TAED - The Adaptive Evolution Database

TAED - The Adaptive Evolution Database

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A phylogeny-based tool for comparative genomics

Description

More detailed information about this field from each metasource.

A phylogeny-based tool for comparative genomics

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

Webpage:

http://www.wyomingbioinformatics.org/TAED/

Tags:

Tags

More detailed information about this field from each metasource.

human and other vertebrate genomes

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

model organisms, comparative genomics

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

plant databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

general plant databases

metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657

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The Adaptive Evolution Database

TAED is a database of phylogenetically indexed gene families. It contains multiple sequence alignments from MAFFT1, maximum likelihood phylogenetic trees from PhyML2, bootstrap values for each node, d ...

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Gene indices of human, mouse, zebrafish, Arabidopsis, and Drosophila

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Phylogenetic patterns of genes from the Ensembl database

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Database server for cleansed EST libraries

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Eukaryotic pseudogenes assigned to different protein families

Manteia

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OikoBase

A curated genome expression database of Oikopleura dioica

SPEED

Searchable prototype experimental evolutionary database

CRISPRz

CRISPR single guide RNAs to zebrafish genes

OPTIC

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