Description of Plant Viruses
Names
More detailed information about this field from each metasource.
Description of Plant Viruses
metasource: Fairsharing.org
version: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
DPVweb
metasource: Fairsharing.org
version: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
DPVweb database of plant viruses
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:07.039456
dpvweb
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:07.039456
Names
More detailed information about this field from each metasource.
Description of Plant Viruses
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
DPVweb
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
DPVweb database of plant viruses
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:07.039456
dpvweb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:07.039456
Other names: DPVweb, DPVweb database of plant viruses, dpvweb
Names
More detailed information about this field from each metasource.
Description of Plant Viruses
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
DPVweb
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
DPVweb database of plant viruses
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:07.039456
dpvweb
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:07.039456
DPVweb provides a central source of information about viruses, viroids and satellites of plants, fungi and protozoa. Comprehensive taxonomic information, including brief descriptions of each family and genus, and classified lists of virus sequences are provided. The database also holds detailed, curated, information for all sequences of viruses, viroids and satellites of plants, fungi and protozoa that are complete or that contain at least one complete gene. The database will not be updated with sequence or taxonomic data from Aug 2013.
Description
More detailed information about this field from each metasource.
DPVweb provides a central source of information about viruses, viroids and satellites of plants, fungi and protozoa. Comprehensive taxonomic information, including brief descriptions of each family and genus, and classified lists of virus sequences are provided. The database also holds detailed, curated, information for all sequences of viruses, viroids and satellites of plants, fungi and protozoa that are complete or that contain at least one complete gene. The database will not be updated with sequence or taxonomic data from Aug 2013.
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
DPVweb provides a central source of information about viruses, viroids and satellites of plants, fungi and protozoa. Comprehensive taxonomic information, including brief descriptions of each family and genus, and classified lists of virus sequences are provided. The database also holds detailed, curated, information for all sequences of viruses, viroids and satellites of plants, fungi and protozoa that are complete or that contain at least one complete gene (currently, n~9000). For comparative purposes, it also contains a single representative sequence of all other fully sequenced virus species with an RNA or ssDNA genome. The start and end positions of each feature (gene, non-translated region, etc) have been recorded and checked for accuracy. As far as possible, nomenclature for genes and proteins are standardised within genera and families. Sequences of features (either as DNA or amino acid sequences) can be directly downloaded from the web site in FASTA format. The sequence information can also be accessed via client software for PC computers (freely downloadable from the web site) that enable users to make an easy selection of sequences and features of a chosen virus for further analyses.
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
Information about viruses, viroids and satellites of plants, fungi and protozoa, with some additional data on related animal viruses.
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:07.039456
Webpage:
http://www.dpvweb.netWebpage
More detailed information about this field from each metasource.
http://www.dpvweb.net
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
http://www.dpvweb.net/
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:07.039456
Licence:
Name: DPVweb Copyright informationLicence name
More detailed information about this field from each metasource.
DPVweb Copyright information
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Licence URL
More detailed information about this field from each metasource.
http://www.dpvweb.net/
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
DPVweb: a comprehensive database of plant and fungal virus genes and genomes
PMID: 16381892
metasource: Fairsharing.org
version: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
http://dx.doi.org/10.1093/nar/gkj023
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:07.039456
Publications
More detailed information about this field from each metasource.
DPVweb: a comprehensive database of plant and fungal virus genes and genomes
PMID: 16381892
metasource: Fairsharing.org
version: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
http://dx.doi.org/10.1093/nar/gkj023
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:07.039456
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DPVweb: a comprehensive database of plant and fungal virus genes and genomes
PubMed citations: 28.
28 articles citing: DPVweb: a comprehensive database of plant and fungal virus genes and genomes
Implementation of GA-VirReport, a Web-Based Bioinformatics Toolkit for Post-Entry Quarantine Screening of Virus and Viroids in Plants. PMID:35891459
European primary datasets of alien bacteria and viruses. PMID:35831307
A New Ilarvirus Found in French Hydrangea. PMID:35406923
In Silico Methods for the Identification of Viral-Derived Small Interfering RNAs (vsiRNAs) and Their Application in Plant Genomics. PMID:35325416
Phytosterol metabolism in plant positive-strand RNA virus replication. PMID:34665312
Occurrence of Cotton leaf curl Multan virus and associated betasatellites with leaf curl disease of Bhut-Jolokia chillies (Capsicum chinense Jacq.) in India. PMID:33635470
Virxicon: A Lexicon Of Viral Sequences. PMID:33367605
Efficient Confirmation of Plant Viral Proteins and Identification of Specific Viral Strains by nanoLC-ESI-Q-TOF Using Single-Leaf-Tissue Samples. PMID:33228257
Network Analysis of the Papaya Orchard Virome from Two Agroecological Regions of Chiapas, Mexico. PMID:31937673
A Novel Interaction Network Used by Potyviruses in Virus-Host Interactions at the Protein Level. PMID:31847316
Transcriptomic analyses reveal physiological changes in sweet orange roots affected by citrus blight. PMID:31829190
Detection and Characterization of Cucumis melo Cryptic Virus, Cucumis melo Amalgavirus 1, and Melon Necrotic Spot Virus in Cucumis melo. PMID:30669373
Peach RNA viromes in six different peach cultivars. PMID:29382911
The Luteovirus P4 Movement Protein Is a Suppressor of Systemic RNA Silencing. PMID:28994713
Small RNAs from Bemisia tabaci Are Transferred to Solanum lycopersicum Phloem during Feeding. PMID:27933079
SeeHaBITaT: A server on bioinformatics applications for Tospoviruses and other species. PMID:27354938
Post-translational control of genetic circuits using Potyvirus proteases. PMID:27298256
Analysis of potato virus Y coat protein epitopes recognized by three commercial monoclonal antibodies. PMID:25542005
Unraveling the web of viroinformatics: computational tools and databases in virus research. PMID:25428870
Cross-kingdom sequence similarities between human micro-RNAs and plant viruses. PMID:24228136
Sirevirus LTR retrotransposons: phylogenetic misconceptions in the plant world. PMID:23452336
ViralZone: recent updates to the virus knowledge resource. PMID:23193299
ViralZone: a knowledge resource to understand virus diversity. PMID:20947564
Microfluidic fabrication of hydrogel microparticles containing functionalized viral nanotemplates. PMID:20695589
Plant microRNAs and their role in defense against viruses: a bioinformatics approach. PMID:20594353
A study in entire chromosomes of violations of the intra-strand parity of complementary nucleotides (Chargaff's second parity rule). PMID:19861381
Identification and characterization of a novel Tritimovirus species isolated from wild Trisetum flavescens L., family Poaceae. PMID:19533320
Genome Information Broker for Viruses (GIB-V): database for comparative analysis of virus genomes. PMID:17158166 - http://dx.doi.org/10.1093/nar/gkj023
Tags:
Tags
More detailed information about this field from each metasource.
classification
metasource: Fairsharing.org
version: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
gene
metasource: Fairsharing.org
version: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
sequence annotation
metasource: Fairsharing.org
version: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
taxonomic classification
metasource: Fairsharing.org
version: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
viral genome databases
metasource: Nucleic Acid Research database catalogue
version: extracted_at: 2022-11-04T11:16:25.468657
virology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:07.039456
plant biology
metasource: bio.tools
version: extracted_at: 2022-11-04T11:27:07.039456
Tags
More detailed information about this field from each metasource.
classification
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
gene
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
sequence annotation
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
taxonomic classification
metasource: Fairsharing.orgversion: FAIRsharing.org: DPVweb; Description of Plant Viruses; DOI: https://doi.org/10.25504/FAIRsharing.52qw6p; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:06 p.m.
genomics databases (non-vertebrate)
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
viral genome databases
metasource: Nucleic Acid Research database catalogueversion: extracted_at: 2022-11-04T11:16:25.468657
virology
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:07.039456
plant biology
metasource: bio.toolsversion: extracted_at: 2022-11-04T11:27:07.039456
classification gene sequence annotation taxonomic classification genomics viral genome virology plant biology
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