AddictedChem: A Data-Driven Integrated Platform for New Psychoactive Substance Identification.
PMID:35745053
Past and future uses of text mining in ecology and evolution.
PMID:35582795
MeFSAT: a curated natural product database specific to secondary metabolites of medicinal fungi.
PMID:35424258
MCRWR: a new method to measure the similarity of documents based on semantic network.
PMID:35105306
In Silico Investigation of the Biological Implications of Complex DNA Damage with Emphasis in Cancer Radiotherapy through a Systems Biology Approach.
PMID:34946681
NPClassifier: A Deep Neural Network-Based Structural Classification Tool for Natural Products.
PMID:34662515
Disease ontologies for knowledge graphs.
PMID:34289807
Antiviral Activity of Metabolites from Peruvian Plants against SARS-CoV-2: An In Silico Approach.
PMID:34202092
An Explainable Multimodal Neural Network Architecture for Predicting Epilepsy Comorbidities Based on Administrative Claims Data.
PMID:34095818
Authorship Patterns in Cancer Genomics Publications Across Africa.
PMID:34033494
Diagnosis of Alzheimer's Disease in Developed and Developing Countries: Systematic Review and Meta-Analysis of Diagnostic Test Accuracy.
PMID:33681713
The glycoconjugate ontology (GlycoCoO) for standardizing the annotation of glycoconjugate data and its application.
PMID:33677548
Artificial Intelligence in Drug Discovery: A Comprehensive Review of Data-driven and Machine Learning Approaches.
PMID:33437151
CERC: an interactive content extraction, recognition, and construction tool for clinical and biomedical text.
PMID:33323109
Systematic classification of unknown metabolites using high-resolution fragmentation mass spectra.
PMID:33230292
A realism-based approach to an ontological representation of symbiotic interactions.
PMID:33032576
New developments in RiPP discovery, enzymology and engineering.
PMID:32935693
Network-principled deep generative models for designing drug combinations as graph sets.
PMID:32657357
The articles.ELM resource: simplifying access to protein linear motif literature by annotation, text-mining and classification.
PMID:32507889
TarGo: network based target gene selection system for human disease related mouse models.
PMID:32257911
A Computational Approach for Mapping Heme Biology in the Context of Hemolytic Disorders.
PMID:32211383
The TargetMine Data Warehouse: Enhancement and Updates.
PMID:31649722
Key challenges facing data-driven multicellular systems biology.
PMID:31648301
Molecular modelling and docking of Mus musculus HMGB1 inflammatory protein with CGA.
PMID:31485132
Resources for assigning MeSH IDs to Japanese medical terms.
PMID:31307131
Re-curation and rational enrichment of knowledge graphs in Biological Expression Language.
PMID:31225582
Curating gene sets: challenges and opportunities for integrative analysis.
PMID:30888410
Synthetic lethal combinations of low-toxicity drugs for breast cancer identified in silico by genetic screens in yeast.
PMID:30555636
Integrating molecular networks with genetic variant interpretation for precision medicine.
PMID:30548534
Connecting nutrition composition measures to biomedical research.
PMID:30541615
Multimodal network diffusion predicts future disease-gene-chemical associations.
PMID:30304494
PubChem chemical structure standardization.
PMID:30097821
ClinVar Miner: Demonstrating utility of a Web-based tool for viewing and filtering ClinVar data.
PMID:29790234
IMPPAT: A curated database of Indian Medicinal Plants, Phytochemistry And Therapeutics.
PMID:29531263
LIVIVO - the Vertical Search Engine for Life Sciences.
PMID:29368755
DataMed - an open source discovery index for finding biomedical datasets.
PMID:29346583
Biotea: semantics for Pubmed Central.
PMID:29312824
DISNOR: a disease network open resource.
PMID:29036667
Lessons from a decade of individual-based models for infectious disease transmission: a systematic review (2006-2015).
PMID:28893198
Phelan-McDermid syndrome data network: Integrating patient reported outcomes with clinical notes and curated genetic reports.
PMID:28862395
Knowledge base and mini-expert platform for the diagnosis of inborn errors of metabolism.
PMID:28726811
CodeMapper: semiautomatic coding of case definitions. A contribution from the ADVANCE project.
PMID:28657162
The druggable genome and support for target identification and validation in drug development.
PMID:28356508
A 30-year bibliometric analysis of research coverage on HIV and AIDS in Lesotho.
PMID:28320397
Analysis of the time and workers needed to conduct systematic reviews of medical interventions using data from the PROSPERO registry.
PMID:28242767
ClassyFire: automated chemical classification with a comprehensive, computable taxonomy.
PMID:27867422
Systematic Analysis of Drug Targets Confirms Expression in Disease-Relevant Tissues.
PMID:27824084
Training and evaluation corpora for the extraction of causal relationships encoded in biological expression language (BEL).
PMID:27554092
A network based approach to drug repositioning identifies plausible candidates for breast cancer and prostate cancer.
PMID:27475327
Representing and querying disease networks using graph databases.
PMID:27462371
Resistance to anti-VEGF therapy in neovascular age-related macular degeneration: a comprehensive review.
PMID:27330279
An Integrated Data Driven Approach to Drug Repositioning Using Gene-Disease Associations.
PMID:27196054
VenomKB, a new knowledge base for facilitating the validation of putative venom therapies.
PMID:26601758
PharmDB-K: Integrated Bio-Pharmacological Network Database for Traditional Korean Medicine.
PMID:26555441
RNASeqMetaDB: a database and web server for navigating metadata of publicly available mouse RNA-Seq datasets.
PMID:26323714
IMG-ABC: A Knowledge Base To Fuel Discovery of Biosynthetic Gene Clusters and Novel Secondary Metabolites.
PMID:26173699
Preparing a collection of radiology examinations for distribution and retrieval.
PMID:26133894
PGMD: a comprehensive manually curated pharmacogenomic database.
PMID:25939485
PolySearch2: a significantly improved text-mining system for discovering associations between human diseases, genes, drugs, metabolites, toxins and more.
PMID:25925572
Generating a focused view of disease ontology cancer terms for pan-cancer data integration and analysis.
PMID:25841438
The COPD Knowledge Base: enabling data analysis and computational simulation in translational COPD research.
PMID:25471253
Medical subject headings (MeSH) terms.
PMID:25298548
A random set scoring model for prioritization of disease candidate genes using protein complexes and data-mining of GeneRIF, OMIM and PubMed records.
PMID:25253562
Zn-responsive proteome profiling and time-dependent expression of proteins regulated by MTF-1 in A549 cells.
PMID:25162517
Toward a common language for biobanking.
PMID:24713663
Attention to local health burden and the global disparity of health research.
PMID:24691431
Building a common pediatric research terminology for accelerating child health research.
PMID:24534404
BioHackathon series in 2011 and 2012: penetration of ontology and linked data in life science domains.
PMID:24495517
Feasibility of feature-based indexing, clustering, and search of clinical trials. A case study of breast cancer trials from ClinicalTrials.gov.
PMID:23666475
Leveraging concept-based approaches to identify potential phyto-therapies.
PMID:23665360
The network organization of cancer-associated protein complexes in human tissues.
PMID:23567845
RegTransBase--a database of regulatory sequences and interactions based on literature: a resource for investigating transcriptional regulation in prokaryotes.
PMID:23547897
Network analysis of endogenous gene expression profiles after polyethyleneimine-mediated DNA delivery.
PMID:23526566
Cluster and propensity based approximation of a network.
PMID:23497424
Type 2 diabetes risk alleles demonstrate extreme directional differentiation among human populations, compared to other diseases.
PMID:22511877
Information from Searching Content with an Ontology-Utilizing Toolkit (iSCOUT).
PMID:22349993
Benchmarking ontologies: bigger or better?
PMID:21249231
PhenoGO: an integrated resource for the multiscale mining of clinical and biological data.
PMID:19208196
Forty years of SNOMED: a literature review.
PMID:19007439
PhenoGO: assigning phenotypic context to gene ontology annotations with natural language processing.
PMID:17094228
Medical Subject Headings (MeSH).
PMID:10928714