CircFunBase

Database that aims to provide a high-quality functional circRNA resource including experimentally validated and computationally predicted functions.

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Publications

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CircFunBase: a database for functional circular RNAs
PMID: 30715276

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:46.505178

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• CircFunBase: a database for functional circular RNAs PubMed citations: 38.

  38 articles citing: CircFunBase: a database for functional circular RNAs

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  Advances in Non-Coding RNA Sequencing. PMID:34842804

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  CRPGCN: predicting circRNA-disease associations using graph convolutional network based on heterogeneous network. PMID:34772332

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  From circRNAs to fusion circRNAs in hematological malignancies. PMID:34747369

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  Hsa_circ_0004296 inhibits metastasis of prostate cancer by interacting with EIF4A3 to prevent nuclear export of ETS1 mRNA. PMID:34696782

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  Circular RNAs in cardiovascular diseases. PMID:34592203

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  SRCP: a comprehensive pipeline for accurate annotation and quantification of circRNAs. PMID:34556162

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  A genome-wide circular RNA transcriptome in rat. PMID:34527809

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  GATNNCDA: A Method Based on Graph Attention Network and Multi-Layer Neural Network for Predicting circRNA-Disease Associations. PMID:34445212

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  Circular RNAs and complex diseases: from experimental results to computational models. PMID:34329377

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  CircRNA circFOXK2 facilitates oncogenesis in breast cancer via IGF2BP3/miR-370 axis. PMID:34329193

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  MSCFS: inferring circRNA functional similarity based on multiple data sources. PMID:34271851

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  Hints From the Cellular Functions to the Practical Outlook of Circular RNAs. PMID:34220952

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  The pleiotropic roles of circular and long noncoding RNAs in cutaneous melanoma. PMID:34080276

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  NoRCE: non-coding RNA sets cis enrichment tool. PMID:34078267

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  Cancer-Associated circRNA-miRNA-mRNA Regulatory Networks: A Meta-Analysis. PMID:34055888

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  Circular RNAs and Hepatocellular Carcinoma: New Epigenetic Players With Diagnostic and Prognostic Roles. PMID:33959506

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  Approaches to Identify and Characterise the Post-Transcriptional Roles of lncRNAs in Cancer. PMID:33803328

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  Efficient deletion of multiple circle RNA loci by CRISPR-Cas9 reveals Os06circ02797 as a putative sponge for OsMIR408 in rice. PMID:33440058

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  Cerina: systematic circRNA functional annotation based on integrative analysis of ceRNA interactions. PMID:33335165

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  Circular RNAs Are Regulators of Diverse Animal Transcriptomes: One Health Perspective. PMID:33193584

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  Seeing Is Believing: Visualizing Circular RNAs. PMID:33187156

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  CircR2Cancer: a manually curated database of associations between circRNAs and cancers. PMID:33181824

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  Disease-Associated Circular RNAs: From Biology to Computational Identification. PMID:32908906

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  Circular RNAs in Sepsis: Biogenesis, Function, and Clinical Significance. PMID:32630422

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  Characterization and Function of Circular RNAs in Plants. PMID:32509801

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  iCDA-CGR: Identification of circRNA-disease associations based on Chaos Game Representation. PMID:32421715

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  Circular RNAs and their participation in stemness of cancer. PMID:32266486

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  The Regulatory Functions of Circular RNAs in Digestive System Cancers. PMID:32213977

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  A New World of Biomarkers and Therapeutics for Female Reproductive System and Breast Cancers: Circular RNAs. PMID:32211400

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  PncStress: a manually curated database of experimentally validated stress-responsive non-coding RNAs in plants. PMID:32185394

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  circRNAs Signature as Potential Diagnostic and Prognostic Biomarker for Diabetes Mellitus and Related Cardiovascular Complications. PMID:32182790

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  The bioinformatics toolbox for circRNA discovery and analysis. PMID:32103237

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  Circular RNAs as diagnostic tool for renal transplant patients with acute rejection. PMID:32016021

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  Closing the circle: current state and perspectives of circular RNA databases. PMID:31998941

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  Circular RNAs-The Road Less Traveled. PMID:31998746

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  Docker4Circ: A Framework for the Reproducible Characterization of circRNAs from RNA-Seq Data. PMID:31906249

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  Small noncoding RNA discovery and profiling with sRNAtools based on high-throughput sequencing. PMID:31885040

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  Circular RNAs: A Novel Class of Functional RNA Molecules with a Therapeutic Perspective. PMID:31324392

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functional, regulatory and non-coding rna

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:46.505178

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molecular interactions, pathways and networks

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:46.505178

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gene transcripts

metasource: bio.tools
version: extracted_at: 2022-11-04T11:30:46.505178

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functional, regulatory and non-coding rna molecular interactions, pathways and networks gene transcripts