BioModels Ontology
Names
More detailed information about this field from each metasource.
BioModels Ontology
metasource: Fairsharing.org
version: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 21 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/BIOMODELS
BIOMODELS
metasource: Biontology / Bioportal
version: 21 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/BIOMODELS
Names
More detailed information about this field from each metasource.
BioModels Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 21 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/BIOMODELS
BIOMODELS
metasource: Biontology / Bioportalversion: 21 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/BIOMODELS
Names
More detailed information about this field from each metasource.
BioModels Ontology
metasource: Fairsharing.orgversion: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
metasource: Biontology / Bioportal
version: 21 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/BIOMODELS
BIOMODELS
metasource: Biontology / Bioportalversion: 21 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/BIOMODELS
The BioModels Ontology is an OWL Representation of the models in the BioModels repository. This resource has not been updated recently within BioPortal, and no official homepage can be found, therefore we have marked its status as Uncertain. Please get in touch with us if you have any information on this project.
Description
More detailed information about this field from each metasource.
The BioModels Ontology is an OWL Representation of the models in the BioModels repository. This resource has not been updated recently within BioPortal, and no official homepage can be found, therefore we have marked its status as Uncertain. Please get in touch with us if you have any information on this project.
metasource: Fairsharing.orgversion: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
OWL Representation of the models in the BioModels repository.
metasource: Biontology / Bioportalversion: 21 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/BIOMODELS
Webpage:
http://bioportal.bioontology.org/ontologies/BIOMODELSWebpage
More detailed information about this field from each metasource.
http://bioportal.bioontology.org/ontologies/BIOMODELS
metasource: Fairsharing.orgversion: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
https://code.google.com/p/sbmlharvester/
metasource: Biontology / Bioportalversion: 21 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/BIOMODELS
Publications:
Publications
More detailed information about this field from each metasource.
Integrating systems biology models and biomedical ontologies
PMID: 21835028
metasource: Fairsharing.org
version: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
http://www.biomedcentral.com/1752-0509/5/124
metasource: Biontology / Bioportal
version: 21 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/BIOMODELS
Publications
More detailed information about this field from each metasource.
Integrating systems biology models and biomedical ontologies
PMID: 21835028
metasource: Fairsharing.org
version: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
http://www.biomedcentral.com/1752-0509/5/124
metasource: Biontology / Bioportalversion: 21 extracted_at: 2022-11-04T11:10:15.597147, http://bioportal.bioontology.org/ontologies/BIOMODELS
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Integrating systems biology models and biomedical ontologies
PubMed citations: 26.
26 articles citing: Integrating systems biology models and biomedical ontologies
Recent advances in biomedical simulations: a manifesto for model engineering. PMID:30881691
Quantitative evaluation of ontology design patterns for combining pathology and anatomy ontologies. PMID:30858527
OligoPVP: Phenotype-driven analysis of individual genomic information to prioritize oligogenic disease variants. PMID:30279426
The bacterial interlocked process ONtology (BiPON): a systemic multi-scale unified representation of biological processes in prokaryotes. PMID:29169408
Ontological interpretation of biomedical database content. PMID:28651575
Is the crowd better as an assistant or a replacement in ontology engineering? An exploration through the lens of the Gene Ontology. PMID:26873781
Mining Electronic Health Records using Linked Data. PMID:26306276
An empirically derived taxonomy of errors in SNOMED CT. PMID:25954397
Diverse array-designed modes of combination therapies in Fangjiomics. PMID:25864646
The role of ontologies in biological and biomedical research: a functional perspective. PMID:25863278
Combining computational models, semantic annotations and simulation experiments in a graph database. PMID:25754863
Using the wisdom of the crowds to find critical errors in biomedical ontologies: a study of SNOMED CT. PMID:25342179
BioModels linked dataset. PMID:25182954
CSEO - the Cigarette Smoke Exposure Ontology. PMID:25093069
Genome scale modeling in systems biology: algorithms and resources. PMID:24822031
Thematic series on biomedical ontologies in JBMS: challenges and new directions. PMID:24602198
The Semanticscience Integrated Ontology (SIO) for biomedical research and knowledge discovery. PMID:24602174
Ontology-Based Querying with Bio2RDF's Linked Open Data. PMID:23735196
Accelerating cancer systems biology research through Semantic Web technology. PMID:23188758
The Units Ontology: a tool for integrating units of measurement in science. PMID:23060432
Evaluation of research in biomedical ontologies. PMID:22962340
Computational tools for comparative phenomics: the role and promise of ontologies. PMID:22814867
Identifying aberrant pathways through integrated analysis of knowledge in pharmacogenomics. PMID:22711793
OREMPdb: a semantic dictionary of computational pathway models. PMID:22536973
EvoluCode: Evolutionary Barcodes as a Unifying Framework for Multilevel Evolutionary Data. PMID:22267905
Scientific discovery as a combinatorial optimisation problem: how best to navigate the landscape of possible experiments? PMID:22252984 - http://www.biomedcentral.com/1752-0509/5/124
Tags:
Tags
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enzymatic reaction
metasource: Fairsharing.org
version: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
mathematical model
metasource: Fairsharing.org
version: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
modeling and simulation
metasource: Fairsharing.org
version: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
molecular entity
metasource: Fairsharing.org
version: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
network model
metasource: Fairsharing.org
version: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
pathway model
metasource: Fairsharing.org
version: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
Tags
More detailed information about this field from each metasource.
enzymatic reaction
metasource: Fairsharing.orgversion: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
mathematical model
metasource: Fairsharing.orgversion: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
modeling and simulation
metasource: Fairsharing.orgversion: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
molecular entity
metasource: Fairsharing.orgversion: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
network model
metasource: Fairsharing.orgversion: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
pathway model
metasource: Fairsharing.orgversion: FAIRsharing.org: BioModels Ontology; BioModels Ontology; DOI: https://doi.org/10.25504/FAIRsharing.1sgm8q; Last edited: June 22, 2021, 2:23 p.m.; Last accessed: Jan 03 2022 7:11 p.m.
enzymatic reaction mathematical model modeling and simulation molecular entity network model pathway model
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