GreenCircRNA
A database for plant circRNAs that act as miRNA decoys. Circular RNAs (circRNAs) are a novel type of RNAs that form covalently closed loop structures with neither 5'- 3' polarities nor polyadenylated tails. GreenCircRNA(v1.0) is the most comprehensive database containing 213,494 circRNA informations from over 4100 RNA-seq datasets across 69 different species. Based on these candidate circRNAs, we futher predicted them acting as miRNA decoys and their potential networks involving circRNA-miRNA-mRNA in the corresponding species. This database allows users not only to search, browse and freely download circRNAs with relative informations, such as full-length, graphical, parental gene and interaction network, but also provide some tools for analyze circRNAs. A Wiki-database of plant CircRNAs(v1.0).
Description
More detailed information about this field from each metasource.
A database for plant circRNAs that act as miRNA decoys. Circular RNAs (circRNAs) are a novel type of RNAs that form covalently closed loop structures with neither 5'- 3' polarities nor polyadenylated tails. GreenCircRNA(v1.0) is the most comprehensive database containing 213,494 circRNA informations from over 4100 RNA-seq datasets across 69 different species. Based on these candidate circRNAs, we futher predicted them acting as miRNA decoys and their potential networks involving circRNA-miRNA-mRNA in the corresponding species. This database allows users not only to search, browse and freely download circRNAs with relative informations, such as full-length, graphical, parental gene and interaction network, but also provide some tools for analyze circRNAs. A Wiki-database of plant CircRNAs(v1.0).
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:53.383322
Webpage:
http://greencirc.cnWebpage
More detailed information about this field from each metasource.
Publications:
Publications
More detailed information about this field from each metasource.
GreenCircRNA: a database for plant circRNAs that act as miRNA decoys
PMID: 32510565
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:53.383322
Publications
More detailed information about this field from each metasource.
GreenCircRNA: a database for plant circRNAs that act as miRNA decoys
PMID: 32510565
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:53.383322
-
GreenCircRNA: a database for plant circRNAs that act as miRNA decoys
PubMed citations: 4.
4 articles citing: GreenCircRNA: a database for plant circRNAs that act as miRNA decoys
Evaluation of CircRNA Sequence Assembly Methods Using Long Reads. PMID:35237301
MicroRNA-mediated bioengineering for climate-resilience in crops. PMID:34747296
Circular RNAs Repertoire and Expression Profile during Brassica rapa Pollen Development. PMID:34638635
Sorghum's Whole-Plant Transcriptome and Proteome Responses to Drought Stress: A Review. PMID:34357076
Tags:
Tags
More detailed information about this field from each metasource.
functional, regulatory and non-coding rna
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:53.383322
plant biology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:53.383322
gene transcripts
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:53.383322
rna-seq
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:53.383322
statistics and probability
metasource: bio.tools
version: extracted_at: 2022-11-04T11:28:53.383322
Tags
More detailed information about this field from each metasource.
functional, regulatory and non-coding rna
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:53.383322
plant biology
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:53.383322
gene transcripts
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:53.383322
rna-seq
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:53.383322
statistics and probability
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:28:53.383322
functional, regulatory and non-coding rna plant biology gene transcripts rna sequence statistics and probability
Need help integrating and/or managing biomedical data?