AffinDB

Minimum Information about a Protein Affinity Reagent

MIAPAR is intended to be used as a guideline for experimentalists who wish to unambiguously describe protein affinity reagents and their protein targets (including but not limited to Ab/Ag interaction ...

Protein Affinity Reagent Controlled Vocabulary

The scopes of molecular interactions and protein affinity reagents are largely overlapping but are also partially unique. This fact is reflected in the PSI-PAR CV, which contains the majority of the t ...

Protein Protein Interaction Inhibition Database

2P2Idb is a hand-curated structural database dedicated to the modulation of protein-protein interactions (PPIs). It includes all interactions for which both the protein-protein and protein-modulator c ...

The Complex Portal

Macromolecular complexes from key model organisms

PSnpBind

PSnpBind is a large database of protein–ligand complexes covering a wide range of binding pocket mutations and small molecules’ landscape. This database can be used as a source of data for different t ...

TCSBN

BioCarta Pathways

Online maps of metabolic and signaling pathways

PIPs

Predicted human protein-protein interactions

CORUM

CORUM is a database that provides a manually curated repository of experimentally characterized protein complexes from mammalian organisms, mainly human (64%), mouse (16%) and rat (12%). Each protein ...

PDB-Ligand

PDB-Ligand is a three dimensional structure database of small molecular ligands that are bound to larger biomolecules deposited in the Protein Data Bank (PDB). One unique feature of PDB-Ligand is that ...

Worldwide Protein Data Bank

The Protein Data Bank (PDB) is an archive of experimentally determined three-dimensional structures of biological macromolecules that serves a global community of researchers, educators, and students. ...

Protein-protein interfaces

Interacting residues in protein-protein interfaces in PDB

Binding MOAD

Binding Mother of All Databases: a database of protein-ligand crystal structures

PDZBase

Protein-protein interactions involving PDZ domains

PINT

The first release of Protein-protein Interactions Thermodynamic Database (PINT) contains more than 1500 data of several thermodynamic parameters along with sequence and structural information, experim ...

Het-PDB Navi

Het-PDB Navi is a database that collects small molecules found in Protein Data Bank (PDB). An atomic reality of protein function is based on interactions between a protein and another molecule. One of ...

prePPI

Predicted and experimentally determined protein-protein interactions for yeast and human

Dockground

Protein-protein interfaces in co-crystallized protein structures

InterDom

Putative protein domain interactions