potent marine antimicrobial peptide with anticancer and immunomodulatory activities. PMID:31138331
Preparation and in Vitro Evaluation of New Composite Mesh Functionalized with Cationic Antimicrobial Peptide. PMID:31126063
Design and characterization of a new hybrid peptide from LL-37 and BMAP-27. PMID:31118709
Systematic Mutagenesis of Oncocin Reveals Enhanced Activity and Insights into the Mechanisms of Antimicrobial Activity. PMID:31105969
Selection of antimicrobial frog peptides and temporin-1DRa analogues for treatment of bacterial infections based on their cytotoxicity and differential activity against pathogens. PMID:31102497
Probiotics Modulate a Novel Amphibian Skin Defense Peptide That Is Antifungal and Facilitates Growth of Antifungal Bacteria. PMID:31093727
Machine learning antimicrobial peptide sequences: Some surprising variations on the theme of amphiphilic assembly. PMID:31093008
Activity and characterization of a pH-sensitive antimicrobial peptide. PMID:31075228
Metal Binding Antimicrobial Peptides in Nanoparticle Bio-functionalization: New Heights in Drug Delivery and Therapy. PMID:31001788
Application of Synthetic Molecular Evolution to the Discovery of Antimicrobial Peptides. PMID:30980361
Antibacterial Properties and Efficacy of a Novel SPLUNC1-Derived Antimicrobial Peptide, α4-Short, in a Murine Model of Respiratory Infection. PMID:30967458
De novo design of anticancer peptides by ensemble artificial neural networks. PMID:30953170
Heterologous Machine Learning for the Identification of Antimicrobial Activity in Human-Targeted Drugs. PMID:30935109
Are peptides a solution for the treatment of hyperactivated JAK3 pathways? PMID:30929155
A tooth-binding antimicrobial peptide to prevent the formation of dental biofilm. PMID:30929087
The transcriptome analysis of Protaetia brevitarsis Lewis larvae. PMID:30897120
A putative antimicrobial peptide from Hymenoptera in the megaplasmid pSCL4 of Streptomyces clavuligerus ATCC 27064 reveals a singular case of horizontal gene transfer with potential applications. PMID:30891203
Unifying structural signature of eukaryotic α-helical host defense peptides. PMID:30877253
Encodings and models for antimicrobial peptide classification for multi-resistant pathogens. PMID:30867681
A Synthetic Derivative of Antimicrobial Peptide Holothuroidin 2 from Mediterranean Sea Cucumber (Holothuria tubulosa) in the Control of Listeria monocytogenes. PMID:30857142
Enhanced Expression and Functional Characterization of the Recombinant Putative Lysozyme-PMAP36 Fusion Protein. PMID:30841024
Interspecies Bombolitins Exhibit Structural Diversity upon Membrane Binding, Leading to Cell Specificity. PMID:30824115
AntiVPP 1.0: A portable tool for prediction of antiviral peptides. PMID:30802694
Amino Acid Composition Determines Peptide Activity Spectrum and Hot-Spot-Based Design of Merecidin. PMID:30800727
Design, antimicrobial activity and mechanism of action of Arg-rich ultra-short cationic lipopeptides. PMID:30789942
Reassessing the Host Defense Peptide Landscape. PMID:30778385
ImmunoSPdb: an archive of immunosuppressive peptides. PMID:30753476
Antimicrobial peptides from Rana [Lithobates] catesbeiana: Gene structure and bioinformatic identification of novel forms from tadpoles. PMID:30728430
Proteomic Analysis of the Venom from the Ruby Ant Myrmica rubra and the Isolation of a Novel Insecticidal Decapeptide. PMID:30717163
Functionalized Polymeric Materials with Bio-Derived Antimicrobial Peptides for "Active" Packaging. PMID:30704080
Frog Skin Innate Immune Defences: Sensing and Surviving Pathogens. PMID:30692997
TLR4-interacting SPA4 peptide improves host defense and alleviates tissue injury in a mouse model of Pseudomonas aeruginosa lung infection. PMID:30689633
Interaction of two antitumor peptides with membrane lipids - Influence of phosphatidylserine and cholesterol on specificity for melanoma cells. PMID:30682171
Mechanistic Landscape of Membrane-Permeabilizing Peptides. PMID:30624911
Adevonin, a novel synthetic antimicrobial peptide designed from the Adenanthera pavonina trypsin inhibitor (ApTI) sequence. PMID:30570384
Novel BUF2-magnetite nanobioconjugates with cell-penetrating abilities. PMID:30568447
Cell-Selective Pore Forming Antimicrobial Peptides of the Prodomain of Human Furin: A Conserved Aromatic/Cationic Sequence Mapping, Membrane Disruption, and Atomic-Resolution Structure and Dynamics. PMID:30555984
Genetic analysis of signal peptides in amphibian antimicrobial secretions. PMID:30555070
Antimicrobial peptide similarity and classification through rough set theory using physicochemical boundaries. PMID:30522443
Arminin 1a-C, a novel antimicrobial peptide from ancient metazoan Hydra, shows potent antileukemia activity against drug-sensitive and drug-resistant leukemia cells. PMID:30464401
Prediction of Antimicrobial Potential of a Chemically Modified Peptide From Its Tertiary Structure. PMID:30416494
dbAMP: an integrated resource for exploring antimicrobial peptides with functional activities and physicochemical properties on transcriptome and proteome data. PMID:30380085
Insect anal droplets contain diverse proteins related to gut homeostasis. PMID:30376807
A Web Resource for Designing Subunit Vaccine Against Major Pathogenic Species of Bacteria. PMID:30356876
Did cis- and trans-defensins derive from a common ancestor? PMID:30280251
An engineered arginine-rich α-helical antimicrobial peptide exhibits broad-spectrum bactericidal activity against pathogenic bacteria and reduces bacterial infections in mice. PMID:30279591
Antimicrobial genes from Allium sativum and Pinellia ternata revealed by a Bacillus subtilis expression system. PMID:30266995
Innate humoral immune defences in mammals and insects: The same, with differences ? PMID:30257608
Optimal selection of molecular descriptors for antimicrobial peptides classification: an evolutionary feature weighting approach. PMID:30255784
Antimicrobial Peptides: the Achilles' Heel of Antibiotic Resistance? PMID:30229514
Unraveling the bioactivity of anticancer peptides as deduced from machine learning. PMID:30190664
Identification, Recombinant Expression, and Characterization of LHG2, a Novel Antimicrobial Peptide of Lactobacillus casei HZ1. PMID:30177656
Optimal Hydrophobicity and Reorientation of Amphiphilic Peptides Translocating through Membrane. PMID:30177443
Antitumor Ability of KT2 Peptide Derived from Leukocyte Peptide of Crocodile Against Human HCT116 Colon Cancer Xenografts. PMID:30150436
Membrane Active Peptides and Their Biophysical Characterization. PMID:30135402
Efficient Exploitation of Multiple Novel Bacteriocins by Combination of Complete Genome and Peptidome. PMID:30057579
Novel 3D Structure Based Model for Activity Prediction and Design of Antimicrobial Peptides. PMID:30046138
Unveiling the Multifaceted Mechanisms of Antibacterial Activity of Buforin II and Frenatin 2.3S Peptides from Skin Micro-Organs of the Orinoco Lime Treefrog (Sphaenorhynchus lacteus). PMID:30044391
Cleavage of Peptides from Amphibian Skin Revealed by Combining Analysis of Gland Secretion and in Situ MALDI Imaging Mass Spectrometry. PMID:30023919
A coarse-grained approach to studying the interactions of the antimicrobial peptides aurein 1.2 and maculatin 1.1 with POPG/POPE lipid mixtures. PMID:30019106
Cecropin A Modulates Tight Junction-Related Protein Expression and Enhances the Barrier Function of Porcine Intestinal Epithelial Cells by Suppressing the MEK/ERK Pathway. PMID:30004434
Adding a C-terminal Cysteine (CTC) Can Enhance the Bactericidal Activity of Three Different Antimicrobial Peptides. PMID:30002652
Insights into Membrane Translocation of Protegrin Antimicrobial Peptides by Multistep Molecular Dynamics Simulations. PMID:29978143
In Silico Structural Evaluation of Short Cationic Antimicrobial Peptides. PMID:29933540
Expression of the Shrimp wap gene in Drosophila elicits defense responses and protease inhibitory activity. PMID:29884877
Critical Assessment of Methods to Quantify Biofilm Growth and Evaluate Antibiofilm Activity of Host Defence Peptides. PMID:29883434
Antifungal Peptides of the AFP Family Revisited: Are These Cannibal Toxins? PMID:29865265
Antibacterial, antifungal, anticancer activities and structural bioinformatics analysis of six naturally occurring temporins. PMID:29842923
Isolation and characterization of Bacillus sp. GFP-2, a novel Bacillus strain with antimicrobial activities, from Whitespotted bamboo shark intestine. PMID:29785529
What Can Pleiotropic Proteins in Innate Immunity Teach Us about Bioconjugation and Molecular Design? PMID:29771496
Comparative Genomic Analysis of Holospora spp., Intranuclear Symbionts of Paramecia. PMID:29713316
Cathelicidin-Derived Antimicrobial Peptides Inhibit Zika Virus Through Direct Inactivation and Interferon Pathway. PMID:29706959
Proteomics assisted profiling of antimicrobial peptide signatures from black pepper (Piper nigrum L.). PMID:29692546
AntiTbPdb: a knowledgebase of anti-tubercular peptides. PMID:29688365
Food Spoilage-Associated Leuconostoc, Lactococcus, and Lactobacillus Species Display Different Survival Strategies in Response to Competition. PMID:29678911
SpirPep: an in silico digestion-based platform to assist bioactive peptides discovery from a genome-wide database. PMID:29678128
Biophysical Investigations Elucidating the Mechanisms of Action of Antimicrobial Peptides and Their Synergism. PMID:29670065
Tryptophan-Rich and Proline-Rich Antimicrobial Peptides. PMID:29614844
Antimicrobial peptides produced by Brevibacillus spp.: structure, classification and bioactivity: a mini review. PMID:29594558
Deep learning improves antimicrobial peptide recognition. PMID:29590297
Gut microbiota as a source of novel antimicrobials. PMID:29584555
A D-enantiomer of the antimicrobial peptide GL13K evades antimicrobial resistance in the Gram positive bacteria Enterococcus faecalis and Streptococcus gordonii. PMID:29566082
In Silico Approach for Prediction of Antifungal Peptides. PMID:29535692
Physician-initiated clinical study of limb ulcers treated with a functional peptide, SR-0379: from discovery to a randomized, double-blind, placebo-controlled trial. PMID:29449960
A Novel High-Molecular-Mass Bacteriocin Produced by Enterococcus faecium: Biochemical Features and Mode of Action. PMID:29423898
Histone H5 is a potent Antimicrobial Agent and a template for novel Antimicrobial Peptides. PMID:29402952
The Road from Host-Defense Peptides to a New Generation of Antimicrobial Drugs. PMID:29389911
AmPEP: Sequence-based prediction of antimicrobial peptides using distribution patterns of amino acid properties and random forest. PMID:29374199
Innate Immunity to Mucosal Candida Infections. PMID:29371576
Natural Antimicrobial Peptides as Inspiration for Design of a New Generation Antifungal Compounds. PMID:29371563
Immunological Tolerance, Pregnancy, and Preeclampsia: The Roles of Semen Microbes and the Father. PMID:29354635
Large-scale mapping of bioactive peptides in structural and sequence space. PMID:29351315
Identification of natural antimicrobial peptides from bacteria through metagenomic and metatranscriptomic analysis of high-throughput transcriptome data of Taiwanese oolong teas. PMID:29322917
Discovery of Next-Generation Antimicrobials through Bacterial Self-Screening of Surface-Displayed Peptide Libraries. PMID:29307492
Antimicrobial and Antibiofilm Activity of UP-5, an Ultrashort Antimicrobial Peptide Designed Using Only Arginine and Biphenylalanine. PMID:29301331
In-silico design and molecular docking evaluation of peptides derivatives from bacteriocins and porcine beta defensin-2 as inhibitors of Hepatitis E virus capsid protein. PMID:29291214
The Potential of Frog Skin-Derived Peptides for Development into Therapeutically-Valuable Immunomodulatory Agents. PMID:29236056
Keratin 6a reorganization for ubiquitin-proteasomal processing is a direct antimicrobial response. PMID:29191848
Large-Scale Analysis of Antimicrobial Activities in Relation to Amphipathicity and Charge Reveals Novel Characterization of Antimicrobial Peptides. PMID:29165350
High-Throughput Identification of Antimicrobial Peptides from Amphibious Mudskippers. PMID:29165344
Systemic Responses of Multidrug-Resistant Pseudomonas aeruginosa and Acinetobacter baumannii Following Exposure to the Antimicrobial Peptide Cathelicidin-BF Imply Multiple Intracellular Targets. PMID:29164074
Host Antimicrobial Peptides: The Promise of New Treatment Strategies against Tuberculosis. PMID:29163551
What can machine learning do for antimicrobial peptides, and what can antimicrobial peptides do for machine learning? PMID:29147555
Antibacterial Activity of the Non-Cytotoxic Peptide (p-BthTX-I)₂ and Its Serum Degradation Product against Multidrug-Resistant Bacteria. PMID:29113051
Bacterial colonization stimulates a complex physiological response in the immature human intestinal epithelium. PMID:29110754
MLACP: machine-learning-based prediction of anticancer peptides. PMID:29100375
Differential Interaction of Antimicrobial Peptides with Lipid Structures Studied by Coarse-Grained Molecular Dynamics Simulations. PMID:29053635
Encrypted Antimicrobial Peptides from Plant Proteins. PMID:29038449
Antibiofilm agents: A new perspective for antimicrobial strategy. PMID:28956348
Antimicrobial peptides are degraded by the cytosolic proteases of human erythrocytes. PMID:28912099
Highly potent antimicrobial modified peptides derived from the Acinetobacter baumannii phage endolysin LysAB2. PMID:28904355
Fungicidal activity of peptides encoded by immunoglobulin genes. PMID:28883642
High Throughput Identification of Antimicrobial Peptides from Fish Gastrointestinal Microbiota. PMID:28867788
Current treatment options and the role of peptides as potential therapeutic components for Middle East Respiratory Syndrome (MERS): A review. PMID:28864360
Potential role of an antimicrobial peptide, KLK in inhibiting lipopolysaccharide-induced macrophage inflammation. PMID:28850608
Synthetic Antibacterial Peptide Exhibits Synergy with Oxacillin against MRSA. PMID:28835801
Myticalins: A Novel Multigenic Family of Linear, Cationic Antimicrobial Peptides from Marine Mussels (Mytilus spp.). PMID:28829401
Deciphering the tRNA-dependent lipid aminoacylation systems in bacteria: Novel components and structural advances. PMID:28816600
Tumor cell membrane-targeting cationic antimicrobial peptides: novel insights into mechanisms of action and therapeutic prospects. PMID:28770291
Structure-Activity Relationships of Insect Defensins. PMID:28748179
Molecular Dynamics Simulations of the Host Defense Peptide Temporin L and Its Q3K Derivative: An Atomic Level View from Aggregation in Water to Bilayer Perturbation. PMID:28737669
The π Configuration of the WWW Motif of a Short Trp-Rich Peptide Is Critical for Targeting Bacterial Membranes, Disrupting Preformed Biofilms, and Killing Methicillin-Resistant Staphylococcus aureus. PMID:28731688
Machine learning-enabled discovery and design of membrane-active peptides. PMID:28728899
Charged Antimicrobial Peptides Can Translocate across Membranes without Forming Channel-like Pores. PMID:28700927
Titanium surfaces immobilized with the major antimicrobial fragment FK-16 of human cathelicidin LL-37 are potent against multiple antibiotic-resistant bacteria. PMID:28675109
Genomewide Analysis of the Antimicrobial Peptides in Python bivittatus and Characterization of Cathelicidins with Potent Antimicrobial Activity and Low Cytotoxicity. PMID:28630199
Multi-label Learning for Predicting the Activities of Antimicrobial Peptides. PMID:28526820
Perspectives for clinical use of engineered human host defense antimicrobial peptides. PMID:28521337
Bioactive Peptides. PMID:28445415
Differential sensitivity to infections and antimicrobial peptide-mediated immune response in four silkworm strains with different geographical origin. PMID:28432358
Design, synthesis and structure-activity relationship study of wollamide B; a new potential anti TB agent. PMID:28423019
Host defense antimicrobial peptides as antibiotics: design and application strategies. PMID:28399505
Approaches to Dispersing Medical Biofilms. PMID:28368320
Peptide modification results in the formation of a dimer with a 60-fold enhanced antimicrobial activity. PMID:28296935
Membrane Active Antimicrobial Peptides: Translating Mechanistic Insights to Design. PMID:28261050
Predicting antimicrobial peptides with improved accuracy by incorporating the compositional, physico-chemical and structural features into Chou's general PseAAC. PMID:28205576
Empirical comparison of web-based antimicrobial peptide prediction tools. PMID:28203715
Comparative Analysis of the Bacterial Membrane Disruption Effect of Two Natural Plant Antimicrobial Peptides. PMID:28167938
Optimized expression of the antimicrobial protein Gloverin from Galleria mellonella using stably transformed Drosophila melanogaster S2 cells. PMID:28132128
Antimicrobial Peptides from Fruits and Their Potential Use as Biotechnological Tools-A Review and Outlook. PMID:28119671
Ocellatin peptides from the skin secretion of the South American frog Leptodactylus labyrinthicus (Leptodactylidae): characterization, antimicrobial activities and membrane interactions. PMID:28115922
Human Antimicrobial Peptides in Bodily Fluids: Current Knowledge and Therapeutic Perspectives in the Postantibiotic Era. PMID:28094448
Small molecule mimics of DFTamP1, a database designed anti-Staphylococcal peptide. PMID:28011203
Design and surface immobilization of short anti-biofilm peptides. PMID:27915018
Membrane-Active Epithelial Keratin 6A Fragments (KAMPs) Are Unique Human Antimicrobial Peptides with a Non-αβ Structure. PMID:27891122
Antimicrobial Peptides: Mechanisms of Action and Resistance. PMID:27872334
pH Dependent Antimicrobial Peptides and Proteins, Their Mechanisms of Action and Potential as Therapeutic Agents. PMID:27809281
CARD 2017: expansion and model-centric curation of the comprehensive antibiotic resistance database. PMID:27789705
Sarkosyl-Induced Helical Structure of an Antimicrobial Peptide GW-Q6 Plays an Essential Role in the Binding of Surface Receptor OprI in Pseudomonas aeruginosa. PMID:27727309
Cathelicidin Antimicrobial Peptides with Reduced Activation of Toll-Like Receptor Signaling Have Potent Bactericidal Activity against Colistin-Resistant Bacteria. PMID:27651360
Antimicrobial peptide exposure selects for Staphylococcus aureus resistance to human defence peptides. PMID:27650186
Convergent evolution of defensin sequence, structure and function. PMID:27557668
Antimicrobial Protein Candidates from the Thermophilic Geobacillus sp. Strain ZGt-1: Production, Proteomics, and Bioinformatics Analysis. PMID:27548162
Beyond conventional antibiotics - New directions for combination products to combat biofilm. PMID:27496704
Bacteriocins: Not Only Antibacterial Agents. PMID:27481236
De Novo Transcriptome Analysis and Detection of Antimicrobial Peptides of the American Cockroach Periplaneta americana (Linnaeus). PMID:27167617
The Spider Venom Peptide Lycosin-II Has Potent Antimicrobial Activity against Clinically Isolated Bacteria. PMID:27128941
Leveraging family-specific signatures for AMP discovery and high-throughput annotation. PMID:27089856
The immunology of host defence peptides: beyond antimicrobial activity. PMID:27087664
Antibiofilm Peptides: Potential as Broad-Spectrum Agents. PMID:27068589
Potential Use of Antimicrobial Peptides as Vaginal Spermicides/Microbicides. PMID:26978373
APD2: the updated antimicrobial peptide database and its application in peptide design PubMed citations: 287.

287 articles citing: APD2: the updated antimicrobial peptide database and its application in peptide design

Targeted Antimicrobial Agents as Potential Tools for Modulating the Gut Microbiome. PMID:35875544
PTPAMP: prediction tool for plant-derived antimicrobial peptides. PMID:35864258
In silico identification of two peptides with antibacterial activity against multidrug-resistant Staphylococcus aureus. PMID:35835775
PR-1-Like Protein as a Potential Target for the Identification of Fusarium oxysporum: An In Silico Approach. PMID:35822818
Antimicrobial Peptide Analogs From Scorpions: Modifications and Structure-Activity. PMID:35712354
To Assist Oncologists: An Efficient Machine Learning-Based Approach for Anti-Cancer Peptides Classification. PMID:35684624
Improved Database Filtering Technology Enables More Efficient Ab Initio Design of Potent Peptides against Ebola Viruses. PMID:35631348
Characterization of the structure-function relationship of a novel salt-resistant antimicrobial peptide, RR12. PMID:35517355
Host Defence Peptides: A Potent Alternative to Combat Antimicrobial Resistance in the Era of the COVID-19 Pandemic. PMID:35453226
Histidine-Mediated Ion Specific Effects Enable Salt Tolerance of a Pore-Forming Marine Antimicrobial Peptide. PMID:35352449
Antimicrobial Activity Enhancers: Towards Smart Delivery of Antimicrobial Agents. PMID:35326875
Performance of Novel Antimicrobial Protein Bg_9562 and In Silico Predictions on Its Properties with Reference to Its Antimicrobial Efficiency against Rhizoctonia solani. PMID:35326826
A review on antimicrobial peptides databases and the computational tools. PMID:35305010
Machine Learning Prediction of Antimicrobial Peptides. PMID:35298806
Unifying the classification of antimicrobial peptides in the antimicrobial peptide database. PMID:35168785
In Silico and In Vitro Structure-Activity Relationship of Mastoparan and Its Analogs. PMID:35056876
Isolation and Chemical Characterization of an Alpha-Helical Peptide, Dendrocin-ZM1, Derived from Zataria multiflora Boiss with Potent Antibacterial Activity. PMID:35050481
Developing Antimicrobial Synergy With AMPs. PMID:35047912
Structure and Activity of a Selective Antibiofilm Peptide SK-24 Derived from the NMR Structure of Human Cathelicidin LL-37. PMID:34959645
Natural Peptides Inducing Cancer Cell Death: Mechanisms and Properties of Specific Candidates for Cancer Therapeutics. PMID:34946535
An Antibacterial Peptide with High Resistance to Trypsin Obtained by Substituting d-Amino Acids for Trypsin Cleavage Sites. PMID:34943677
Building HMM and molecular docking analysis for the sensitive detection of anti-viral pneumonia antimicrobial peptides (AMPs). PMID:34663864
Machine learning-enabled predictive modeling to precisely identify the antimicrobial peptides. PMID:34632545
The evolution of the antimicrobial peptide database over 18 years: Milestones and new features. PMID:34529321
Activity of Anti-Microbial Peptides (AMPs) against Leishmania and Other Parasites: An Overview. PMID:34356608
Significance of Endogenous Antimicrobial Peptides on the Health of Food Animals. PMID:34262957
The multifaceted nature of antimicrobial peptides: current synthetic chemistry approaches and future directions. PMID:34042120
In silico Approaches for the Design and Optimization of Interfering Peptides Against Protein-Protein Interactions. PMID:33996914
Cracking the Challenge of Antimicrobial Drug Resistance with CRISPR/Cas9, Nanotechnology and Other Strategies in ESKAPE Pathogens. PMID:33946643
Ensemble-AMPPred: Robust AMP Prediction and Recognition Using the Ensemble Learning Method with a New Hybrid Feature for Differentiating AMPs. PMID:33494403
Large-scale comparative review and assessment of computational methods for anti-cancer peptide identification. PMID:33316035
Secretory Peptides as Bullets: Effector Peptides from Pathogens against Antimicrobial Peptides from Soybean. PMID:33291499
Identification of biomarkers for the accurate and sensitive diagnosis of three bacterial pneumonia pathogens using in silico approaches. PMID:33218302
A bioinformatic study of antimicrobial peptides identified in the Black Soldier Fly (BSF) Hermetia illucens (Diptera: Stratiomyidae). PMID:33037295
Discovery of Novel Type II Bacteriocins Using a New High-Dimensional Bioinformatic Algorithm. PMID:33013838
Leveraging orthogonal mass spectrometry based strategies for comprehensive sequencing and characterization of ribosomal antimicrobial peptide natural products. PMID:32929442
Bioinformatic Analysis of 1000 Amphibian Antimicrobial Peptides Uncovers Multiple Length-Dependent Correlations for Peptide Design and Prediction. PMID:32784626
Phosphate-dependent aggregation of [KL]n peptides affects their membranolytic activity. PMID:32704013
The Critical Role of Tryptophan in the Antimicrobial Activity and Cell Toxicity of the Duck Antimicrobial Peptide DCATH. PMID:32670215
Discovery and mechanistic characterization of a structurally-unique membrane active peptide. PMID:32562695
Insilico Alpha-Helical Structural Recognition of Temporin Antimicrobial Peptides and Its Interactions with Middle East Respiratory Syndrome-Coronavirus. PMID:32206049
An automatic representation of peptides for effective antimicrobial activity classification. PMID:32180904
Antifungal Activity of Anionic Defense Peptides: Insight into the Action of Galleria mellonella Anionic Peptide 2. PMID:32168818
Plantaricin NC8 αβ exerts potent antimicrobial activity against Staphylococcus spp. and enhances the effects of antibiotics. PMID:32107445
ACE inhibitory peptides in standard and fermented deer velvet: an in silico and in vitro investigation. PMID:31806003
ADAPTABLE: a comprehensive web platform of antimicrobial peptides tailored to the user's research. PMID:31740563
The host-defense peptide piscidin P1 reorganizes lipid domains in membranes and decreases activation energies in mechanosensitive ion channels. PMID:31619519
Computational screening of antimicrobial peptides for Acinetobacter baumannii. PMID:31577808
Natural Occurrence in Venomous Arthropods of Antimicrobial Peptides Active against Protozoan Parasites. PMID:31557900
Insight into the Antifungal Mechanism of Action of Human RNase N-terminus Derived Peptides. PMID:31540052
The antimicrobial peptide database provides a platform for decoding the design principles of naturally occurring antimicrobial peptides. PMID:31361941
Low cationicity is important for systemic in vivo efficacy of database-derived peptides against drug-resistant Gram-positive pathogens. PMID:31209048
An advanced approach to identify antimicrobial peptides and their function types for penaeus through machine learning strategies. PMID:31182007
Sarconesin II, a New Antimicrobial Peptide Isolated from Sarconesiopsis magellanica Excretions and Secretions. PMID:31159162
Structure and Function in Antimicrobial Piscidins: Histidine Position, Directionality of Membrane Insertion, and pH-Dependent Permeabilization. PMID:31144503
Analysis of the Ribonuclease A Superfamily of Antimicrobial Peptides in Patients Undergoing Chronic Peritoneal Dialysis. PMID:31123272
Machine learning antimicrobial peptide sequences: Some surprising variations on the theme of amphiphilic assembly. PMID:31093008
Metal Binding Antimicrobial Peptides in Nanoparticle Bio-functionalization: New Heights in Drug Delivery and Therapy. PMID:31001788
Hydrophobic and antimicrobial dentin: A peptide-based 2-tier protective system for dental resin composite restorations. PMID:30753942
Potent and Broad-Spectrum Antimicrobial Activity of Analogs from the Scorpion Peptide Stigmurin. PMID:30709056
Interaction of two antitumor peptides with membrane lipids - Influence of phosphatidylserine and cholesterol on specificity for melanoma cells. PMID:30682171
Structure and Synthesis of Antifungal Disulfide β-Strand Proteins from Filamentous Fungi. PMID:30591636
Antimicrobial peptide similarity and classification through rough set theory using physicochemical boundaries. PMID:30522443
Peptidoglycan potentiates the membrane disrupting effect of the carboxyamidated form of DMS-DA6, a Gram-positive selective antimicrobial peptide isolated from Pachymedusa dacnicolor skin. PMID:30325956
Tuneable poration: host defense peptides as sequence probes for antimicrobial mechanisms. PMID:30297841
Identifying anticancer peptides by using a generalized chaos game representation. PMID:30291366
A novel antimicrobial peptide, Ranatuerin-2PLx, showing therapeutic potential in inhibiting proliferation of cancer cells. PMID:30279210
Antibacterial Activity and Mechanism of Action of Bovine Lactoferricin Derivatives with Symmetrical Amino Acid Sequences. PMID:30262770
Unraveling the bioactivity of anticancer peptides as deduced from machine learning. PMID:30190664
Insights into Membrane Translocation of Protegrin Antimicrobial Peptides by Multistep Molecular Dynamics Simulations. PMID:29978143
Antibacterial, antifungal, anticancer activities and structural bioinformatics analysis of six naturally occurring temporins. PMID:29842923
What Can Pleiotropic Proteins in Innate Immunity Teach Us about Bioconjugation and Molecular Design? PMID:29771496
In silico optimization of a guava antimicrobial peptide enables combinatorial exploration for peptide design. PMID:29662055
A Novel Hybrid Sequence-Based Model for Identifying Anticancer Peptides. PMID:29534013
Antimicrobial Peptides for Topical Treatment of Osteomyelitis and Implant-Related Infections: Study in the Spongy Bone. PMID:29462909
Physician-initiated clinical study of limb ulcers treated with a functional peptide, SR-0379: from discovery to a randomized, double-blind, placebo-controlled trial. PMID:29449960
AmPEP: Sequence-based prediction of antimicrobial peptides using distribution patterns of amino acid properties and random forest. PMID:29374199
Human Neutrophil Peptide 1 as immunotherapeutic agent against Leishmania infected BALB/c mice. PMID:29253854
What can machine learning do for antimicrobial peptides, and what can antimicrobial peptides do for machine learning? PMID:29147555
Encrypted Antimicrobial Peptides from Plant Proteins. PMID:29038449
Bacterial Secretome Analysis in Hunt for Novel Bacteriocins with Ability to Control Xanthomonas citri subsp. Citri. PMID:28959294
Highly potent antimicrobial modified peptides derived from the Acinetobacter baumannii phage endolysin LysAB2. PMID:28904355
Buwchitin: A Ruminal Peptide with Antimicrobial Potential against Enterococcus faecalis. PMID:28748180
Common and phylogenetically widespread coding for peptides by bacterial small RNAs. PMID:28732463
Machine learning-enabled discovery and design of membrane-active peptides. PMID:28728899
Individual and Combined Effects of Engineered Peptides and Antibiotics on Pseudomonas aeruginosa Biofilms. PMID:28672834
Screening and Optimizing Antimicrobial Peptides by Using SPOT-Synthesis. PMID:28447030
Direct Antimicrobial Activity of IFN-β. PMID:28411186
Host defense antimicrobial peptides as antibiotics: design and application strategies. PMID:28399505
Production of BP178, a derivative of the synthetic antibacterial peptide BP100, in the rice seed endosperm. PMID:28292258
Empirical comparison of web-based antimicrobial peptide prediction tools. PMID:28203715
Function annotation of peptides generated from the non-coding regions of D. melanogaster genome. PMID:28149056
Interaction of aurein 1.2 and its analogue with DPPC lipid bilayer. PMID:28130642
Computer aided identification of a Hevein-like antimicrobial peptide of bell pepper leaves for biotechnological use. PMID:28105928
Study of the Antimicrobial Activity of Tilapia Piscidin 3 (TP3) and TP4 and Their Effects on Immune Functions in Hybrid Tilapia (Oreochromis spp.). PMID:28085905
Construction of antimicrobial peptide-drug combination networks from scientific literature based on a semi-automated curation workflow. PMID:28025336
Transcriptome Analysis to Understand the Toxicity of Latrodectus tredecimguttatus Eggs. PMID:27999389
Annotation of the Asian Citrus Psyllid Genome Reveals a Reduced Innate Immune System. PMID:27965582
PEPlife: A Repository of the Half-life of Peptides. PMID:27819351
Sarkosyl-Induced Helical Structure of an Antimicrobial Peptide GW-Q6 Plays an Essential Role in the Binding of Surface Receptor OprI in Pseudomonas aeruginosa. PMID:27727309
Nematode Peptides with Host-Directed Anti-inflammatory Activity Rescue Caenorhabditis elegans from a Burkholderia pseudomallei Infection. PMID:27672387
Identifying anticancer peptides by using improved hybrid compositions. PMID:27670968
Antimicrobial Peptides Targeting Gram-Positive Bacteria. PMID:27657092
Imbalanced multi-label learning for identifying antimicrobial peptides and their functional types. PMID:27565585
Convergent evolution of defensin sequence, structure and function. PMID:27557668
Peptides from American alligator plasma are antimicrobial against multi-drug resistant bacterial pathogens including Acinetobacter baumannii. PMID:27542832
Bioactive Molecules Released in Food by Lactic Acid Bacteria: Encrypted Peptides and Biogenic Amines. PMID:27375596
Towards Identify Selective Antibacterial Peptides Based on Abstracts Meaning. PMID:27366202
A peptide from human β thymosin as a platform for the development of new anti-biofilm agents for Staphylococcus spp. and Pseudomonas aeruginosa. PMID:27339305
Antimicrobial Activity of Lactoferrin-Related Peptides and Applications in Human and Veterinary Medicine. PMID:27294909
Insights into Antimicrobial Peptides from Spiders and Scorpions. PMID:27165405
Development of Antimicrobial Peptide Prediction Tool for Aquaculture Industries. PMID:27141850
Role of Aromatic Amino Acids in Lipopolysaccharide and Membrane Interactions of Antimicrobial Peptides for Use in Plant Disease Control. PMID:27137928
DRAMP: a comprehensive data repository of antimicrobial peptides. PMID:27075512
Comparative functional properties of engineered cationic antimicrobial peptides consisting exclusively of tryptophan and either lysine or arginine. PMID:27046192
Short, Synthetic Cationic Peptides Have Antibacterial Activity against Mycobacterium smegmatis by Forming Pores in Membrane and Synergizing with Antibiotics. PMID:27025629
A Review of Ribonuclease 7's Structure, Regulation, and Contributions to Host Defense. PMID:27011175
Novel Antimicrobial Peptides EeCentrocins 1, 2 and EeStrongylocin 2 from the Edible Sea Urchin Echinus esculentus Have 6-Br-Trp Post-Translational Modifications. PMID:27007817
Characterization and regulation of expression of an antifungal peptide from hemolymph of an insect, Manduca sexta. PMID:26976231
cDNA cloning and molecular characterization of a defensin-like antimicrobial peptide from larvae of Protaetia brevitarsis seulensis (Kolbe). PMID:26970764
A Web Server and Mobile App for Computing Hemolytic Potency of Peptides. PMID:26953092
iACP: a sequence-based tool for identifying anticancer peptides. PMID:26942877
Venom peptides cathelicidin and lycotoxin cause strong inhibition of Escherichia coli ATP synthase. PMID:26930579
dPABBs: A Novel in silico Approach for Predicting and Designing Anti-biofilm Peptides. PMID:26912180
Combined Bioinformatic and Rational Design Approach To Develop Antimicrobial Peptides against Mycobacterium tuberculosis. PMID:26902758
Green fluorescent protein as a scaffold for high efficiency production of functional bacteriotoxic proteins in Escherichia coli. PMID:26864123
PFR peptide, one of the antimicrobial peptides identified from the derivatives of lactoferrin, induces necrosis in leukemia cells. PMID:26860588
Natural antimicrobial peptides as promising anti-HIV candidates. PMID:26834391
Anti-Staphylococcal Biofilm Effects of Human Cathelicidin Peptides. PMID:26819677
Physicochemical and biological characterizations of Pxt peptides from amphibian (Xenopus tropicalis) skin. PMID:26802742
Interaction of the core fragments of the LL-37 host defense peptide with actin. PMID:26726303
Design and Synthesis of a Novel Cationic Peptide with Potent and Broad-Spectrum Antimicrobial Activity. PMID:26688811
Identification of a novel antimicrobial peptide from amphioxus Branchiostoma japonicum by in silico and functional analyses. PMID:26680226
Expression and Significance of the HIP/PAP and RegIIIγ Antimicrobial Peptides during Mammalian Urinary Tract Infection. PMID:26658437
APD3: the antimicrobial peptide database as a tool for research and education. PMID:26602694
Antimicrobial Peptides from Plants. PMID:26580629
DBAASP v.2: an enhanced database of structure and antimicrobial/cytotoxic activity of natural and synthetic peptides. PMID:26578581
High specific selectivity and Membrane-Active Mechanism of the synthetic centrosymmetric α-helical peptides with Gly-Gly pairs. PMID:26530005
SATPdb: a database of structurally annotated therapeutic peptides. PMID:26527728
CAMPR3: a database on sequences, structures and signatures of antimicrobial peptides. PMID:26467475
Antimicrobial Peptides as Mediators of Innate Immunity in Teleosts. PMID:26426065
Non-invasive imaging and cellular tracking of pulmonary emboli by near-infrared fluorescence and positron-emission tomography. PMID:26423607
Identification of a Novel Proline-Rich Antimicrobial Peptide from Brassica napus. PMID:26383098
The Potential Use of Natural and Structural Analogues of Antimicrobial Peptides in the Fight against Neglected Tropical Diseases. PMID:26305243
Latarcins: versatile spider venom peptides. PMID:26286896
Small lipopeptides possess anti-biofilm capability comparable to daptomycin and vancomycin. PMID:26257894
AVP-IC50 Pred: Multiple machine learning techniques-based prediction of peptide antiviral activity in terms of half maximal inhibitory concentration (IC50). PMID:26213387
An in silico platform for predicting, screening and designing of antihypertensive peptides. PMID:26213115
Peptides and Peptidomimetics for Antimicrobial Drug Design. PMID:26184232
The Human Cathelicidin Antimicrobial Peptide LL-37 and Mimics are Potential Anticancer Drugs. PMID:26175965
Amplifying renal immunity: the role of antimicrobial peptides in pyelonephritis. PMID:26149835
Anti-proliferative effect on a colon adenocarcinoma cell line exerted by a membrane disrupting antimicrobial peptide KL15. PMID:26147829
Trans-Species Polymorphism in Immune Genes: General Pattern or MHC-Restricted Phenomenon? PMID:26090501
The Frog Skin-Derived Antimicrobial Peptide Esculentin-1a(1-21)NH2 Promotes the Migration of Human HaCaT Keratinocytes in an EGF Receptor-Dependent Manner: A Novel Promoter of Human Skin Wound Healing? PMID:26068861
Antimicrobial Activity of Novel Synthetic Peptides Derived from Indolicidin and Ranalexin against Streptococcus pneumoniae. PMID:26046345
A large-scale structural classification of antimicrobial peptides. PMID:26000295
NeuroPep: a comprehensive resource of neuropeptides. PMID:25931458
Cm-p5: an antifungal hydrophilic peptide derived from the coastal mollusk Cenchritis muricatus (Gastropoda: Littorinidae). PMID:25921828
Modifications of natural peptides for nanoparticle and drug design. PMID:25819276
Plant antimicrobial peptides as potential anticancer agents. PMID:25815333
Hydrophobic mismatch demonstrated for membranolytic peptides, and their use as molecular rulers to measure bilayer thickness in native cells. PMID:25807192
Antimicrobial peptides in 2014. PMID:25806720
Analysis and prediction of the critical regions of antimicrobial peptides based on conditional random fields. PMID:25803302
Prediction of antimicrobial peptides based on sequence alignment and support vector machine-pairwise algorithm utilizing LZ-complexity. PMID:25802839
Hydrophilic/hydrophobic characters of antimicrobial peptides derived from animals and their effects on multidrug resistant clinical isolates. PMID:25730460
Bioprospecting the American alligator (Alligator mississippiensis) host defense peptidome. PMID:25671663
Antimicrobial peptides: a new class of antimalarial drugs? PMID:25566072
Membrane-active peptides from marine organisms--antimicrobials, cell-penetrating peptides and peptide toxins: applications and prospects. PMID:25559972
Improved methods for classification, prediction, and design of antimicrobial peptides. PMID:25555720
Alternatives to antibiotics in animal agriculture: an ecoimmunological view. PMID:25551290
The extraembryonic serosa is a frontier epithelium providing the insect egg with a full-range innate immune response. PMID:25487990
Scorpion venom components as potential candidates for drug development. PMID:25432067
Paracentrin 1, a synthetic antimicrobial peptide from the sea-urchin Paracentrotus lividus, interferes with staphylococcal and Pseudomonas aeruginosa biofilm formation. PMID:25401078
Distinct profiling of antimicrobial peptide families. PMID:25388148
BactPepDB: a database of predicted peptides from a exhaustive survey of complete prokaryote genomes. PMID:25377257
Cobra cytotoxins: structural organization and antibacterial activity. PMID:25349711
Copsin, a novel peptide-based fungal antibiotic interfering with the peptidoglycan synthesis. PMID:25342741
Insights into novel antimicrobial compounds and antibiotic resistance genes from soil metagenomes. PMID:25278933
CancerPPD: a database of anticancer peptides and proteins. PMID:25270878
Ternary nylon-3 copolymers as host-defense peptide mimics: beyond hydrophobic and cationic subunits. PMID:25269798
Piloting the membranolytic activities of peptides with a self-organizing map. PMID:25204788
A non-pediocin low molecular weight antimicrobial peptide produced by Pediococcus pentosaceus strain IE-3 shows increased activity under reducing environment. PMID:25158757
Designing of peptides with desired half-life in intestine-like environment. PMID:25141912
New milk protein-derived peptides with potential antimicrobial activity: an approach based on bioinformatic studies. PMID:25141106
Membrane interactions of phylloseptin-1, -2, and -3 peptides by oriented solid-state NMR spectroscopy. PMID:25140425
Characterization of antibacterial and hemolytic activity of synthetic pandinin 2 variants and their inhibition against Mycobacterium tuberculosis. PMID:25019413
Polar profile of antiviral peptides from AVPpred Database. PMID:24993579
ParaPep: a web resource for experimentally validated antiparasitic peptide sequences and their structures. PMID:24923818
Antimicrobial peptides in reptiles. PMID:24918867
Killing of melanoma cells and their metastases by human lactoferricin derivatives requires interaction with the cancer marker phosphatidylserine. PMID:24838743
Human antimicrobial peptides and proteins. PMID:24828484
Role of helicity of α-helical antimicrobial peptides to improve specificity. PMID:24805306
Modular analysis of hipposin, a histone-derived antimicrobial peptide consisting of membrane translocating and membrane permeabilizing fragments. PMID:24747525
Novel anti-microbial peptide SR-0379 accelerates wound healing via the PI3 kinase/Akt/mTOR pathway. PMID:24675668
Antimicrobial peptides in the centipede Scolopendra subspinipes mutilans. PMID:24652097
Critical design aspects involved in the study of Paneth cells and the intestinal microbiota. PMID:24637592
Novel LanT associated lantibiotic clusters identified by genome database mining. PMID:24621781
Effect of the aspartic acid D2 on the affinity of Polybia-MP1 to anionic lipid vesicles. PMID:24595375
Lucifensins, the Insect Defensins of Biomedical Importance: The Story behind Maggot Therapy. PMID:24583934
Recent advances in the field of antimicrobial peptides in inflammatory diseases. PMID:24516850
Post-translational Modifications of Natural Antimicrobial Peptides and Strategies for Peptide Engineering. PMID:24511461
High-quality 3D structures shine light on antibacterial, anti-biofilm and antiviral activities of human cathelicidin LL-37 and its fragments. PMID:24463069
Penetration of milk-derived antimicrobial peptides into phospholipid monolayers as model biomembranes. PMID:24455264
Strategies and molecular tools to fight antimicrobial resistance: resistome, transcriptome, and antimicrobial peptides. PMID:24427156
High-resolution structures and orientations of antimicrobial peptides piscidin 1 and piscidin 3 in fluid bilayers reveal tilting, kinking, and bilayer immersion. PMID:24410116
Localization of antimicrobial peptides in the tunic of Ciona intestinalis (Ascidiacea, Tunicata) and their involvement in local inflammatory-like reactions. PMID:24371555
Dimeric unnatural polyproline-rich peptides with enhanced antibacterial activity. PMID:24365160
Structural location determines functional roles of the basic amino acids of KR-12, the smallest antimicrobial peptide from human cathelicidin LL-37. PMID:24307932
AVPdb: a database of experimentally validated antiviral peptides targeting medically important viruses. PMID:24285301
Database-Guided Discovery of Potent Peptides to Combat HIV-1 or Superbugs. PMID:24276259
CAMP: Collection of sequences and structures of antimicrobial peptides. PMID:24265220
C-PAmP: large scale analysis and database construction containing high scoring computationally predicted antimicrobial peptides for all the available plant species. PMID:24244550
Antimicrobial peptides: new drugs for bad bugs? PMID:24206062
Hemolytik: a database of experimentally determined hemolytic and non-hemolytic peptides. PMID:24174543
Bactofencin A, a new type of cationic bacteriocin with unusual immunity. PMID:24169573
In silico models for designing and discovering novel anticancer peptides. PMID:24136089
From antimicrobial to anticancer peptides. A review. PMID:24101917
Vitellogenin from the silkworm, Bombyx mori: an effective anti-bacterial agent. PMID:24058454
On the role of NMR spectroscopy for characterization of antimicrobial peptides. PMID:23975777
De-novo design of antimicrobial peptides for plant protection. PMID:23951222
Cathelicidin-like helminth defence molecules (HDMs): absence of cytotoxic, anti-microbial and anti-protozoan activities imply a specific adaptation to immune modulation. PMID:23875042
The Human Cathelicidin Antimicrobial Peptide LL-37 as a Potential Treatment for Polymicrobial Infected Wounds. PMID:23840194
LAMP: A Database Linking Antimicrobial Peptides. PMID:23825543
FK-16 derived from the anticancer peptide LL-37 induces caspase-independent apoptosis and autophagic cell death in colon cancer cells. PMID:23700428
Identification of cell-penetrating peptides that are bactericidal to Neisseria meningitidis and prevent inflammatory responses upon infection. PMID:23689723
Extensive in vivo human milk peptidomics reveals specific proteolysis yielding protective antimicrobial peptides. PMID:23586814
Peptide design for antimicrobial and immunomodulatory applications. PMID:23553602
Rational design of engineered cationic antimicrobial peptides consisting exclusively of arginine and tryptophan, and their activity against multidrug-resistant pathogens. PMID:23507278
Prediction of antimicrobial activity of synthetic peptides by a decision tree model. PMID:23455341
Design of histidine-rich peptides with enhanced bioavailability and inhibitory activity against hepatitis C virus. PMID:23415044
A peptide derived from phage display library exhibits antibacterial activity against E. coli and Pseudomonas aeruginosa. PMID:23409125
A technology for developing synbodies with antibacterial activity. PMID:23372679
HIPdb: a database of experimentally validated HIV inhibiting peptides. PMID:23359817
Structure-activity relationships of the antimicrobial peptide arasin 1 - and mode of action studies of the N-terminal, proline-rich region. PMID:23326415
AMDD: antimicrobial drug database. PMID:23317704
CS-AMPPred: an updated SVM model for antimicrobial activity prediction in cysteine-stabilized peptides. PMID:23240023
Selection of antiviral peptides against mink enteritis virus using a phage display Peptide library. PMID:23238955
Antimicrobial peptides: utility players in innate immunity. PMID:23112800
Integrating "omics" Technologies to Conceptualize Dynamic Antimicrobial Peptide Responses. PMID:23060875
The Importance of Amino Acid Composition in Natural AMPs: An Evolutional, Structural, and Functional Perspective. PMID:23060873
Structural and functional characterization of a multifunctional alanine-rich peptide analogue from Pleuronectes americanus. PMID:23056574
Towards the improved discovery and design of functional peptides: common features of diverse classes permit generalized prediction of bioactivity. PMID:23056189
ThioFinder: a web-based tool for the identification of thiopeptide gene clusters in DNA sequences. PMID:23029291
Probing protein sequences as sources for encrypted antimicrobial peptides. PMID:23029273
Cytokeratins mediate epithelial innate defense through their antimicrobial properties. PMID:23006328
In vitro evaluation of the potential for resistance development to ceragenin CSA-13. PMID:22899801
Ab initio design of potent anti-MRSA peptides based on database filtering technology. PMID:22803960
Thermodynamic interactions of a cis and trans benzanilide with Escherichia coli bacterial membranes. PMID:22782185
AVPpred: collection and prediction of highly effective antiviral peptides. PMID:22638580
Characterization of selective antibacterial peptides by polarity index. PMID:22611416
Coleopteran antimicrobial peptides: prospects for clinical applications. PMID:22500175
EnzyBase: a novel database for enzybiotic studies. PMID:22489867
Lysine substitutions convert a bacterial-agglutinating peptide into a bactericidal peptide that retains anti-lipopolysaccharide activity and low hemolytic activity. PMID:22484285
Peptides of the constant region of antibodies display fungicidal activity. PMID:22470523
Database screening and in vivo efficacy of antimicrobial peptides against methicillin-resistant Staphylococcus aureus USA300. PMID:22445495
Macin family of antimicrobial proteins combines antimicrobial and nerve repair activities. PMID:22396551
Mechanisms and modifications of naturally occurring host defense peptides for anti-HIV microbicide development. PMID:22264047
Structure, dynamics, and antimicrobial and immune modulatory activities of human LL-23 and its single-residue variants mutated on the basis of homologous primate cathelicidins. PMID:22185690
Designing antimicrobial peptides: form follows function. PMID:22173434
TDR Targets: a chemogenomics resource for neglected diseases. PMID:22116064
DAMPD: a manually curated antimicrobial peptide database. PMID:22110032
Decoding the functional roles of cationic side chains of the major antimicrobial region of human cathelicidin LL-37. PMID:22083479
Membrane-active host defense peptides--challenges and perspectives for the development of novel anticancer drugs. PMID:21945565
Characterization of a potent antimicrobial lipopeptide via coarse-grained molecular dynamics. PMID:21819964
Detection of putative new mutacins by bioinformatic analysis using available web tools. PMID:21756306
Cationic amphipathic peptides accumulate sialylated proteins and lipids in the plasma membrane of eukaryotic host cells. PMID:21718688
Protecting the boundary: the sentinel role of host defense peptides in the skin. PMID:21573782
Draft genome sequence of the marine Streptomyces sp. strain PP-C42, isolated from the Baltic Sea. PMID:21571991
Real-time attack on single Escherichia coli cells by the human antimicrobial peptide LL-37. PMID:21464330
Survival strategies of yeast and filamentous fungi against the antifungal protein AFP. PMID:21343301
Powerful workhorses for antimicrobial peptide expression and characterization. PMID:21326929
Knowledge-based computational methods for identifying or designing novel, non-homologous antimicrobial peptides. PMID:21274708
Diversity of coding sequences and gene structures of the antifungal peptide mytimycin (MytM) from the Mediterranean mussel, Mytilus galloprovincialis. PMID:21246236
Alpha-helical cationic antimicrobial peptides: relationships of structure and function. PMID:21203984
Genome sequence of Bacillus subtilis subsp. spizizenii gtP20b, isolated from the Indian ocean. PMID:21183663
Enhancement of cytotoxicity of antimicrobial peptide magainin II in tumor cells by bombesin-targeted delivery. PMID:21131998
Screening for antifungal peptides and their modes of action in Aspergillus nidulans. PMID:20833782
Cationic amphiphiles, a new generation of antimicrobials inspired by the natural antimicrobial peptide scaffold. PMID:20696877
The virucidal EB peptide protects host cells from herpes simplex virus type 1 infection in the presence of serum albumin and aggregates proteins in a detergent-like manner. PMID:20643896
Emerging roles of the host defense peptide LL-37 in human cancer and its potential therapeutic applications. PMID:20521250
Bacteriocin as weapons in the marine animal-associated bacteria warfare: inventory and potential applications as an aquaculture probiotic. PMID:20479972
Communication: Antimicrobial Activity of SMAP28 with a Targeting Domain for Porphyromonas gingivalis. PMID:20454638
BACTIBASE second release: a database and tool platform for bacteriocin characterization. PMID:20105292
Identification of novel human immunodeficiency virus type 1-inhibitory peptides based on the antimicrobial peptide database. PMID:20086159
Defensins as anti-inflammatory compounds and mucosal adjuvants. PMID:20020832
Host defense peptides as effector molecules of the innate immune response: a sledgehammer for drug resistance? PMID:19865528
Structure of chemokine-derived antimicrobial Peptide interleukin-8alpha and interaction with detergent micelles and oriented lipid bilayers. PMID:19813761
APD: the Antimicrobial Peptide Database PubMed citations: 242.

242 articles citing: APD: the Antimicrobial Peptide Database

Analytical Studies of Antimicrobial Peptides as Diagnostic Biomarkers for the Detection of Bacterial and Viral Pneumonia. PMID:35877356
PR-1-Like Protein as a Potential Target for the Identification of Fusarium oxysporum: An In Silico Approach. PMID:35822818
Sphingosine-1-Phosphate-Triggered Expression of Cathelicidin LL-37 Promotes the Growth of Human Bladder Cancer Cells. PMID:35806446
Antiviral Peptides (AVPs) of Marine Origin as Propitious Therapeutic Drug Candidates for the Treatment of Human Viruses. PMID:35565968
Characterization of the structure-function relationship of a novel salt-resistant antimicrobial peptide, RR12. PMID:35517355
HORDB a comprehensive database of peptide hormones. PMID:35469024
Realistic and critical review of the state of systemic antimicrobial peptides. PMID:35350118
Machine Learning Prediction of Antimicrobial Peptides. PMID:35298806
Implications of Human Antimicrobial Peptide Defensin Beta-1 in Clinical Oral Squamous Cell Carcinoma Patients via an Integrated Bioinformatics Approach. PMID:35222682
Unifying the classification of antimicrobial peptides in the antimicrobial peptide database. PMID:35168785
Bioactive Peptides: Synthesis, Sources, Applications, and Proposed Mechanisms of Action. PMID:35163367
Bromelain and Nisin: The Natural Antimicrobials with High Potential in Biomedicine. PMID:35056972
Structure and Activity of a Selective Antibiofilm Peptide SK-24 Derived from the NMR Structure of Human Cathelicidin LL-37. PMID:34959645
Nanotechnology-Based Delivery Systems for Antimicrobial Peptides. PMID:34834210
Building HMM and molecular docking analysis for the sensitive detection of anti-viral pneumonia antimicrobial peptides (AMPs). PMID:34663864
Machine learning-enabled predictive modeling to precisely identify the antimicrobial peptides. PMID:34632545
Antimicrobial peptides as a feed additive alternative to animal production, food safety and public health implications: An overview. PMID:34632120
The evolution of the antimicrobial peptide database over 18 years: Milestones and new features. PMID:34529321
Mesenchymal stromal cell-secreted CCL2 promotes antibacterial defense mechanisms through increased antimicrobial peptide expression in keratinocytes. PMID:34528765
Peptipedia: a user-friendly web application and a comprehensive database for peptide research supported by Machine Learning approach. PMID:34478499
Activity of Anti-Microbial Peptides (AMPs) against Leishmania and Other Parasites: An Overview. PMID:34356608
Porcine Myeloid Antimicrobial Peptides: A Review of the Activity and Latest Advances. PMID:34055951
The multifaceted nature of antimicrobial peptides: current synthetic chemistry approaches and future directions. PMID:34042120
Using molecular dynamics simulations to prioritize and understand AI-generated cell penetrating peptides. PMID:34017051
In silico Approaches for the Design and Optimization of Interfering Peptides Against Protein-Protein Interactions. PMID:33996914
Construction of Unified Human Antimicrobial and Immunomodulatory Peptide Database and Examination of Antimicrobial and Immunomodulatory Peptides in Alzheimer's Disease Using Network Analysis of Proteomics Datasets. PMID:33995478
Dynamic gene expression in salivary glands of the cat flea during Rickettsia felis infection. PMID:33770162
Molecular engineering of antimicrobial peptides: microbial targets, peptide motifs and translation opportunities. PMID:33495702
The Interfacial Interactions of Glycine and Short Glycine Peptides in Model Membrane Systems. PMID:33375246
Identification of biomarkers for the accurate and sensitive diagnosis of three bacterial pneumonia pathogens using in silico approaches. PMID:33218302
Antimicrobial Peptide Induced-Stress Renders Staphylococcus aureus Susceptible to Toxic Nucleoside Analogs. PMID:33133056
Spotlight on the Selected New Antimicrobial Innate Immune Peptides Discovered During 2015-2019. PMID:33092508
A bioinformatic study of antimicrobial peptides identified in the Black Soldier Fly (BSF) Hermetia illucens (Diptera: Stratiomyidae). PMID:33037295
Sequence Permutation Generates Peptides with Different Antimicrobial and Antibiofilm Activities. PMID:32992772
Generating Ampicillin-Level Antimicrobial Peptides with Activity-Aware Generative Adversarial Networks. PMID:32954133
Plant Antimicrobial Peptides: State of the Art, In Silico Prediction and Perspectives in the Omics Era. PMID:32952397
Leveraging orthogonal mass spectrometry based strategies for comprehensive sequencing and characterization of ribosomal antimicrobial peptide natural products. PMID:32929442
Structural and Molecular Docking Analytical Studies of the Predicted Ligand Binding Sites of Cadherin-1 in Cancer Prognostics. PMID:32821128
Bioinformatic Analysis of 1000 Amphibian Antimicrobial Peptides Uncovers Multiple Length-Dependent Correlations for Peptide Design and Prediction. PMID:32784626
Cathelicidin LL-37: A new important molecule in the pathophysiology of systemic lupus erythematosus. PMID:32743514
Two distinct amphipathic peptide antibiotics with systemic efficacy. PMID:32723829
Ten-Year Research Update Review: Antiviral Activities from Marine Organisms. PMID:32645994
A Novel Antimicrobial Peptide (Kassinatuerin-3) Isolated from the Skin Secretion of the African Frog, Kassina senegalensis. PMID:32630734
Diversity of Linear Non-Ribosomal Peptide in Biocontrol Fungi. PMID:32408496
Insilico Alpha-Helical Structural Recognition of Temporin Antimicrobial Peptides and Its Interactions with Middle East Respiratory Syndrome-Coronavirus. PMID:32206049
An automatic representation of peptides for effective antimicrobial activity classification. PMID:32180904
Structural Analysis and Design of Chionodracine-Derived Peptides Using Circular Dichroism and Molecular Dynamics Simulations. PMID:32092980
Anti-Infectives Restore ORKAMBI® Rescue of F508del-CFTR Function in Human Bronchial Epithelial Cells Infected with Clinical Strains of P. aeruginosa. PMID:32092967
PlantPepDB: A manually curated plant peptide database. PMID:32042035
Revisiting the Interaction of Melittin with Phospholipid Bilayers: The Effects of Concentration and Ionic Strength. PMID:31979376
Octominin: A Novel Synthetic Anticandidal Peptide Derived from Defense Protein of Octopus minor. PMID:31952292
Antifungal Activity and Physicochemical Properties of a Novel Antimicrobial Protein AMP-17 from Musca domestica. PMID:31880884
Whole-Genome Approach to Understanding the Mechanism of Action of a Histatin 5-Derived Peptide. PMID:31843998
ADAPTABLE: a comprehensive web platform of antimicrobial peptides tailored to the user's research. PMID:31740563
Antimicrobial Peptides as Anti-Infective Agents in Pre-Post-Antibiotic Era? PMID:31739573
Meta-iAVP: A Sequence-Based Meta-Predictor for Improving the Prediction of Antiviral Peptides Using Effective Feature Representation. PMID:31731751
Computational screening of antimicrobial peptides for Acinetobacter baumannii. PMID:31577808
In Silico Identification of Antimicrobial Peptides in the Proteomes of Goat and Sheep Milk and Feta Cheese. PMID:31546575
Collection of antimicrobial peptides database and its derivatives: Applications and beyond. PMID:31441165
Differential expression of endometrial toll-like receptors (TLRs) and antimicrobial peptides (AMPs) in the buffalo (Bubalus bubalis) with endometritis. PMID:31407222
The antimicrobial peptide database provides a platform for decoding the design principles of naturally occurring antimicrobial peptides. PMID:31361941
Ω76: A designed antimicrobial peptide to combat carbapenem- and tigecycline-resistant Acinetobacter baumannii. PMID:31355341
Modulation of antimicrobial potency of human cathelicidin peptides against the ESKAPE pathogens and in vivo efficacy in a murine catheter-associated biofilm model. PMID:31319057
LFB: A Novel Antimicrobial Brevinin-Like Peptide from the Skin Secretion of the Fujian Large Headed Frog, Limnonectes fujianensi. PMID:31234333
An advanced approach to identify antimicrobial peptides and their function types for penaeus through machine learning strategies. PMID:31182007
Machine learning antimicrobial peptide sequences: Some surprising variations on the theme of amphiphilic assembly. PMID:31093008
Metal Binding Antimicrobial Peptides in Nanoparticle Bio-functionalization: New Heights in Drug Delivery and Therapy. PMID:31001788
Heterologous Machine Learning for the Identification of Antimicrobial Activity in Human-Targeted Drugs. PMID:30935109
Encodings and models for antimicrobial peptide classification for multi-resistant pathogens. PMID:30867681
Antimicrobial Polymers for Additive Manufacturing. PMID:30857355
Interaction of two antitumor peptides with membrane lipids - Influence of phosphatidylserine and cholesterol on specificity for melanoma cells. PMID:30682171
Mechanistic Landscape of Membrane-Permeabilizing Peptides. PMID:30624911
Genetic analysis of signal peptides in amphibian antimicrobial secretions. PMID:30555070
Antibacterial properties of the pituitary adenylate cyclase-activating polypeptide: A new human antimicrobial peptide. PMID:30462698
Effects of D-Lysine Substitutions on the Activity and Selectivity of Antimicrobial Peptide CM15. PMID:30405905
dbAMP: an integrated resource for exploring antimicrobial peptides with functional activities and physicochemical properties on transcriptome and proteome data. PMID:30380085
Efflux pumps and antimicrobial resistance: Paradoxical components in systems genomics. PMID:30031023
Insights into Membrane Translocation of Protegrin Antimicrobial Peptides by Multistep Molecular Dynamics Simulations. PMID:29978143
Synthesis and activity of a diselenide bond mimetic of the antimicrobial protein caenopore-5. PMID:29899924
Antibacterial, antifungal, anticancer activities and structural bioinformatics analysis of six naturally occurring temporins. PMID:29842923
What Can Pleiotropic Proteins in Innate Immunity Teach Us about Bioconjugation and Molecular Design? PMID:29771496
StraPep: a structure database of bioactive peptides. PMID:29688386
Identification and screening of potent antimicrobial peptides in arthropod genomes. PMID:29501691
Staphylococcal Osteomyelitis: Disease Progression, Treatment Challenges, and Future Directions. PMID:29444953
Computational antimicrobial peptide design and evaluation against multidrug-resistant clinical isolates of bacteria. PMID:29259134
The rumen microbiome: an underexplored resource for novel antimicrobial discovery. PMID:29214045
What can machine learning do for antimicrobial peptides, and what can antimicrobial peptides do for machine learning? PMID:29147555
Current treatment options and the role of peptides as potential therapeutic components for Middle East Respiratory Syndrome (MERS): A review. PMID:28864360
Machine learning-enabled discovery and design of membrane-active peptides. PMID:28728899
Individual and Combined Effects of Engineered Peptides and Antibiotics on Pseudomonas aeruginosa Biofilms. PMID:28672834
Host defense antimicrobial peptides as antibiotics: design and application strategies. PMID:28399505
A New Synthetic Peptide Having Two Target of Antibacterial Action in E. coli ML35. PMID:28066341
Antimicrobial Peptides Share a Common Interaction Driven by Membrane Line Tension Reduction. PMID:27851941
Characterization of the antimicrobial peptide family defensins in the Tasmanian devil (Sarcophilus harrisii), koala (Phascolarctos cinereus), and tammar wallaby (Macropus eugenii). PMID:27838759
Sarkosyl-Induced Helical Structure of an Antimicrobial Peptide GW-Q6 Plays an Essential Role in the Binding of Surface Receptor OprI in Pseudomonas aeruginosa. PMID:27727309
Specific Anti-Leukemic Activity of the Peptide Warnericin RK and Analogues and Visualization of Their Effect on Cancer Cells by Chemical Raman Imaging. PMID:27598770
Convergent evolution of defensin sequence, structure and function. PMID:27557668
Antimicrobial Protein Candidates from the Thermophilic Geobacillus sp. Strain ZGt-1: Production, Proteomics, and Bioinformatics Analysis. PMID:27548162
S100A12 Is Part of the Antimicrobial Network against Mycobacterium leprae in Human Macrophages. PMID:27355424
A peptide from human β thymosin as a platform for the development of new anti-biofilm agents for Staphylococcus spp. and Pseudomonas aeruginosa. PMID:27339305
Insights into Antimicrobial Peptides from Spiders and Scorpions. PMID:27165405
Prediction of anticancer peptides against MCF-7 breast cancer cells from the peptidomes of Achatina fulica mucus fractions. PMID:26862373
Natural antimicrobial peptides as promising anti-HIV candidates. PMID:26834391
Design and Synthesis of a Novel Cationic Peptide with Potent and Broad-Spectrum Antimicrobial Activity. PMID:26688811
Identification of a novel antimicrobial peptide from amphioxus Branchiostoma japonicum by in silico and functional analyses. PMID:26680226
APD3: the antimicrobial peptide database as a tool for research and education. PMID:26602694
Antimicrobial Peptides from Plants. PMID:26580629
Quasiracemate Crystal Structures of Magainin 2 Derivatives Support the Functional Significance of the Phenylalanine Zipper Motif. PMID:26369301
The Potential Use of Natural and Structural Analogues of Antimicrobial Peptides in the Fight against Neglected Tropical Diseases. PMID:26305243
Latarcins: versatile spider venom peptides. PMID:26286896
Small lipopeptides possess anti-biofilm capability comparable to daptomycin and vancomycin. PMID:26257894
Virocidal activity of Egyptian scorpion venoms against hepatitis C virus. PMID:25889296
Biologically active and antimicrobial peptides from plants. PMID:25815307
Antimicrobial peptides in 2014. PMID:25806720
Prediction of antimicrobial peptides based on sequence alignment and support vector machine-pairwise algorithm utilizing LZ-complexity. PMID:25802839
Whole-genome sequence of the Tibetan frog Nanorana parkeri and the comparative evolution of tetrapod genomes. PMID:25733869
Asp residues of βDELSEED-motif are required for peptide binding in the Escherichia coli ATP synthase. PMID:25603139
Antimicrobial peptides: a new class of antimalarial drugs? PMID:25566072
Improved methods for classification, prediction, and design of antimicrobial peptides. PMID:25555720
Paracentrin 1, a synthetic antimicrobial peptide from the sea-urchin Paracentrotus lividus, interferes with staphylococcal and Pseudomonas aeruginosa biofilm formation. PMID:25401078
AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides. PMID:25392419
Distinct profiling of antimicrobial peptide families. PMID:25388148
NKLP27: a teleost NK-lysin peptide that modulates immune response, induces degradation of bacterial DNA, and inhibits bacterial and viral infection. PMID:25180858
New milk protein-derived peptides with potential antimicrobial activity: an approach based on bioinformatic studies. PMID:25141106
Balteatide: a novel antimicrobial decapeptide from the skin secretion of the purple-sided leaf frog, Phyllomedusa baltea. PMID:25054164
Structural insights into and activity analysis of the antimicrobial peptide myxinidin. PMID:24957834
Challenges and future prospects of antibiotic therapy: from peptides to phages utilization. PMID:24860506
Killing of melanoma cells and their metastases by human lactoferricin derivatives requires interaction with the cancer marker phosphatidylserine. PMID:24838743
Human antimicrobial peptides and proteins. PMID:24828484
Antimicrobial peptides and induced membrane curvature: geometry, coordination chemistry, and molecular engineering. PMID:24778573
Prediction of linear cationic antimicrobial peptides based on characteristics responsible for their interaction with the membranes. PMID:24730612
Antioxidant, antibacterial, and cytoprotective activity of agathi leaf protein. PMID:24616824
Post-translational Modifications of Natural Antimicrobial Peptides and Strategies for Peptide Engineering. PMID:24511461
The Brassicaceae-specific EWR1 gene provides resistance to vascular wilt pathogens. PMID:24505441
High-quality 3D structures shine light on antibacterial, anti-biofilm and antiviral activities of human cathelicidin LL-37 and its fragments. PMID:24463069
GSL2 over-expression confers resistance to Pectobacterium atrosepticum in potato. PMID:24370960
Structural location determines functional roles of the basic amino acids of KR-12, the smallest antimicrobial peptide from human cathelicidin LL-37. PMID:24307932
Database-Guided Discovery of Potent Peptides to Combat HIV-1 or Superbugs. PMID:24276259
Topical antimicrobials for burn infections - an update. PMID:24215506
Little peptide, big effects: the role of LL-37 in inflammation and autoimmune disease. PMID:24185823
Expression of an engineered heterologous antimicrobial peptide in potato alters plant development and mitigates normal abiotic and biotic responses. PMID:24147012
Evidence for phenylalanine zipper-mediated dimerization in the X-ray crystal structure of a magainin 2 analogue. PMID:24102563
Vitellogenin from the silkworm, Bombyx mori: an effective anti-bacterial agent. PMID:24058454
Midkine in host defence. PMID:24024937
Localized permeabilization of E. coli membranes by the antimicrobial peptide Cecropin A. PMID:23988088
Influenza virus A M2 protein generates negative Gaussian membrane curvature necessary for budding and scission. PMID:23962302
High-yield soluble expression and simple purification of the antimicrobial peptide OG2 using the intein system in Escherichia coli. PMID:23936842
Interplay among subunit identity, subunit proportion, chain length, and stereochemistry in the activity profile of sequence-random peptide mixtures. PMID:23909610
PepBind: a comprehensive database and computational tool for analysis of protein-peptide interactions. PMID:23896518
Membrane perturbation action mode and structure-activity relationships of Protonectin, a novel antimicrobial peptide from the venom of the neotropical social wasp Agelaia pallipes pallipes. PMID:23836163
LAMP: A Database Linking Antimicrobial Peptides. PMID:23825543
Immune mediators of sea-cucumber Holothuria tubulosa (Echinodermata) as source of novel antimicrobial and anti-staphylococcal biofilm agents. PMID:23800329
Identification of a novel antimicrobial peptide from human hepatitis B virus core protein arginine-rich domain (ARD). PMID:23785287
Activity determinants of helical antimicrobial peptides: a large-scale computational study. PMID:23776672
A critical evaluation of random copolymer mimesis of homogeneous antimicrobial peptides. PMID:23750051
Enhanced efficacy of synergistic combinations of antimicrobial peptides with caspofungin versus Candida albicans in insect and murine models of systemic infection. PMID:23572153
Peptide design for antimicrobial and immunomodulatory applications. PMID:23553602
ATP synthase: a molecular therapeutic drug target for antimicrobial and antitumor peptides. PMID:23432591
Identification and functional characterization of a novel monotreme- specific antibacterial protein expressed during lactation. PMID:23326486
Class IIa bacteriocins: diversity and new developments. PMID:23222636
Two hits are better than one: membrane-active and DNA binding-related double-action mechanism of NK-18, a novel antimicrobial peptide derived from mammalian NK-lysin. PMID:23089755
Integrating "omics" Technologies to Conceptualize Dynamic Antimicrobial Peptide Responses. PMID:23060875
The Importance of Amino Acid Composition in Natural AMPs: An Evolutional, Structural, and Functional Perspective. PMID:23060873
Structural and functional characterization of a multifunctional alanine-rich peptide analogue from Pleuronectes americanus. PMID:23056574
Towards the improved discovery and design of functional peptides: common features of diverse classes permit generalized prediction of bioactivity. PMID:23056189
Antitumor and angiostatic activities of the antimicrobial peptide dermaseptin B2. PMID:23028527
The Continuing Evolution of HIV-1 Therapy: Identification and Development of Novel Antiretroviral Agents Targeting Viral and Cellular Targets. PMID:22848825
Ab initio design of potent anti-MRSA peptides based on database filtering technology. PMID:22803960
The use of therapeutic peptides to target and to kill cancer cells. PMID:22725698
Cathelicidin LL-37: an antimicrobial peptide with a role in inflammatory skin disease. PMID:22577261
Anti-HIV-1 activity of a new scorpion venom peptide derivative Kn2-7. PMID:22536342
Coleopteran antimicrobial peptides: prospects for clinical applications. PMID:22500175
EnzyBase: a novel database for enzybiotic studies. PMID:22489867
A novel PCR-based method for high throughput prokaryotic expression of antimicrobial peptide genes. PMID:22439858
Identification, purification and characterization of laterosporulin, a novel bacteriocin produced by Brevibacillus sp. strain GI-9. PMID:22403615
Role of Charged Residues in the Catalytic Sites of Escherichia coli ATP Synthase. PMID:22312470
Control of pH responsive peptide self-association during endocytosis is required for effective gene transfer. PMID:22226847
Structure, dynamics, and antimicrobial and immune modulatory activities of human LL-23 and its single-residue variants mutated on the basis of homologous primate cathelicidins. PMID:22185690
Designing antimicrobial peptides: form follows function. PMID:22173434
Lactoferricin B inhibits the phosphorylation of the two-component system response regulators BasR and CreB. PMID:22138548
Decoding the functional roles of cationic side chains of the major antimicrobial region of human cathelicidin LL-37. PMID:22083479
Identification and structural characterization of novel cyclotide with activity against an insect pest of sugar cane. PMID:22074926
Functional analysis of C-type lysozyme in penaeid shrimp. PMID:22069322
Embryo protection in contemporary immunology: Why bacteria matter. PMID:21966549
Membrane-active host defense peptides--challenges and perspectives for the development of novel anticancer drugs. PMID:21945565
Solution and solid-state NMR structural studies of antimicrobial peptides LPcin-I and LPcin-II. PMID:21889457
Antimicrobial peptides and proteins of the horse--insights into a well-armed organism. PMID:21888650
Ctriporin, a new anti-methicillin-resistant Staphylococcus aureus peptide from the venom of the scorpion Chaerilus tricostatus. PMID:21876042
Characterization of a potent antimicrobial lipopeptide via coarse-grained molecular dynamics. PMID:21819964
Disulfide-stabilized helical hairpin structure and activity of a novel antifungal peptide EcAMP1 from seeds of barnyard grass (Echinochloa crus-galli). PMID:21561864
Prediction of antimicrobial peptides based on sequence alignment and feature selection methods. PMID:21533231
Criterion for amino acid composition of defensins and antimicrobial peptides based on geometry of membrane destabilization. PMID:21473577
Antifungal activity of Wickerhamomyces anomalus and Lactobacillus plantarum during sourdough fermentation: identification of novel compounds and long-term effect during storage of wheat bread. PMID:21441340
Antibacterial peptides from plants: what they are and how they probably work. PMID:21403856
Survival strategies of yeast and filamentous fungi against the antifungal protein AFP. PMID:21343301
Antimicrobial peptides: successes, challenges and unanswered questions. PMID:21225255
Primary structure and cellular localization of callinectin, an antimicrobial peptide from the blue crab. PMID:21115038
Molecular dynamics simulations of three protegrin-type antimicrobial peptides: interplay between charges at the termini, β-sheet structure and amphiphilic interactions. PMID:21113420
Permeabilization of fungal hyphae by the plant defensin NaD1 occurs through a cell wall-dependent process. PMID:20861017
Describing the mechanism of antimicrobial peptide action with the interfacial activity model. PMID:20698568
Medicinal chemistry of ATP synthase: a potential drug target of dietary polyphenols and amphibian antimicrobial peptides. PMID:20586714
Conventional and unconventional antimicrobials from fish, marine invertebrates and micro-algae. PMID:20479976
Bacteriocin as weapons in the marine animal-associated bacteria warfare: inventory and potential applications as an aquaculture probiotic. PMID:20479972
Communication: Antimicrobial Activity of SMAP28 with a Targeting Domain for Porphyromonas gingivalis. PMID:20454638
Molecular analysis and recombinant expression of bovine neutrophil β-defensin 12 and its antimicrobial activity. PMID:20349279
Chromogranin A detection in saliva of type 2 diabetes patients. PMID:20192923
The primary transcriptome of the major human pathogen Helicobacter pylori. PMID:20164839
AntiBP2: improved version of antibacterial peptide prediction. PMID:20122190
Inhibition of Escherichia coli ATP synthase by amphibian antimicrobial peptides. PMID:20100509
Identification of novel human immunodeficiency virus type 1-inhibitory peptides based on the antimicrobial peptide database. PMID:20086159
Defensins as anti-inflammatory compounds and mucosal adjuvants. PMID:20020832
Surfactant protein B propeptide contains a saposin-like protein domain with antimicrobial activity at low pH. PMID:20007532
CAMP: a useful resource for research on antimicrobial peptides. PMID:19923233
A theoretical approach to spot active regions in antimicrobial proteins. PMID:19906288
Fluorescence and UV resonance Raman study of peptide-vesicle interactions of human cathelicidin LL-37 and its F6W and F17W mutants. PMID:19894716
Comparative molecular dynamics simulation studies of protegrin-1 monomer and dimer in two different lipid bilayers. PMID:19651037
Lipid segregation explains selective toxicity of a series of fragments derived from the human cathelicidin LL-37. PMID:19581460
Myxinidin, a novel antimicrobial peptide from the epidermal mucus of hagfish, Myxine glutinosa L. PMID:19330556
Killing of trypanosomatid parasites by a modified bovine host defense peptide, BMAP-18. PMID:19190729
APD2: the updated antimicrobial peptide database and its application in peptide design. PMID:18957441
PhytAMP: a database dedicated to antimicrobial plant peptides. PMID:18836196
Effects of cations and pH on antimicrobial activity of thanatin and s-thanatin against Escherichia coli ATCC25922 and B. subtilis ATCC 21332. PMID:18810542
Mucroporin, the first cationic host defense peptide from the venom of Lychas mucronatus. PMID:18779362
Structure-function studies of Bubalus bubalis lingual antimicrobial peptide analogs. PMID:18651233
Anti-human immunodeficiency virus type 1 activities of antimicrobial peptides derived from human and bovine cathelicidins. PMID:18591279
Antibody complementarity-determining regions (CDRs) can display differential antimicrobial, antiviral and antitumor activities. PMID:18545659
High-level expression and novel purification strategy of recombinant thanatin analog in Escherichia coli. PMID:18535859
Comparative analysis of septic injury-inducible genes in phylogenetically distant model organisms of regeneration and stem cell research, the planarian Schmidtea mediterranea and the cnidarian Hydra vulgaris. PMID:18439314
Host defense peptides in wound healing. PMID:18385817
BACTIBASE: a new web-accessible database for bacteriocin characterization. PMID:17941971
Beta-sheet pore-forming peptides selected from a rational combinatorial library: mechanism of pore formation in lipid vesicles and activity in biological membranes. PMID:17918962
PepBank--a database of peptides based on sequence text mining and public peptide data sources. PMID:17678535
Analysis and prediction of antibacterial peptides. PMID:17645800
Casein fermentate of Lactobacillus animalis DPC6134 contains a range of novel propeptide angiotensin-converting enzyme inhibitors. PMID:17483275
Antiplasmodial activity of lauryl-lysine oligomers. PMID:17307975
A Fourier transformation based method to mine peptide space for antimicrobial activity. PMID:17118141
Defensins knowledgebase: a manually curated database and information source focused on the defensins family of antimicrobial peptides. PMID:17090586
Peptide antimicrobial agents. PMID:16847082
Casein-derived antimicrobial peptides generated by Lactobacillus acidophilus DPC6026. PMID:16517684
Antagonists of Hsp16.3, a low-molecular-weight mycobacterial chaperone and virulence factor, derived from phage-displayed peptide libraries. PMID:16269776
A continent of plant defense peptide diversity: cyclotides in Australian Hybanthus (Violaceae). PMID:16199617
Rational combinatorial design of pore-forming beta-sheet peptides. PMID:16020534

Tags:

Tags
More detailed information about this field from each metasource.

antimicrobial
metasource: Fairsharing.org
version: FAIRsharing.org: APD; Antimicrobial Peptide Database; DOI: https://doi.org/10.25504/FAIRsharing.ctwd7b; Last edited: June 25, 2021, 2:44 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

classification
metasource: Fairsharing.org
version: FAIRsharing.org: APD; Antimicrobial Peptide Database; DOI: https://doi.org/10.25504/FAIRsharing.ctwd7b; Last edited: June 25, 2021, 2:44 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

computational predictions
metasource: Fairsharing.org
version: FAIRsharing.org: APD; Antimicrobial Peptide Database; DOI: https://doi.org/10.25504/FAIRsharing.ctwd7b; Last edited: June 25, 2021, 2:44 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

peptide
metasource: Fairsharing.org
version: FAIRsharing.org: APD; Antimicrobial Peptide Database; DOI: https://doi.org/10.25504/FAIRsharing.ctwd7b; Last edited: June 25, 2021, 2:44 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

protein
metasource: Fairsharing.org
version: FAIRsharing.org: APD; Antimicrobial Peptide Database; DOI: https://doi.org/10.25504/FAIRsharing.ctwd7b; Last edited: June 25, 2021, 2:44 p.m.; Last accessed: Jan 03 2022 7:07 p.m.

other molecular biology databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

drugs and drug design
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

animal
metasource: re3data.org
version: re3data.org: Antimicrobial Peptide Database; editing status 2019-02-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3023M last accessed: 2022-11-04

bacteria
metasource: re3data.org
version: re3data.org: Antimicrobial Peptide Database; editing status 2019-02-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3023M last accessed: 2022-11-04

fungus
metasource: re3data.org
version: re3data.org: Antimicrobial Peptide Database; editing status 2019-02-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3023M last accessed: 2022-11-04

host defense peptides
metasource: re3data.org
version: re3data.org: Antimicrobial Peptide Database; editing status 2019-02-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3023M last accessed: 2022-11-04

immune system
metasource: re3data.org
version: re3data.org: Antimicrobial Peptide Database; editing status 2019-02-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3023M last accessed: 2022-11-04

plant
metasource: re3data.org
version: re3data.org: Antimicrobial Peptide Database; editing status 2019-02-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3023M last accessed: 2022-11-04

protozoa
metasource: re3data.org
version: re3data.org: Antimicrobial Peptide Database; editing status 2019-02-26; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3023M last accessed: 2022-11-04

antimicrobial classification computational predictions peptide protein molecular biology drug animal bacteria fungus host defense peptides immune system plant protozoa

More to explore:

1/20

Previous Next

Need help integrating and/or managing biomedical data?

Webpage:

Licence:

More to explore:

1/20

Dragon Antimicrobial Peptide Database

Antimicrobial Peptide Database (AMPed)

ACEpepDB: Peptide Database

DRAMP

Defensins Knowledgebase

DBAASP

Bactibase: database dedicated to bacteriocins

Antimicrobial Combination Networks

Minimum Information About a Peptide Array Experiment

Database of MHC Ligands and Peptide Motifs

MEGaRes

AVPdb

PepX

LABiocin database

Biofilm-active AMPs database

SysteMHC Atlas

Propedia

B-AMP

ARS

Antimicrobial prescribing surveillance data during the COVID-19 pandemic