LLPSDB

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LLPSDB

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:25.363336

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llpsdb

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:25.363336

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Other names: llpsdb

A database of proteins undergoing liquid-liquid phase separation in vitro. LLPSDB contains LLPS related proteins together with the corresponding phase separation conditions validated by experiments.

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Publications

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LLPSDB: a database of proteins undergoing liquid-liquid phase separation in vitro
PMID: 31906602

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:25.363336

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• LLPSDB: a database of proteins undergoing liquid-liquid phase separation in vitro PubMed citations: 31.

  31 articles citing: LLPSDB: a database of proteins undergoing liquid-liquid phase separation in vitro

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  A hydrodynamic instability drives protein droplet formation on microtubules to nucleate branches. PMID:35211183

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  Prediction of liquid-liquid phase separating proteins using machine learning. PMID:35168563

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  Databases for intrinsically disordered proteins. PMID:35102880

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  LLPSDB v2.0: an updated database of proteins undergoing liquid-liquid phase separation in vitro. PMID:35025997

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  Transcription Regulators and Membraneless Organelles Challenges to Investigate Them. PMID:34884563

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  FuzDB: a new phase in understanding fuzzy interactions. PMID:34791357

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  'RNA modulation of transport properties and stability in phase-separated condensates. PMID:34762868

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  Site-specific phosphorylation of PSD-95 dynamically regulates the postsynaptic density as observed by phase separation. PMID:34761188

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  Liquid-Liquid Phase Separation: Unraveling the Enigma of Biomolecular Condensates in Microbial Cells. PMID:34759902

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  CompoDynamics: a comprehensive database for characterizing sequence composition dynamics. PMID:34718745

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  RNAPhaSep: a resource of RNAs undergoing phase separation. PMID:34718740

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  RPS: a comprehensive database of RNAs involved in liquid-liquid phase separation. PMID:34718734

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  Targeted modulation of protein liquid-liquid phase separation by evolution of amino-acid sequence. PMID:34428231

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  Insight into membraneless organelles and their associated proteins: Drivers, Clients and Regulators. PMID:34377363

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  Liquid-liquid phase separation: a principal organizer of the cell's biochemical activity architecture. PMID:34373114

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  Solubility Parameters of Amino Acids on Liquid-Liquid Phase Separation and Aggregation of Proteins. PMID:34222258

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  A Tale of Loops and Tails: The Role of Intrinsically Disordered Protein Regions in R-Loop Recognition and Phase Separation. PMID:34179096

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  DNA-binding domain as the minimal region driving RNA-dependent liquid-liquid phase separation of androgen receptor. PMID:33938068

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  Recent developments in microfluidic synthesis of artificial cell-like polymersomes and liposomes for functional bioreactors. PMID:33833845

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  Learning the molecular grammar of protein condensates from sequence determinants and embeddings. PMID:33827920

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  Integration of Data from Liquid-Liquid Phase Separation Databases Highlights Concentration and Dosage Sensitivity of LLPS Drivers. PMID:33809541

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  Computational Screening of Phase-separating Proteins. PMID:33610793

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  Phase separation of DNA: From past to present. PMID:33582138

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  Computational resources for identifying and describing proteins driving liquid-liquid phase separation. PMID:33517364

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  Widespread occurrence of the droplet state of proteins in the human proteome. PMID:33318217

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  Liquid-Liquid Phase Separation by Intrinsically Disordered Protein Regions of Viruses: Roles in Viral Life Cycle and Control of Virus-Host Interactions. PMID:33260713

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  MobiDB: intrinsically disordered proteins in 2021. PMID:33237329

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  Protein Databases Related to Liquid-Liquid Phase Separation. PMID:32947964

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  The pathophysiology of neurodegenerative disease: Disturbing the balance between phase separation and irreversible aggregation. PMID:32828466

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  Phosphorylated tau interactome in the human Alzheimer's disease brain. PMID:32812023

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  New technologies to analyse protein function: an intrinsic disorder perspective. PMID:32089835

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pathology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:25.363336

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physiology

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:25.363336

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protein modifications

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:25.363336

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rna

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:25.363336

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small molecules

metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:25.363336

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pathology physiology protein modifications rna small molecule