Tag: human biology


Found 54 sources
Source Match ReputationScore*

IUPHAR/BPS Guide to PHARMACOLOGY


The information in the database is presented at two levels: the initial view or landing pages for each target family provide expert-curated overviews of the key properties and selective ligands and tool compounds available. For selected targets more ...
100%

HUGO Gene Nomenclature Committee


HGNC is responsible for approving unique symbols and names for human loci, including protein coding genes, ncRNA genes and pseudogenes, to allow unambiguous scientific communication.
78%

Human Protein Reference Database


The Human Protein Reference Database represents a centralized platform to visually depict and integrate information pertaining to domain architecture, post-translational modifications, interaction networks and disease association for each protein in ...
76%

JASPAR


JASPAR (http://jaspar.genereg.net) is an open-access database of curated, non-redundant transcription factor (TF)-binding profiles stored as position frequency matrices (PFMs) and TF flexible models (TFFMs) for TFs across multiple species in six taxo ...
74%

ClinVar


ClinVar is a freely accessible, public archive of reports of the relationships among human variations and phenotypes, with supporting evidence. ClinVar thus facilitates access to and communication about the relationships asserted between human variat ...
71%

Pharmacogenomics Knowledge Base


PharmGKB is a resource that provides information about how human genetic variation affects response to medications. PharmGKB collects, curates and disseminates knowledge about clinically actionable gene-drug associations and genotype-phenotype relati ...
71%

PCR Primer Database for Gene Expression Detection and Quantification


PrimerBank is a public resource for PCR primers. These primers are designed for gene expression detection or quantification (real-time PCR). PrimerBank contains over 306,800 primers covering most known human and mouse genes. There are several ways to ...
66%

Interologous Interaction Database


I2D (Interologous Interaction Database) is a database of known and predicted mammalian and eukaryotic protein-protein interactions (PPIs).
62%

Mammalian Gene Collection


Overview The NIH Mammalian Gene Collection (MGC) program is a multi-institutional effort to identify and sequence cDNA clones containing a full-length open reading frame (FL-ORF) for human, mouse, and rat genes. To date, the MGC has produced over 324 ...
60%

Database of Bacterial Exotoxins for Human


DBETH is the Database of Bacterial Exotoxins for Human. The aim of this database is to assemble information on the toxins responsible for causing bacterial pathogenesis in humans.
59%

H-Invitational Database


H-Invitational Database (H-InvDB) is an integrated database of human genes and transcripts. By extensive analyses of all human transcripts, we provide curated annotations of human genes and transcripts that include gene structures, alternative splici ...
58%

Ensembl Mouse Genome Browser


Analysis of finished and draft mouse genomic clone sequences.
57%

Ensembl Drosophila Genome Browser


Access to the Fly genome through the Ensembl user interface (both for visualisation and data mining).
57%

Ensembl Zebrafish Genome Browser


This ensembl website features the zebrafish whole genome shotgun assembly sequence.
57%

Ensembl Rat Genome Browser


The Rat Genome project is an international collaboration to sequence the genome of the brown rat (Rattus norvegicus).
57%

Ensembl Fugu Genome Browser


Fugu Ensembl is a joint project between The IMCB and the EMBL - EBI to produce and maintain an automatic annotation of the Fugu Genome.
57%

Ensembl C.elegans Genome Browser


Access the data through the Ensembl user interface (both for visualisation and data mining) to provide cross-species integration throughout Ensembl's comparative genomics resources.
57%

HGMD


The Human Gene Mutation Database (HGMD) - comprehensive collection of germline mutations in nuclear genes that underlie, or are associated with, human inherited disease. It is a flexible resource that can be adapted to a broad range of applications i ...
56%

HPO


The Human Phenotype Ontology (HPO) aims to provide a standardized vocabulary of phenotypic abnormalities encountered in human disease. It can be used for clinical diagnostics in human genetics, bioinformatics research on the relationships between hum ...
52%

Network of Cancer Genes


The Network of Cancer Genes (NCG) contains information on duplicability, evolution, protein-protein and microRNA-gene interaction, function, expression and essentiality of cancer genes from manually curated publications . NCG also provides informatio ...
52%

The Chromosome 7 Annotation Project


The objective of this project is to generate the most comprehensive description of human chromosome 7 to facilitate biological discovery, disease gene research and medical genetic applications.
51%

Human Histone Database


HIstome (Human histone database) is a freely available, specialist, electronic database dedicated to display information about human histone variants, sites of their post-translational modifications and about various histone modifying enzymes.
51%

SOURCE


The explosion in the number of functional genomic datasets generated with tools such as DNA microarrays has created a critical need for resources that facilitate the interpretation of large-scale biological data. SOURCE is a web-based database that b ...
51%

Signaling Pathway Integrated Knowledge Engine


SPIKE (Signaling Pathway Integrated Knowledge Engine) is an interactive software environment that graphically displays biological signaling networks, allows dynamic layout and navigation through these networks, and enables the superposition of DNA mi ...
50%

VBASE2


VBASE2 is an integrative database of germ-line variable genes from the immunoglobulin loci of human and mouse. All variable gene sequences are extracted from the EMBL-Bank.
50%

dbSUPER


dbSUPER is the first integrated and interactive database of super-enhancers, which contains 82234 super-enhancers in 102 human and 25 mouse tissue/cell types.
49%

Gene Expression Barcode


Gene expression data sorted into two groups: expressed and not expressed genes
48%

Geneimprint


Catalogue of genes (from different species including human) that contains general information about a gene as well as whether it is imprinted and which allele is expressed.
47%

Cell Line Integrated Molecular Authentication Database


CLIMA 2 is the result of an integration effort aimed at including all certified STR profiles of human cell lines in a unique database. The contents of the database are dynamically summarized (i.e., they are always up-to-date) in a table in the home p ...
47%

Database of Differentially Expressed Proteins in Human Cancer


The dbDEPC is a database of differentially expressed proteins in human cancers.
46%

Human Disease-Related Viral Integration Sites


Dr.VIS collects and locates human disease-related viral integration sites. So far, about 600 sites covering 5 virus organisms and 11 human diseases are available. Integration sites in Dr.VIS are located against chromesome, cytoband, gene and refseq p ...
45%

BGMUT


Blood Group Antigen Gene Mutation Database
45%

PhenoDigm


Analyzing curated annotations to associate animal models with human diseases.
44%

COLT-Cancer


Essential gene profiles in human cancer cell lines
44%

LincSNP


Association of human lncRNAs with disease-related SNPs
44%

GenAtlas


GenAtlas is a database containing information on human genes, markers and phenotypes.
43%

Human Unidentified Gene-Encoded large proteins database


HUGE is a database for human large proteins newly identified in the Kazusa cDNA project, the aim of which is to predict the primary structure of proteins from the sequences of human large cDNAs (>4 kb).
43%

InvFEST


Polymorphic inversions in the human genome
43%

HGVbase


Attempt to summarize all known sequence variations in the human genome, to facilitate research into how genotypes affect common diseases, drug responses, and other complex phenotypes.
42%

TFcheckpoint


Curated compendium of specific DNA-binding RNA polymerase II transcription factors.
42%

PolyQ


Polyglutamine Repeats in Proteins
42%

RSSsite


Reference database and prediction tool for the identification of cryptic recombination signal sequences (RSSs) in the human and mouse genomes.
41%

PICKLE


A human protein-protein interaction meta-database employing primary dataset integration via genetic information ontology, which allows the integrated network to be reversibly normalized to any level of genetic reference without loss of source informa ...
41%

CADRE Genomes Browser


Public resource for genomic data extracted from species of Aspergillus. Array of online tools for searching and visualizing features are available.
41%

SAHG


Structural Atlas of Human Genome
41%

Mediterranean Founder Mutation Database


A comprehensive database established to offer a web-based access to founder mutation data in Mediterranean population. The database provides an overview about the spectrum of founder mutations found in Mediterranean population to the scientific commu ...
39%

PDID


Database of molecular-level putative protein-drug interactions in the structural human proteome.
39%

Pedican


An online gene resource for pediatric cancers with literature evidence.
38%

Tabloid Proteome


an annotated database of protein associations. Tabloid Proteome is a database of protein association network generated using publically available mass spectrometry based experiments in PRIDE.These associations represent a broad scala of biological a ...
38%

PGG SNV


PGG SNV is a database for understanding evolutionary and medical implications of human single nucleotide variations in diverse populations. The tool provides useful web tools for figure illustration. Users can upload their local files with specific f ...
37%

HDAM


A resource of human disease associated mutations from next generation sequencing studies.
37%

SCLD


User-editable lineage maps illustrating both endogenous development and the directed differentiation of human and mouse embryonic stem cells.
36%

HAMdb


Database of human autophagy modulators with specific pathway and disease information.
33%

GeneSNPs


Gene-centric map of the genome structure, coding sequences, and identified allelic variation in genes being targeted for a role in disease susceptibility by the NIEHS (National Institute of Evironmental Health Sciences). This database provides a grap ...
33%

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