PRofils pour l'Identification Automatique du Metabolisme
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PRofils pour l'Identification Automatique du Metabolisme
metasource: Fairsharing.org
version: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
PRIAM
metasource: Fairsharing.org
version: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Names
More detailed information about this field from each metasource.
PRofils pour l'Identification Automatique du Metabolisme
metasource: Fairsharing.orgversion: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
PRIAM
metasource: Fairsharing.orgversion: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Names
More detailed information about this field from each metasource.
PRofils pour l'Identification Automatique du Metabolisme
metasource: Fairsharing.orgversion: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
PRIAM
metasource: Fairsharing.orgversion: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
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In English, PRIAM stands for enzyme-specific profiles for metabolic pathway prediction. PRIAM is a method for automated enzyme detection in a fully sequenced genome, based on all sequences available in the ENZYME database.
Description
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In English, PRIAM stands for enzyme-specific profiles for metabolic pathway prediction. PRIAM is a method for automated enzyme detection in a fully sequenced genome, based on all sequences available in the ENZYME database.
metasource: Fairsharing.orgversion: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Webpage:
http://priam.prabi.fr/Webpage
More detailed information about this field from each metasource.
http://priam.prabi.fr/
metasource: Fairsharing.orgversion: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Publications:
Publications
More detailed information about this field from each metasource.
Enzyme-specific profiles for genome annotation: PRIAM
PMID: 14602924
metasource: Fairsharing.org
version: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Publications
More detailed information about this field from each metasource.
Enzyme-specific profiles for genome annotation: PRIAM
PMID: 14602924
metasource: Fairsharing.org
version: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
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Enzyme-specific profiles for genome annotation: PRIAM
PubMed citations: 178.
178 articles citing: Enzyme-specific profiles for genome annotation: PRIAM
Acetate Degradation at Low pH by the Moderately Acidophilic Sulfate Reducer Acididesulfobacillus acetoxydans gen. nov. sp. nov. PMID:35391737
Genomic convergence between Akkermansia muciniphila in different mammalian hosts. PMID:34715771
Candidatus Kaistella beijingensis sp. nov., Isolated from a Municipal Wastewater Treatment Plant, Is Involved in Sludge Foaming. PMID:34586909
Decreased Abundance of Akkermansia muciniphila Leads to the Impairment of Insulin Secretion and Glucose Homeostasis in Lean Type 2 Diabetes. PMID:34085773
A multi-omic characterization of temperature stress in a halotolerant Scenedesmus strain for algal biotechnology. PMID:33712730
Genomic insights into the host specific adaptation of the Pneumocystis genus. PMID:33686174
Implementation of homology based and non-homology based computational methods for the identification and annotation of orphan enzymes: using Mycobacterium tuberculosis H37Rv as a case study. PMID:33076816
The reductive glycine pathway allows autotrophic growth of Desulfovibrio desulfuricans. PMID:33037220
Identification, Characterization, and Genomic Analysis of Novel Serratia Temperate Phages from a Gold Mine. PMID:32933193
Modeling the metabolic interplay between a parasitic worm and its bacterial endosymbiont allows the identification of novel drug targets. PMID:32779567
Characterization of a SPM-1 metallo-beta-lactamase-producing Pseudomonas aeruginosa by comparative genomics and phenotypic analysis. PMID:32764694
Metagenomic approaches in microbial ecology: an update on whole-genome and marker gene sequencing analyses. PMID:32706331
The genome sequence of the grape phylloxera provides insights into the evolution, adaptation, and invasion routes of an iconic pest. PMID:32698880
Sawfly Genomes Reveal Evolutionary Acquisitions That Fostered the Mega-Radiation of Parasitoid and Eusocial Hymenoptera. PMID:32442304
Identification and Characterization of the First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. PMID:32197547
Drosophila-associated bacteria differentially shape the nutritional requirements of their host during juvenile growth. PMID:32196485
Comparative genomics applied to Mucor species with different lifestyles. PMID:32039703
Genome-Scale Metabolic Reconstruction of Acetobacter pasteurianus 386B, a Candidate Functional Starter Culture for Cocoa Bean Fermentation. PMID:31921009
Casimicrobium huifangae gen. nov., sp. nov., a Ubiquitous "Most-Wanted" Core Bacterial Taxon from Municipal Wastewater Treatment Plants. PMID:31811031
Rewiring of Metabolic Network in Mycobacterium tuberculosis During Adaptation to Different Stresses. PMID:31736886
An in silico survey of Clostridioides difficile extrachromosomal elements . PMID:31526450
Complete Assembly of the Genome of an Acidovorax citrulli Strain Reveals a Naturally Occurring Plasmid in This Species. PMID:31281298
Identification of small molecule enzyme inhibitors as broad-spectrum anthelmintics. PMID:31235822
Deep learning enables high-quality and high-throughput prediction of enzyme commission numbers. PMID:31221760
Characterization of the virome of Paracoccus spp. (Alphaproteobacteria) by combined in silico and in vivo approaches. PMID:31133656
The MACADAM database: a MetAboliC pAthways DAtabase for Microbial taxonomic groups for mining potential metabolic capacities of archaeal and bacterial taxonomic groups. PMID:31032842
Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome. PMID:30935422
Comparative genomics of the major parasitic worms. PMID:30397333
To B or Not to B: Comparative Genomics Suggests Arsenophonus as a Source of B Vitamins in Whiteflies. PMID:30319574
Leveraging single-cell genomics to expand the fungal tree of life. PMID:30297742
Hidden in plain sight-highly abundant and diverse planktonic freshwater Chloroflexi. PMID:30285851
Comparative transcriptomic analyses and single-cell RNA sequencing of the freshwater planarian Schmidtea mediterranea identify major cell types and pathway conservation. PMID:30143032
The genome sequence of the soft-rot fungus Penicillium purpurogenum reveals a high gene dosage for lignocellulolytic enzymes. PMID:30123662
An integrative, multi-omics approach towards the prioritization of Klebsiella pneumoniae drug targets. PMID:30018343
Two New Secreted Proteases Generate a Casein-Derived Antimicrobial Peptide in Bacillus cereus Food Born Isolate Leading to Bacterial Competition in Milk. PMID:29915567
Proteiniphilum saccharofermentans str. M3/6T isolated from a laboratory biogas reactor is versatile in polysaccharide and oligopeptide utilization as deduced from genome-based metabolic reconstructions. PMID:29892569
Studying microbial functionality within the gut ecosystem by systems biology. PMID:29556373
A benzene-degrading nitrate-reducing microbial consortium displays aerobic and anaerobic benzene degradation pathways. PMID:29540736
Network Analyses in Plant Pathogens. PMID:29441045
Multiple losses of photosynthesis and convergent reductive genome evolution in the colourless green algae Prototheca. PMID:29343788
Comparative Genomics Highlights Symbiotic Capacities and High Metabolic Flexibility of the Marine Genus Pseudovibrio. PMID:29319806
Reconstruction of Oryza sativa indica Genome Scale Metabolic Model and Its Responses to Varying RuBisCO Activity, Light Intensity, and Enzymatic Cost Conditions. PMID:29250098
Complete Genome Sequence of Hyperthermophilic Archaeon Thermococcus sp. EXT12c, Isolated from the East Pacific Rise 9°N. PMID:29242226
The enigmatic SAR202 cluster up close: shedding light on a globally distributed dark ocean lineage involved in sulfur cycling. PMID:29208946
The MAR databases: development and implementation of databases specific for marine metagenomics. PMID:29106641
Genomic and functional analysis of Romboutsia ilealis CRIBT reveals adaptation to the small intestine. PMID:28924494
FunctionAnnotator, a versatile and efficient web tool for non-model organism annotation. PMID:28874813
Aspergillus niger Secretes Citrate to Increase Iron Bioavailability. PMID:28824560
BrEPS 2.0: Optimization of sequence pattern prediction for enzyme annotation. PMID:28750104
Draft Genome Sequence of Actinomycessucciniciruminis Strain Am4T, Isolated from Cow Rumen Fluid. PMID:28729282
ELIXIR pilot action: Marine metagenomics - towards a domain specific set of sustainable services. PMID:28620454
Comparative proteomics of Rhizopus delemar ATCC 20344 unravels the role of amino acid catabolism in fumarate accumulation. PMID:28382234
Improving transcriptome de novo assembly by using a reference genome of a related species: Translational genomics from oil palm to coconut. PMID:28334050
Genomics of apicomplexan parasites. PMID:28276701
Genome-Wide Prediction of Metabolic Enzymes, Pathways, and Gene Clusters in Plants. PMID:28228535
Complete Genome Sequence of Akkermansia glycaniphila Strain PytT, a Mucin-Degrading Specialist of the Reticulated Python Gut. PMID:28057747
The quality of metabolic pathway resources depends on initial enzymatic function assignments: a case for maize. PMID:27899149
Draft Genome Sequence of a Multi-Metal Resistant Bacterium Pseudomonas putida ATH-43 Isolated from Greenwich Island, Antarctica. PMID:27877169
The genome of Onchocerca volvulus, agent of river blindness. PMID:27869790
Comparative genomics provides new insights into the diversity, physiology, and sexuality of the only industrially exploited tremellomycete: Phaffia rhodozyma. PMID:27829365
Comparative genomics of biotechnologically important yeasts. PMID:27535936
COMAN: a web server for comprehensive metatranscriptomics analysis. PMID:27515514
Genome Sequences of Multiresistant Staphylococcus capitis Pulsotype NRCS-A and Methicillin-Susceptible S. capitis Pulsotype NRCS-C. PMID:27284154
Complete genome sequence of the haloalkaliphilic, obligately chemolithoautotrophic thiosulfate and sulfide-oxidizing γ-proteobacterium Thioalkalimicrobium cyclicum type strain ALM 1 (DSM 14477(T)). PMID:27274784
ArthropodaCyc: a CycADS powered collection of BioCyc databases to analyse and compare metabolism of arthropods. PMID:27242037
Genomic insights into members of the candidate phylum Hyd24-12 common in mesophilic anaerobic digesters. PMID:27058503
Genomic and in situ investigations of the novel uncultured Chloroflexi associated with 0092 morphotype filamentous bulking in activated sludge. PMID:26905629
Probiotics modulated gut microbiota suppresses hepatocellular carcinoma growth in mice. PMID:26884164
Discovery and Characterization of a Thermostable and Highly Halotolerant GH5 Cellulase from an Icelandic Hot Spring Isolate. PMID:26741138
Whole genome sequence and manual annotation of Clostridium autoethanogenum, an industrially relevant bacterium. PMID:26692227
De novo assembly and functional annotation of Myrciaria dubia fruit transcriptome reveals multiple metabolic pathways for L-ascorbic acid biosynthesis. PMID:26602763
Complete Genome Sequence of Thermus aquaticus Y51MC23. PMID:26465632
Genome sequence of Anoxybacillus ayderensis AB04(T) isolated from the Ayder hot spring in Turkey. PMID:26413199
Genome-guided insight into the methylotrophy of Paracoccus aminophilus JCM 7686. PMID:26347732
Suberin Regulates the Production of Cellulolytic Enzymes in Streptomyces scabiei, the Causal Agent of Potato Common Scab. PMID:26330095
Genome Sequences of Four Staphylococcus capitis NRCS-A Isolates from Geographically Distant Neonatal Intensive Care Units. PMID:26251481
Draft genome sequence and characterization of Desulfitobacterium hafniense PCE-S. PMID:26203328
Diversity and role of plasmids in adaptation of bacteria inhabiting the Lubin copper mine in Poland, an environment rich in heavy metals. PMID:26074880
Co-cultivation and transcriptome sequencing of two co-existing fish pathogens Moritella viscosa and Aliivibrio wodanis. PMID:26059548
TRUFA: A User-Friendly Web Server for de novo RNA-seq Analysis Using Cluster Computing. PMID:26056424
Pan-phylum Comparison of Nematode Metabolic Potential. PMID:26000881
The enzymatic nature of an anonymous protein sequence cannot reliably be inferred from superfamily level structural information alone. PMID:25559918
Integrative workflows for metagenomic analysis. PMID:25478562
Pseudomonas aeruginosa Genome Evolution in Patients and under the Hospital Environment. PMID:25437802
Plasmids of psychrophilic and psychrotolerant bacteria and their role in adaptation to cold environments. PMID:25426110
Helminth.net: expansions to Nematode.net and an introduction to Trematode.net. PMID:25392426
The coffee genome hub: a resource for coffee genomes. PMID:25392413
Comparative genomics of pneumocystis species suggests the absence of genes for myo-inositol synthesis and reliance on inositol transport and metabolism. PMID:25370490
Comparative genomics of nucleotide metabolism: a tour to the past of the three cellular domains of life. PMID:25230797
EC2KEGG: a command line tool for comparison of metabolic pathways. PMID:25202338
Non-contiguous finished genome sequence of Staphylococcus capitis CR01 (pulsetype NRCS-A). PMID:25197487
PlantCAZyme: a database for plant carbohydrate-active enzymes. PMID:25125445
A novel eliminase from a marine bacterium that degrades hyaluronan and chondroitin sulfate. PMID:25122756
Comparative genomics suggests that the human pathogenic fungus Pneumocystis jirovecii acquired obligate biotrophy through gene loss. PMID:25062922
Whole-genome sequencing reveals clonal expansion of multiresistant Staphylococcus haemolyticus in European hospitals. PMID:25038069
Comparative secretome analysis of Streptomyces scabiei during growth in the presence or absence of potato suberin. PMID:25028574
Genome and transcriptome sequencing identifies breeding targets in the orphan crop tef (Eragrostis tef). PMID:25007843
Profiling the orphan enzymes. PMID:24906382
Towards integrative gene functional similarity measurement. PMID:24564710
Architecture and functions of a multipartite genome of the methylotrophic bacterium Paracoccus aminophilus JCM 7686, containing primary and secondary chromids. PMID:24517536
Prediction of detailed enzyme functions and identification of specificity determining residues by random forests. PMID:24416252
Reconstruction of the lipid metabolism for the microalga Monoraphidium neglectum from its genome sequence reveals characteristics suitable for biofuel production. PMID:24373495
Enzyme reaction annotation using cloud techniques. PMID:24222895
Analytical tools and databases for metagenomics in the next-generation sequencing era. PMID:24124405
The genome and transcriptome of the enteric parasite Entamoeba invadens, a model for encystation. PMID:23889909
MetaPathways: a modular pipeline for constructing pathway/genome databases from environmental sequence information. PMID:23800136
The banana genome hub. PMID:23707967
Genome Sequence of Lactobacillus plantarum Strain UCMA 3037. PMID:23704179
Partial venom gland transcriptome of a Drosophila parasitoid wasp, Leptopilina heterotoma, reveals novel and shared bioactive profiles with stinging Hymenoptera. PMID:23688557
Genome sequencing of the plant pathogen Taphrina deformans, the causal agent of peach leaf curl. PMID:23631913
Genomic and enzymatic results show Bacillus cellulosilyticus uses a novel set of LPXTA carbohydrases to hydrolyze polysaccharides. PMID:23593409
Tyrosine pathway regulation is host-mediated in the pea aphid symbiosis during late embryonic and early larval development. PMID:23575215
The complete genome sequence of the plant growth-promoting bacterium Pseudomonas sp. UW4. PMID:23516524
Characterization of Halomonas sp. ZM3 isolated from the Zelazny Most post-flotation waste reservoir, with a special focus on its mobile DNA. PMID:23497212
Sequencing and annotation of the Ophiostoma ulmi genome. PMID:23496816
Plasmid diversity in arctic strains of Psychrobacter spp. PMID:23479249
The genome sequences of Cellulomonas fimi and "Cellvibrio gilvus" reveal the cellulolytic strategies of two facultative anaerobes, transfer of "Cellvibrio gilvus" to the genus Cellulomonas, and proposal of Cellulomonas gilvus sp. nov. PMID:23342046
FastAnnotator--an efficient transcript annotation web tool. PMID:23281853
DB Dehydrogenase: an online integrated structural database on enzyme dehydrogenase. PMID:23275696
HAMAP in 2013, new developments in the protein family classification and annotation system. PMID:23193261
Comparative genomic analysis and phylogenetic position of Theileria equi. PMID:23137308
The genome of the obligate intracellular parasite Trachipleistophora hominis: new insights into microsporidian genome dynamics and reductive evolution. PMID:23133373
Enzyme informatics. PMID:23116471
Genome sequence of the bacterium Streptomyces davawensis JCM 4913 and heterologous production of the unique antibiotic roseoflavin. PMID:23043000
EFICAz2.5: application of a high-precision enzyme function predictor to 396 proteomes. PMID:22923291
Caldicellulosiruptor core and pangenomes reveal determinants for noncellulosomal thermophilic deconstruction of plant biomass. PMID:22636774
EnzML: multi-label prediction of enzyme classes using InterPro signatures. PMID:22533924
The complete genome sequence of the acarbose producer Actinoplanes sp. SE50/110. PMID:22443545
Plasmid pP62BP1 isolated from an Arctic Psychrobacter sp. strain carries two highly homologous type II restriction-modification systems and a putative organic sulfate metabolism operon. PMID:22392282
UniPathway: a resource for the exploration and annotation of metabolic pathways. PMID:22102589
InterPro in 2011: new developments in the family and domain prediction database. PMID:22096229
In vivo and in silico determination of essential genes of Campylobacter jejuni. PMID:22044676
EnzymeDetector: an integrated enzyme function prediction tool and database. PMID:21943292
Complete genome sequence of the dog commensal and human pathogen Capnocytophaga canimorsus strain 5. PMID:21914877
TheViral MetaGenome Annotation Pipeline(VMGAP):an automated tool for the functional annotation of viral Metagenomic shotgun sequencing data. PMID:21886867
Genome-enabled determination of amino acid biosynthesis in Xanthomonas campestris pv. campestris and identification of biosynthetic pathways for alanine, glycine, and isoleucine by 13C-isotopologue profiling. PMID:21853248
Identification of biofilm matrix-associated proteins from an acid mine drainage microbial community. PMID:21685158
The IGS Standard Operating Procedure for Automated Prokaryotic Annotation. PMID:21677861
ModEnzA: Accurate Identification of Metabolic Enzymes Using Function Specific Profile HMMs with Optimised Discrimination Threshold and Modified Emission Probabilities. PMID:21541071
The complete genome sequence of Fibrobacter succinogenes S85 reveals a cellulolytic and metabolic specialist. PMID:21526192
CycADS: an annotation database system to ease the development and update of BioCyc databases. PMID:21474551
Genome sequence of Streptomyces griseus strain XylebKG-1, an ambrosia beetle-associated actinomycete. PMID:21460079
Genome sequences of the high-acetic acid-resistant bacteria Gluconacetobacter europaeus LMG 18890T and G. europaeus LMG 18494 (reference strains), G. europaeus 5P3, and Gluconacetobacter oboediens 174Bp2 (isolated from vinegar). PMID:21441523
Genome sequence of the stramenopile Blastocystis, a human anaerobic parasite. PMID:21439036
The JCVI standard operating procedure for annotating prokaryotic metagenomic shotgun sequencing data. PMID:21304707
Complete genome sequence of Methanoculleus marisnigri Romesser et al. 1981 type strain JR1. PMID:21304656
Analysis of the peroxiredoxin family: using active-site structure and sequence information for global classification and residue analysis. PMID:21287625
BrEPS: a flexible and automatic protocol to compute enzyme-specific sequence profiles for functional annotation. PMID:21122127
A blueprint of ectoine metabolism from the genome of the industrial producer Halomonas elongata DSM 2581 T. PMID:20849449
Compartmentalization of the Edinburgh Human Metabolic Network. PMID:20649990
Genome sequence of the plant growth promoting endophytic bacterium Enterobacter sp. 638. PMID:20485560
Non-homologous isofunctional enzymes: a systematic analysis of alternative solutions in enzyme evolution. PMID:20433725
MicroScope: a platform for microbial genome annotation and comparative genomics. PMID:20157493
FUNGIpath: a tool to assess fungal metabolic pathways predicted by orthology. PMID:20122162
P2CS: a two-component system resource for prokaryotic signal transduction research. PMID:19604365
The conservation and evolutionary modularity of metabolism. PMID:19523219
Bioprospecting metagenomes: glycosyl hydrolases for converting biomass. PMID:19450243
A unique dual activity amino acid hydroxylase in Toxoplasma gondii. PMID:19277211
A genome-scale metabolic reconstruction of Mycoplasma genitalium, iPS189. PMID:19214212
OxyGene: an innovative platform for investigating oxidative-response genes in whole prokaryotic genomes. PMID:19117520
Genome-scale models of bacterial metabolism: reconstruction and applications. PMID:19067749
Metagenome analysis of an extreme microbial symbiosis reveals eurythermal adaptation and metabolic flexibility. PMID:18987310
metaTIGER: a metabolic evolution resource. PMID:18953037
MADIBA: a web server toolkit for biological interpretation of Plasmodium and plant gene clusters. PMID:18307768
The development of PIPA: an integrated and automated pipeline for genome-wide protein function annotation. PMID:18221520
Enzymic approach to eurythermalism of Alvinella pompejana and its episymbionts. PMID:18083873
The integrated microbial genomes (IMG) system in 2007: data content and analysis tool extensions. PMID:17933782
Genome sequencing reveals complex secondary metabolome in the marine actinomycete Salinispora tropica. PMID:17563368
A tale of two oxidation states: bacterial colonization of arsenic-rich environments. PMID:17432936
metaSHARK: a WWW platform for interactive exploration of metabolic networks. PMID:16845107
MaGe: a microbial genome annotation system supported by synteny results. PMID:16407324
Coping with cold: the genome of the versatile marine Antarctica bacterium Pseudoalteromonas haloplanktis TAC125. PMID:16169927
metaSHARK: software for automated metabolic network prediction from DNA sequence and its application to the genomes of Plasmodium falciparum and Eimeria tenella. PMID:15745999
The genome of the heartwater agent Ehrlichia ruminantium contains multiple tandem repeats of actively variable copy number. PMID:15637156
EFICAz: a comprehensive approach for accurate genome-scale enzyme function inference. PMID:15576349
Unique features revealed by the genome sequence of Acinetobacter sp. ADP1, a versatile and naturally transformation competent bacterium. PMID:15514110
Human cytomegalovirus carries a cell-derived phospholipase A2 required for infectivity. PMID:15220446
A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases. PMID:15189570
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enzyme
metasource: Fairsharing.org
version: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
pathway model
metasource: Fairsharing.org
version: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
Tags
More detailed information about this field from each metasource.
enzyme
metasource: Fairsharing.orgversion: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
pathway model
metasource: Fairsharing.orgversion: FAIRsharing.org: PRIAM; PRofils pour l'Identification Automatique du Metabolisme; DOI: https://doi.org/10.25504/FAIRsharing.bdv7z3; Last edited: April 26, 2021, 2:50 p.m.; Last accessed: Jan 03 2022 7:07 p.m.
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